RNA–Protein interactions for RNA: ENST00000533820.5

CAPN1-226, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-226ENST00000533820 MEP1AQ16819 746 aa19.05■□□□□ 0.64
CAPN1-226ENST00000533820 ANKRD26P1Q6NSI1 321 aa19.05■□□□□ 0.64
CAPN1-226ENST00000533820 GALNT18Q6P9A2 607 aa19.05■□□□□ 0.64
CAPN1-226ENST00000533820 DHRS4L2Q6PKH6 230 aa19.05■□□□□ 0.64
CAPN1-226ENST00000533820 HID1Q8IV36 788 aa19.05■□□□□ 0.64
CAPN1-226ENST00000533820 HPS1Q92902 700 aa19.05■□□□□ 0.64
CAPN1-226ENST00000533820 CINPQ9BW66 212 aaPredicted RBP19.05■□□□□ 0.64
CAPN1-226ENST00000533820 CCDC90BQ9GZT6 254 aa19.05■□□□□ 0.64
CAPN1-226ENST00000533820 FBXO44Q9H4M3 255 aa19.05■□□□□ 0.64
CAPN1-226ENST00000533820 LIMD1Q9UGP4 676 aa19.05■□□□□ 0.64
CAPN1-226ENST00000533820 TDRD15B5MCY1 1934 aaKnown RBP19.05■□□□□ 0.64
CAPN1-226ENST00000533820 GNGT2O14610 69 aa19.05■□□□□ 0.64
CAPN1-226ENST00000533820 GSTA4O15217 222 aa19.05■□□□□ 0.64
CAPN1-226ENST00000533820 PKMP14618 531 aaKnown RBP19.05■□□□□ 0.64
CAPN1-226ENST00000533820 DCKP27707 260 aa19.05■□□□□ 0.64
CAPN1-226ENST00000533820 GDF5P43026 501 aa19.05■□□□□ 0.64
CAPN1-226ENST00000533820 IL2P60568 153 aa19.05■□□□□ 0.64
CAPN1-226ENST00000533820 FOXM1Q08050 763 aa19.05■□□□□ 0.64
CAPN1-226ENST00000533820 TAF1CQ15572 869 aaPredicted RBP19.05■□□□□ 0.64
CAPN1-226ENST00000533820 UTS2BQ765I0 119 aa19.05■□□□□ 0.64
CAPN1-226ENST00000533820 R3HCC1LQ7Z5L2 792 aaKnown RBP19.05■□□□□ 0.64
CAPN1-226ENST00000533820 SERINC5Q86VE9 423 aa19.05■□□□□ 0.64
CAPN1-226ENST00000533820 PTRH1Q86Y79 214 aaKnown RBP19.05■□□□□ 0.64
CAPN1-226ENST00000533820 OR10A6Q8NH74 314 aa19.05■□□□□ 0.64
CAPN1-226ENST00000533820 SNX19Q92543 992 aa19.05■□□□□ 0.64
CAPN1-226ENST00000533820 ITCHQ96J02 903 aa19.05■□□□□ 0.64
CAPN1-226ENST00000533820 GLT1D1Q96MS3 346 aa19.05■□□□□ 0.64
CAPN1-226ENST00000533820 LHPPQ9H008 270 aa19.05■□□□□ 0.64
CAPN1-226ENST00000533820 TOR3AQ9H497 397 aa19.05■□□□□ 0.64
CAPN1-226ENST00000533820 VPS4BO75351 444 aa19.04■□□□□ 0.64
CAPN1-226ENST00000533820 ZNF140P52738 457 aaPredicted RBP19.04■□□□□ 0.64
CAPN1-226ENST00000533820 EEFSECP57772 596 aaKnown RBP19.04■□□□□ 0.64
CAPN1-226ENST00000533820 NFATC3Q12968 1075 aa19.04■□□□□ 0.64
CAPN1-226ENST00000533820 AP5B1Q2VPB7 878 aa19.04■□□□□ 0.64
CAPN1-226ENST00000533820 PARP15Q460N3 678 aa19.04■□□□□ 0.64
CAPN1-226ENST00000533820 CTXN3Q4LDR2 81 aa19.04■□□□□ 0.64
CAPN1-226ENST00000533820 XKR7Q5GH72 579 aa19.04■□□□□ 0.64
CAPN1-226ENST00000533820 ACDQ96AP0 544 aa19.04■□□□□ 0.64
CAPN1-226ENST00000533820 TADA1Q96BN2 335 aa19.04■□□□□ 0.64
CAPN1-226ENST00000533820 CRISPLD1Q9H336 500 aa19.04■□□□□ 0.64
CAPN1-226ENST00000533820 PARVBQ9HBI1 364 aa19.04■□□□□ 0.64
CAPN1-226ENST00000533820 TRMT13Q9NUP7 481 aaKnown RBP19.04■□□□□ 0.64
CAPN1-226ENST00000533820 RIC8BQ9NVN3 520 aa19.04■□□□□ 0.64
CAPN1-226ENST00000533820 MTPAPQ9NVV4 582 aaKnown RBP eCLIP19.04■□□□□ 0.64
CAPN1-226ENST00000533820 GIN1Q9NXP7 522 aa19.04■□□□□ 0.64
CAPN1-226ENST00000533820 NIPSNAP3AQ9UFN0 247 aaPredicted RBP19.04■□□□□ 0.64
CAPN1-226ENST00000533820 FAM234BA2RU67 622 aa19.04■□□□□ 0.64
CAPN1-226ENST00000533820 TNFRSF10AO00220 468 aa19.04■□□□□ 0.64
CAPN1-226ENST00000533820 E2F3O00716 465 aa19.04■□□□□ 0.64
