RNA–Protein interactions for RNA: ENST00000536483.1

PRKDC-207, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 834 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-207ENST00000536483 STK17BO94768 372 aa12.19□□□□□ -0.46
PRKDC-207ENST00000536483 OAS2P29728 719 aaKnown RBP12.19□□□□□ -0.46
PRKDC-207ENST00000536483 CASRP41180 1078 aa12.19□□□□□ -0.46
PRKDC-207ENST00000536483 ABHD18Q0P651 414 aa12.19□□□□□ -0.46
PRKDC-207ENST00000536483 CDC20Q12834 499 aa12.19□□□□□ -0.46
PRKDC-207ENST00000536483 GTF2H3Q13889 308 aa12.19□□□□□ -0.46
PRKDC-207ENST00000536483 SPARCL1Q14515 664 aa12.19□□□□□ -0.46
PRKDC-207ENST00000536483 INSCQ1MX18 579 aa12.19□□□□□ -0.46
PRKDC-207ENST00000536483 DEFB109BQ30KR1 87 aa12.19□□□□□ -0.46
PRKDC-207ENST00000536483 C16orf46Q6P387 395 aa12.19□□□□□ -0.46
PRKDC-207ENST00000536483 CRTC3Q6UUV7 619 aa12.19□□□□□ -0.46
PRKDC-207ENST00000536483 TMEM26Q6ZUK4 368 aa12.19□□□□□ -0.46
PRKDC-207ENST00000536483 NXPE1Q8N323 547 aa12.19□□□□□ -0.46
PRKDC-207ENST00000536483 OR13C4Q8NGS5 318 aa12.19□□□□□ -0.46
PRKDC-207ENST00000536483 C9orf43Q8TAL5 461 aaPredicted RBP12.19□□□□□ -0.46
PRKDC-207ENST00000536483 ZFPM2Q8WW38 1151 aa12.19□□□□□ -0.46
PRKDC-207ENST00000536483 RNF31Q96EP0 1072 aa12.19□□□□□ -0.46
PRKDC-207ENST00000536483 ABHD17AQ96GS6 310 aa12.19□□□□□ -0.46
PRKDC-207ENST00000536483 CDKN2AIPNLQ96HQ2 116 aa12.19□□□□□ -0.46
PRKDC-207ENST00000536483 RANBP9Q96S59 729 aa12.19□□□□□ -0.46
PRKDC-207ENST00000536483 ZPBPQ9BS86 351 aa12.19□□□□□ -0.46
PRKDC-207ENST00000536483 EFHD1Q9BUP0 239 aa12.19□□□□□ -0.46
PRKDC-207ENST00000536483 TBC1D10AQ9BXI6 508 aa12.19□□□□□ -0.46
PRKDC-207ENST00000536483 RAB33BQ9H082 229 aa12.19□□□□□ -0.46
PRKDC-207ENST00000536483 ETNK1Q9HBU6 452 aa12.19□□□□□ -0.46
PRKDC-207ENST00000536483 SLC40A1Q9NP59 571 aa12.19□□□□□ -0.46
PRKDC-207ENST00000536483 PAK5Q9P286 719 aa12.19□□□□□ -0.46
PRKDC-207ENST00000536483 ANKMY1Q9P2S6 941 aa12.19□□□□□ -0.46
PRKDC-207ENST00000536483 FKBPLQ9UIM3 349 aa12.19□□□□□ -0.46
PRKDC-207ENST00000536483 ANAPC2Q9UJX6 822 aa12.19□□□□□ -0.46
PRKDC-207ENST00000536483 TTC7AQ9ULT0 858 aaPredicted RBP12.19□□□□□ -0.46
PRKDC-207ENST00000536483 TMEM184BQ9Y519 407 aaPredicted RBP12.19□□□□□ -0.46
PRKDC-207ENST00000536483 MN1Q10571 1320 aaPredicted RBP12.18□□□□□ -0.46
PRKDC-207ENST00000536483 MGAT4DA6NG13 374 aa12.18□□□□□ -0.46
PRKDC-207ENST00000536483 TOX3O15405 576 aaPredicted RBP12.18□□□□□ -0.46
PRKDC-207ENST00000536483 GPR39O43194 453 aa12.18□□□□□ -0.46
PRKDC-207ENST00000536483 C9P02748 559 aa12.18□□□□□ -0.46
PRKDC-207ENST00000536483 GSTM1P09488 218 aa12.18□□□□□ -0.46
PRKDC-207ENST00000536483 ANKRD34CP0C6C1 535 aa12.18□□□□□ -0.46
PRKDC-207ENST00000536483 ITGALP20701 1170 aa12.18□□□□□ -0.46
PRKDC-207ENST00000536483 TERF1P54274 439 aa12.18□□□□□ -0.46
PRKDC-207ENST00000536483 FOXK1P85037 733 aa12.18□□□□□ -0.46
PRKDC-207ENST00000536483 GSTM4Q03013 218 aa12.18□□□□□ -0.46
PRKDC-207ENST00000536483 ACVR1Q04771 509 aa12.18□□□□□ -0.46
PRKDC-207ENST00000536483 CDH17Q12864 832 aa12.18□□□□□ -0.46
PRKDC-207ENST00000536483 LAMB3Q13751 1172 aa12.18□□□□□ -0.46
PRKDC-207ENST00000536483 UBAP2LQ14157 1087 aaKnown RBP12.18□□□□□ -0.46
PRKDC-207ENST00000536483 ZNF658BQ4V348 819 aaPredicted RBP12.18□□□□□ -0.46
PRKDC-207ENST00000536483 ATP1A1-AS1Q5TC04 95 aa12.18□□□□□ -0.46
PRKDC-207ENST00000536483 TMEM220Q6QAJ8 160 aa12.18□□□□□ -0.46
PRKDC-207ENST00000536483 TRAPPC5Q8IUR0 188 aa12.18□□□□□ -0.46
PRKDC-207ENST00000536483 RASGEF1CQ8N431 466 aa12.18□□□□□ -0.46
PRKDC-207ENST00000536483 BEND7Q8N7W2 519 aaPredicted RBP12.18□□□□□ -0.46
PRKDC-207ENST00000536483 OR2L2Q8NH16 312 aa12.18□□□□□ -0.46
PRKDC-207ENST00000536483 GDAP1Q8TB36 358 aa12.18□□□□□ -0.46
PRKDC-207ENST00000536483 APOBEC4Q8WW27 367 aaKnown RBP12.18□□□□□ -0.46
PRKDC-207ENST00000536483 C1orf54Q8WWF1 131 aa12.18□□□□□ -0.46
PRKDC-207ENST00000536483 STARD8Q92502 1023 aa12.18□□□□□ -0.46
PRKDC-207ENST00000536483 CASS4Q9NQ75 786 aa12.18□□□□□ -0.46
PRKDC-207ENST00000536483 EIF2B3Q9NR50 452 aaKnown RBP12.18□□□□□ -0.46
PRKDC-207ENST00000536483 SEMA5BQ9P283 1151 aa12.18□□□□□ -0.46
PRKDC-207ENST00000536483 EPHA6Q9UF33 1036 aa12.18□□□□□ -0.46
PRKDC-207ENST00000536483 ACSL5Q9ULC5 683 aa12.18□□□□□ -0.46
PRKDC-207ENST00000536483 ZNF148Q9UQR1 794 aa12.18□□□□□ -0.46
PRKDC-207ENST00000536483 JRKLQ9Y4A0 524 aa12.18□□□□□ -0.46
PRKDC-207ENST00000536483 MRPS18BQ9Y676 258 aaKnown RBP12.18□□□□□ -0.46
PRKDC-207ENST00000536483 LRRK2Q5S007 2527 aa12.17□□□□□ -0.46
PRKDC-207ENST00000536483 ZNF106Q9H2Y7 1883 aaKnown RBP12.17□□□□□ -0.46
PRKDC-207ENST00000536483 DLGAP3O95886 979 aa12.17□□□□□ -0.46
PRKDC-207ENST00000536483 VIPP01282 170 aa12.17□□□□□ -0.46
PRKDC-207ENST00000536483 FGGP02679 453 aa12.17□□□□□ -0.46
PRKDC-207ENST00000536483 RALBP11234 206 aa12.17□□□□□ -0.46
PRKDC-207ENST00000536483 TCN2P20062 427 aa12.17□□□□□ -0.46
PRKDC-207ENST00000536483 MSH3P20585 1137 aa12.17□□□□□ -0.46
PRKDC-207ENST00000536483 PRLHRP49683 370 aa12.17□□□□□ -0.46
PRKDC-207ENST00000536483 GFERP55789 205 aa12.17□□□□□ -0.46
PRKDC-207ENST00000536483 ARMC3Q5W041 872 aa12.17□□□□□ -0.46
PRKDC-207ENST00000536483 GLIS1Q8NBF1 620 aa12.17□□□□□ -0.46
PRKDC-207ENST00000536483 DNAJC1Q96KC8 554 aaKnown RBP12.17□□□□□ -0.46
PRKDC-207ENST00000536483 COPS8Q99627 209 aa12.17□□□□□ -0.46
PRKDC-207ENST00000536483 TRIT1Q9H3H1 467 aaKnown RBP12.17□□□□□ -0.46
PRKDC-207ENST00000536483 ZDHHC3Q9NYG2 299 aa12.17□□□□□ -0.46
PRKDC-207ENST00000536483 OGFRQ9NZT2 677 aa12.17□□□□□ -0.46
PRKDC-207ENST00000536483 WDR37Q9Y2I8 494 aa12.17□□□□□ -0.46
PRKDC-207ENST00000536483 OR2AG2A6NM03 316 aa12.16□□□□□ -0.46
PRKDC-207ENST00000536483 PDZK1P1A8MUH7 402 aa12.16□□□□□ -0.46
PRKDC-207ENST00000536483 CFAP99D6REC4 459 aa12.16□□□□□ -0.46
PRKDC-207ENST00000536483 AP3B1O00203 1094 aa12.16□□□□□ -0.46
PRKDC-207ENST00000536483 AP2A2O94973 939 aa12.16□□□□□ -0.46
PRKDC-207ENST00000536483 IFNB1P01574 187 aa12.16□□□□□ -0.46
PRKDC-207ENST00000536483 ATP1B2P14415 290 aaPredicted RBP12.16□□□□□ -0.46
PRKDC-207ENST00000536483 ZNF28P17035 718 aa12.16□□□□□ -0.46
PRKDC-207ENST00000536483 TPH1P17752 444 aa12.16□□□□□ -0.46
PRKDC-207ENST00000536483 F8A1P23610 371 aa12.16□□□□□ -0.46
PRKDC-207ENST00000536483 ADRA1DP25100 572 aa12.16□□□□□ -0.46
PRKDC-207ENST00000536483 ACRV1P26436 265 aa12.16□□□□□ -0.46
PRKDC-207ENST00000536483 MC4RP32245 332 aa12.16□□□□□ -0.46
PRKDC-207ENST00000536483 RPL22P35268 128 aaKnown RBP12.16□□□□□ -0.46
PRKDC-207ENST00000536483 STAT5AP42229 794 aa12.16□□□□□ -0.46
PRKDC-207ENST00000536483 HALP42357 657 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms