RNA–Protein interactions for RNA: ENST00000537002.5

PTPRD-213, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 8,224 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-213ENST00000537002 CMTM6Q9NX76 183 aa5.33□□□□□ -1.56
PTPRD-213ENST00000537002 KLK14Q9P0G3 267 aa5.33□□□□□ -1.56
PTPRD-213ENST00000537002 ABCD2Q9UBJ2 740 aa5.33□□□□□ -1.56
PTPRD-213ENST00000537002 EIF3KQ9UBQ5 218 aaKnown RBP5.33□□□□□ -1.56
PTPRD-213ENST00000537002 NAALAD2Q9Y3Q0 740 aa5.33□□□□□ -1.56
PTPRD-213ENST00000537002 TMEM88BA6NKF7 163 aa5.33□□□□□ -1.56
PTPRD-213ENST00000537002 CASKO14936 926 aa5.33□□□□□ -1.56
PTPRD-213ENST00000537002 RGS14O43566 566 aa5.33□□□□□ -1.56
PTPRD-213ENST00000537002 XYLBO75191 536 aa5.33□□□□□ -1.56
PTPRD-213ENST00000537002 UGT2B17O75795 530 aa5.33□□□□□ -1.56
PTPRD-213ENST00000537002 HMGN1P05114 100 aa5.33□□□□□ -1.56
PTPRD-213ENST00000537002 FOSL2P15408 326 aa5.33□□□□□ -1.56
PTPRD-213ENST00000537002 DSG3P32926 999 aa5.33□□□□□ -1.56
PTPRD-213ENST00000537002 SHMT1P34896 483 aa5.33□□□□□ -1.56
PTPRD-213ENST00000537002 CASP3P42574 277 aa5.33□□□□□ -1.56
PTPRD-213ENST00000537002 CRATP43155 626 aa5.33□□□□□ -1.56
PTPRD-213ENST00000537002 POLR2JP52435 117 aaKnown RBP5.33□□□□□ -1.56
PTPRD-213ENST00000537002 UGT2B15P54855 530 aa5.33□□□□□ -1.56
PTPRD-213ENST00000537002 MAZP56270 477 aaKnown RBP5.33□□□□□ -1.56
PTPRD-213ENST00000537002 COL19A1Q14993 1142 aa5.33□□□□□ -1.56
PTPRD-213ENST00000537002 MAPKAPK3Q16644 382 aa5.33□□□□□ -1.56
PTPRD-213ENST00000537002 C11orf96Q7Z7L8 435 aa5.33□□□□□ -1.56
PTPRD-213ENST00000537002 PTRH1Q86Y79 214 aaKnown RBP5.33□□□□□ -1.56
PTPRD-213ENST00000537002 LURAP1LQ8IV03 231 aa5.33□□□□□ -1.56
PTPRD-213ENST00000537002 IZUMO1Q8IYV9 350 aa5.33□□□□□ -1.56
PTPRD-213ENST00000537002 GMCL1P1Q8NEA9 526 aa5.33□□□□□ -1.56
PTPRD-213ENST00000537002 LPCAT1Q8NF37 534 aa5.33□□□□□ -1.56
PTPRD-213ENST00000537002 HCAR2Q8TDS4 363 aa5.33□□□□□ -1.56
PTPRD-213ENST00000537002 TWIST2Q8WVJ9 160 aa5.33□□□□□ -1.56
PTPRD-213ENST00000537002 PLCL2Q9UPR0 1127 aa5.33□□□□□ -1.56
PTPRD-213ENST00000537002 FAM50BQ9Y247 325 aa5.33□□□□□ -1.56
PTPRD-213ENST00000537002 RGPD5Q99666 1765 aa5.33□□□□□ -1.56
PTPRD-213ENST00000537002 CROCCQ5TZA2 2017 aa5.33□□□□□ -1.56
PTPRD-213ENST00000537002 IGKV6D-41A0A0C4DH26 115 aa5.33□□□□□ -1.56
PTPRD-213ENST00000537002 TCAF2A6NFQ2 919 aa5.33□□□□□ -1.56
PTPRD-213ENST00000537002 FAM170BA6NMN3 283 aa5.33□□□□□ -1.56
PTPRD-213ENST00000537002 ASS1P00966 412 aaKnown RBP5.33□□□□□ -1.56
PTPRD-213ENST00000537002 PRKACAP17612 351 aa5.33□□□□□ -1.56
PTPRD-213ENST00000537002 HLA-FP30511 346 aa5.33□□□□□ -1.56
PTPRD-213ENST00000537002 RYKP34925 604 aa5.33□□□□□ -1.56
PTPRD-213ENST00000537002 TNFSF9P41273 254 aa5.33□□□□□ -1.56
PTPRD-213ENST00000537002 TKTL1P51854 596 aa5.33□□□□□ -1.56
PTPRD-213ENST00000537002 FAM187BQ17R55 369 aa5.33□□□□□ -1.56
PTPRD-213ENST00000537002 IER5Q5VY09 327 aa5.33□□□□□ -1.56
PTPRD-213ENST00000537002 HMBOX1Q6NT76 420 aa5.33□□□□□ -1.56
PTPRD-213ENST00000537002 ZNF782Q6ZMW2 699 aaPredicted RBP5.33□□□□□ -1.56
PTPRD-213ENST00000537002 C9orf43Q8TAL5 461 aaPredicted RBP5.33□□□□□ -1.56
PTPRD-213ENST00000537002 AP3S1Q92572 193 aa5.33□□□□□ -1.56
PTPRD-213ENST00000537002 MSANTD3Q96H12 275 aa5.33□□□□□ -1.56
PTPRD-213ENST00000537002 SIGLEC10Q96LC7 697 aa5.33□□□□□ -1.56
PTPRD-213ENST00000537002 GPR63Q9BZJ6 419 aa5.33□□□□□ -1.56
PTPRD-213ENST00000537002 ZNF385DQ9H6B1 395 aa5.33□□□□□ -1.56
PTPRD-213ENST00000537002 SLC39A1Q9NY26 324 aa5.33□□□□□ -1.56
PTPRD-213ENST00000537002 HOXC10Q9NYD6 342 aa5.33□□□□□ -1.56
PTPRD-213ENST00000537002 SEC14L4Q9UDX3 406 aa5.33□□□□□ -1.56
PTPRD-213ENST00000537002 C2orf81A6NN90 581 aa5.33□□□□□ -1.56
PTPRD-213ENST00000537002 S100A6P06703 90 aa5.33□□□□□ -1.56
PTPRD-213ENST00000537002 IL7P13232 177 aa5.33□□□□□ -1.56
PTPRD-213ENST00000537002 MAPKAPK2P49137 400 aa5.33□□□□□ -1.56
PTPRD-213ENST00000537002 STARP49675 285 aa5.33□□□□□ -1.56
PTPRD-213ENST00000537002 SLC26A2P50443 739 aa5.33□□□□□ -1.56
PTPRD-213ENST00000537002 ELP6Q0PNE2 266 aa5.33□□□□□ -1.56
PTPRD-213ENST00000537002 FBXO48Q5FWF7 155 aa5.33□□□□□ -1.56
PTPRD-213ENST00000537002 SYT6Q5T7P8 510 aaPredicted RBP5.33□□□□□ -1.56
PTPRD-213ENST00000537002 TIGD7Q6NT04 549 aaPredicted RBP5.33□□□□□ -1.56
PTPRD-213ENST00000537002 FAM180AQ6UWF9 173 aa5.33□□□□□ -1.56
PTPRD-213ENST00000537002 PTCHD4Q6ZW05 846 aa5.33□□□□□ -1.56
PTPRD-213ENST00000537002 SNX29P2Q8IUI4 249 aa5.33□□□□□ -1.56
PTPRD-213ENST00000537002 SYT12Q8IV01 421 aa5.33□□□□□ -1.56
PTPRD-213ENST00000537002 BRSK2Q8IWQ3 736 aa5.33□□□□□ -1.56
PTPRD-213ENST00000537002 TTC29Q8NA56 475 aaPredicted RBP5.33□□□□□ -1.56
PTPRD-213ENST00000537002 TMEM161BQ8NDZ6 487 aa5.33□□□□□ -1.56
PTPRD-213ENST00000537002 CLHC1Q8NHS4 586 aa5.33□□□□□ -1.56
PTPRD-213ENST00000537002 DNAJA4Q8WW22 397 aaPredicted RBP5.33□□□□□ -1.56
PTPRD-213ENST00000537002 TMBIM1Q969X1 311 aa5.33□□□□□ -1.56
PTPRD-213ENST00000537002 FUNDC2Q9BWH2 189 aa5.33□□□□□ -1.56
PTPRD-213ENST00000537002 MRPL9Q9BYD2 267 aaKnown RBP5.33□□□□□ -1.56
PTPRD-213ENST00000537002 GSDMCQ9BYG8 508 aa5.33□□□□□ -1.56
PTPRD-213ENST00000537002 KLQ9UEF7 1012 aa5.33□□□□□ -1.56
PTPRD-213ENST00000537002 WASH4PA8MWX3 477 aa5.33□□□□□ -1.56
PTPRD-213ENST00000537002 CHURC1-FNTBB4DL54 471 aa5.33□□□□□ -1.56
PTPRD-213ENST00000537002 NPM3O75607 178 aaKnown RBP5.33□□□□□ -1.56
PTPRD-213ENST00000537002 OR7A10O76100 309 aa5.33□□□□□ -1.56
PTPRD-213ENST00000537002 KDM4BO94953 1096 aa5.33□□□□□ -1.56
PTPRD-213ENST00000537002 CHRM5P08912 532 aaPredicted RBP5.33□□□□□ -1.56
PTPRD-213ENST00000537002 CTSKP43235 329 aa5.33□□□□□ -1.56
PTPRD-213ENST00000537002 CLCN3P51790 818 aa5.33□□□□□ -1.56
PTPRD-213ENST00000537002 HMGCS2P54868 508 aa5.33□□□□□ -1.56
PTPRD-213ENST00000537002 NOGQ13253 232 aa5.33□□□□□ -1.56
PTPRD-213ENST00000537002 ALFQ53S48 1182 aa5.33□□□□□ -1.56
PTPRD-213ENST00000537002 FSTL4Q6MZW2 842 aa5.33□□□□□ -1.56
PTPRD-213ENST00000537002 ASB12Q8WXK4 309 aa5.33□□□□□ -1.56
PTPRD-213ENST00000537002 FIZ1Q96SL8 496 aa5.33□□□□□ -1.56
PTPRD-213ENST00000537002 PDGFCQ9NRA1 345 aa5.33□□□□□ -1.56
PTPRD-213ENST00000537002 CD300AQ9UGN4 299 aa5.33□□□□□ -1.56
PTPRD-213ENST00000537002 PGAP2Q9UHJ9 254 aa5.33□□□□□ -1.56
PTPRD-213ENST00000537002 FBXO5Q9UKT4 447 aa5.33□□□□□ -1.56
PTPRD-213ENST00000537002 VPS9D1Q9Y2B5 631 aa5.33□□□□□ -1.56
PTPRD-213ENST00000537002 KCNE2Q9Y6J6 123 aa5.33□□□□□ -1.56
PTPRD-213ENST00000537002 COL24A1Q17RW2 1714 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 85.8 ms