CAPN1-226ENST00000533820 XYLBO75191 536 aa19.04■□□□□ 0.64
CAPN1-226ENST00000533820 PRR35P0CG20 571 aa19.04■□□□□ 0.64
CAPN1-226ENST00000533820 BMP1P13497 986 aa19.04■□□□□ 0.64
CAPN1-226ENST00000533820 SLC2A4P14672 509 aa19.04■□□□□ 0.64
CAPN1-226ENST00000533820 CCNA2P20248 432 aa19.04■□□□□ 0.64
CAPN1-226ENST00000533820 TACR2P21452 398 aa19.04■□□□□ 0.64
CAPN1-226ENST00000533820 EMX2Q04743 252 aa19.04■□□□□ 0.64
CAPN1-226ENST00000533820 CHRNB3Q05901 458 aa19.04■□□□□ 0.64
CAPN1-226ENST00000533820 PHKG1Q16816 387 aa19.04■□□□□ 0.64
CAPN1-226ENST00000533820 TYSND1Q2T9J0 566 aa19.04■□□□□ 0.64
CAPN1-226ENST00000533820 CYP20A1Q6UW02 462 aa19.04■□□□□ 0.64
CAPN1-226ENST00000533820 SPESP1Q6UW49 350 aa19.04■□□□□ 0.64
CAPN1-226ENST00000533820 FRA10AC1Q70Z53 315 aa19.04■□□□□ 0.64
CAPN1-226ENST00000533820 SLC15A4Q8N697 577 aa19.04■□□□□ 0.64
CAPN1-226ENST00000533820 ADAMTS16Q8TE57 1224 aa19.04■□□□□ 0.64
CAPN1-226ENST00000533820 ITPKCQ96DU7 683 aa19.04■□□□□ 0.64
CAPN1-226ENST00000533820 KLHL25Q9H0H3 589 aa19.04■□□□□ 0.64
CAPN1-226ENST00000533820 NLE1Q9NVX2 485 aaPredicted RBP19.04■□□□□ 0.64
CAPN1-226ENST00000533820 VAPAQ9P0L0 249 aa19.04■□□□□ 0.64
CAPN1-226ENST00000533820 AASSQ9UDR5 926 aa19.04■□□□□ 0.64
CAPN1-226ENST00000533820 IGLV3-10A0A075B6K4 115 aa19.04■□□□□ 0.64
CAPN1-226ENST00000533820 ZNF623O75123 536 aa19.04■□□□□ 0.64
CAPN1-226ENST00000533820 MLYCDO95822 493 aa19.04■□□□□ 0.64
CAPN1-226ENST00000533820 TSPAN12O95859 305 aa19.04■□□□□ 0.64
CAPN1-226ENST00000533820 THRBP10828 461 aa19.04■□□□□ 0.64
CAPN1-226ENST00000533820 SLC6A4P31645 630 aa19.04■□□□□ 0.64
CAPN1-226ENST00000533820 HLCSP50747 726 aa19.04■□□□□ 0.64
CAPN1-226ENST00000533820 RPL38P63173 70 aaKnown RBP19.04■□□□□ 0.64
CAPN1-226ENST00000533820 IL1RL1Q01638 556 aa19.04■□□□□ 0.64
CAPN1-226ENST00000533820 TRIP4Q15650 581 aaPredicted RBP19.04■□□□□ 0.64
CAPN1-226ENST00000533820 NKG7Q16617 165 aa19.04■□□□□ 0.64
CAPN1-226ENST00000533820 DLEU7Q6UYE1 221 aa19.04■□□□□ 0.64
CAPN1-226ENST00000533820 C16orf59Q7L2K0 433 aa19.04■□□□□ 0.64
CAPN1-226ENST00000533820 MILR1Q7Z6M3 343 aa19.04■□□□□ 0.64
CAPN1-226ENST00000533820 APOL5Q9BWW9 433 aa19.04■□□□□ 0.64
CAPN1-226ENST00000533820 DEAF1O75398 565 aaPredicted RBP19.03■□□□□ 0.64
CAPN1-226ENST00000533820 CELF2O95319 508 aaKnown RBP19.03■□□□□ 0.64
CAPN1-226ENST00000533820 AKR1A1P14550 325 aa19.03■□□□□ 0.64
CAPN1-226ENST00000533820 AGXTP21549 392 aa19.03■□□□□ 0.64
CAPN1-226ENST00000533820 PTPRDP23468 1912 aa19.03■□□□□ 0.64
CAPN1-226ENST00000533820 MLLT10P55197 1068 aa19.03■□□□□ 0.64
CAPN1-226ENST00000533820 HMGCS1Q01581 520 aa19.03■□□□□ 0.64
CAPN1-226ENST00000533820 ABRAXAS2Q15018 415 aa19.03■□□□□ 0.64
CAPN1-226ENST00000533820 CTSL3PQ5NE16 218 aa19.03■□□□□ 0.64
CAPN1-226ENST00000533820 VARS2Q5ST30 1063 aaKnown RBP19.03■□□□□ 0.64
CAPN1-226ENST00000533820 IRAK1BP1Q5VVH5 260 aa19.03■□□□□ 0.64
CAPN1-226ENST00000533820 FAM117BQ6P1L5 589 aa19.03■□□□□ 0.64
CAPN1-226ENST00000533820 PAF1Q8N7H5 531 aa19.03■□□□□ 0.64
CAPN1-226ENST00000533820 ACTL8Q9H568 366 aa19.03■□□□□ 0.64
CAPN1-226ENST00000533820 IKZF5Q9H5V7 419 aa19.03■□□□□ 0.64
CAPN1-226ENST00000533820 FARSBQ9NSD9 589 aaKnown RBP19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms