RNA–Protein interactions for RNA: ENST00000533149.1

TRAPPC4-213, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,340 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-213ENST00000533149 MYCLP1P12525 358 aaPredicted RBP11.14□□□□□ -0.63
TRAPPC4-213ENST00000533149 HSPA9P38646 679 aaKnown RBP11.14□□□□□ -0.63
TRAPPC4-213ENST00000533149 GEMP55040 296 aa11.14□□□□□ -0.63
TRAPPC4-213ENST00000533149 ARL4CP56559 192 aa11.14□□□□□ -0.63
TRAPPC4-213ENST00000533149 MAXP61244 160 aa11.14□□□□□ -0.63
TRAPPC4-213ENST00000533149 RHOAP61586 193 aa11.14□□□□□ -0.63
TRAPPC4-213ENST00000533149 SARNPP82979 210 aaKnown RBP11.14□□□□□ -0.63
TRAPPC4-213ENST00000533149 CDK16Q00536 496 aa11.14□□□□□ -0.63
TRAPPC4-213ENST00000533149 SPARCL1Q14515 664 aa11.14□□□□□ -0.63
TRAPPC4-213ENST00000533149 ZNF235Q14590 738 aa11.14□□□□□ -0.63
TRAPPC4-213ENST00000533149 INO80DQ53TQ3 878 aaPredicted RBP11.14□□□□□ -0.63
TRAPPC4-213ENST00000533149 FNBP1LQ5T0N5 605 aa11.14□□□□□ -0.63
TRAPPC4-213ENST00000533149 CFAP58Q5T655 872 aa11.14□□□□□ -0.63
TRAPPC4-213ENST00000533149 JMJD6Q6NYC1 403 aaPredicted RBP11.14□□□□□ -0.63
TRAPPC4-213ENST00000533149 BRAT1Q6PJG6 821 aa11.14□□□□□ -0.63
TRAPPC4-213ENST00000533149 SLC30A9Q6PML9 568 aa11.14□□□□□ -0.63
TRAPPC4-213ENST00000533149 PPP1R21Q6ZMI0 780 aa11.14□□□□□ -0.63
TRAPPC4-213ENST00000533149 HPS6Q86YV9 775 aa11.14□□□□□ -0.63
TRAPPC4-213ENST00000533149 KLHDC8BQ8IXV7 354 aa11.14□□□□□ -0.63
TRAPPC4-213ENST00000533149 BBS5Q8N3I7 341 aa11.14□□□□□ -0.63
TRAPPC4-213ENST00000533149 SPATA22Q8NHS9 363 aa11.14□□□□□ -0.63
TRAPPC4-213ENST00000533149 PATE1Q8WXA2 126 aa11.14□□□□□ -0.63
TRAPPC4-213ENST00000533149 THAP4Q8WY91 577 aa11.14□□□□□ -0.63
TRAPPC4-213ENST00000533149 STAMBPL1Q96FJ0 436 aa11.14□□□□□ -0.63
TRAPPC4-213ENST00000533149 OXNAD1Q96HP4 312 aaPredicted RBP11.14□□□□□ -0.63
TRAPPC4-213ENST00000533149 MLPHQ9BV36 600 aaPredicted RBP11.14□□□□□ -0.63
TRAPPC4-213ENST00000533149 LGR4Q9BXB1 951 aa11.14□□□□□ -0.63
TRAPPC4-213ENST00000533149 TRIM55Q9BYV6 548 aa11.14□□□□□ -0.63
TRAPPC4-213ENST00000533149 TXLNGYQ9BZA5 131 aa11.14□□□□□ -0.63
TRAPPC4-213ENST00000533149 TSPYL1Q9H0U9 437 aa11.14□□□□□ -0.63
TRAPPC4-213ENST00000533149 MLXIPLQ9NP71 852 aa11.14□□□□□ -0.63
TRAPPC4-213ENST00000533149 EIF2B3Q9NR50 452 aaKnown RBP11.14□□□□□ -0.63
TRAPPC4-213ENST00000533149 UBP1Q9NZI7 540 aa11.14□□□□□ -0.63
TRAPPC4-213ENST00000533149 ZNF451Q9Y4E5 1061 aa11.14□□□□□ -0.63
TRAPPC4-213ENST00000533149 PCDHGB7Q9Y5F8 929 aa11.14□□□□□ -0.63
TRAPPC4-213ENST00000533149 PCDHGA6Q9Y5G7 932 aa11.14□□□□□ -0.63
TRAPPC4-213ENST00000533149 CRYBG3Q68DQ2 2970 aa11.14□□□□□ -0.63
TRAPPC4-213ENST00000533149 SPENQ96T58 3664 aaKnown RBP11.14□□□□□ -0.63
TRAPPC4-213ENST00000533149 ARHGEF17Q96PE2 2063 aaPredicted RBP11.13□□□□□ -0.63
TRAPPC4-213ENST00000533149 ANXA9O76027 345 aa11.13□□□□□ -0.63
TRAPPC4-213ENST00000533149 TMCC1O94876 653 aa11.13□□□□□ -0.63
TRAPPC4-213ENST00000533149 CBX6O95503 412 aa11.13□□□□□ -0.63
TRAPPC4-213ENST00000533149 AP2A1O95782 977 aa11.13□□□□□ -0.63
TRAPPC4-213ENST00000533149 CCNYL3P0C7X3 344 aa11.13□□□□□ -0.63
TRAPPC4-213ENST00000533149 MMP12P39900 470 aa11.13□□□□□ -0.63
TRAPPC4-213ENST00000533149 GRIA1P42261 906 aa11.13□□□□□ -0.63
TRAPPC4-213ENST00000533149 MAGEA4P43358 317 aa11.13□□□□□ -0.63
TRAPPC4-213ENST00000533149 FASLGP48023 281 aa11.13□□□□□ -0.63
TRAPPC4-213ENST00000533149 DSC2Q02487 901 aa11.13□□□□□ -0.63
TRAPPC4-213ENST00000533149 SLMAPQ14BN4 828 aa11.13□□□□□ -0.63
TRAPPC4-213ENST00000533149 NR6A1Q15406 480 aa11.13□□□□□ -0.63
TRAPPC4-213ENST00000533149 ZXDCQ2QGD7 858 aaPredicted RBP11.13□□□□□ -0.63
TRAPPC4-213ENST00000533149 BBS9Q3SYG4 887 aa11.13□□□□□ -0.63
TRAPPC4-213ENST00000533149 MSS51Q4VC12 460 aa11.13□□□□□ -0.63
TRAPPC4-213ENST00000533149 PRR30Q53SZ7 412 aaPredicted RBP11.13□□□□□ -0.63
TRAPPC4-213ENST00000533149 KCTD11Q693B1 232 aa11.13□□□□□ -0.63
TRAPPC4-213ENST00000533149 PNCKQ6P2M8 343 aa11.13□□□□□ -0.63
TRAPPC4-213ENST00000533149 CEP128Q6ZU80 1094 aa11.13□□□□□ -0.63
TRAPPC4-213ENST00000533149 CENPUQ71F23 418 aa11.13□□□□□ -0.63
TRAPPC4-213ENST00000533149 TMC3Q7Z5M5 1100 aa11.13□□□□□ -0.63
TRAPPC4-213ENST00000533149 CAND1Q86VP6 1230 aaKnown RBP11.13□□□□□ -0.63
TRAPPC4-213ENST00000533149 MREGQ8N565 214 aa11.13□□□□□ -0.63
TRAPPC4-213ENST00000533149 TSEN2Q8NCE0 465 aaKnown RBP11.13□□□□□ -0.63
TRAPPC4-213ENST00000533149 ARRDC2Q8TBH0 407 aa11.13□□□□□ -0.63
TRAPPC4-213ENST00000533149 IMP4Q96G21 291 aaKnown RBP11.13□□□□□ -0.63
TRAPPC4-213ENST00000533149 ZNF641Q96N77 438 aaPredicted RBP11.13□□□□□ -0.63
TRAPPC4-213ENST00000533149 PSKH2Q96QS6 385 aa11.13□□□□□ -0.63
TRAPPC4-213ENST00000533149 CINPQ9BW66 212 aaPredicted RBP11.13□□□□□ -0.63
TRAPPC4-213ENST00000533149 FRMD8Q9BZ67 464 aaPredicted RBP11.13□□□□□ -0.63
TRAPPC4-213ENST00000533149 SUV39H2Q9H5I1 410 aa11.13□□□□□ -0.63
TRAPPC4-213ENST00000533149 SUDS3Q9H7L9 328 aaPredicted RBP11.13□□□□□ -0.63
TRAPPC4-213ENST00000533149 SAYSD1Q9NPB0 183 aa11.13□□□□□ -0.63
TRAPPC4-213ENST00000533149 ACSS2Q9NR19 701 aa11.13□□□□□ -0.63
TRAPPC4-213ENST00000533149 ZNF446Q9NWS9 450 aa11.13□□□□□ -0.63
TRAPPC4-213ENST00000533149 AAR2Q9Y312 384 aaKnown RBP11.13□□□□□ -0.63
TRAPPC4-213ENST00000533149 F8P00451 2351 aa11.13□□□□□ -0.63
TRAPPC4-213ENST00000533149 HIVEP3Q5T1R4 2406 aa11.13□□□□□ -0.63
TRAPPC4-213ENST00000533149 HEATR9A2RTY3 570 aa11.12□□□□□ -0.63
TRAPPC4-213ENST00000533149 GOLGA6CA6NDK9 693 aa11.12□□□□□ -0.63
TRAPPC4-213ENST00000533149 GOLGA6BA6NDN3 693 aa11.12□□□□□ -0.63
TRAPPC4-213ENST00000533149 ERI2A8K979 691 aaKnown RBP11.12□□□□□ -0.63
TRAPPC4-213ENST00000533149 EIF3HO15372 352 aaKnown RBP eCLIP11.12□□□□□ -0.63
TRAPPC4-213ENST00000533149 AVILO75366 819 aa11.12□□□□□ -0.63
TRAPPC4-213ENST00000533149 PMPCBO75439 489 aa11.12□□□□□ -0.63
TRAPPC4-213ENST00000533149 SUN1O94901 812 aa11.12□□□□□ -0.63
TRAPPC4-213ENST00000533149 MT-CYBP00156 380 aaPredicted RBP11.12□□□□□ -0.63
TRAPPC4-213ENST00000533149 MMP2P08253 660 aa11.12□□□□□ -0.63
TRAPPC4-213ENST00000533149 GOLGA6DP0CG33 693 aa11.12□□□□□ -0.63
TRAPPC4-213ENST00000533149 CES1P23141 567 aa11.12□□□□□ -0.63
TRAPPC4-213ENST00000533149 NFKBIAP25963 317 aa11.12□□□□□ -0.63
TRAPPC4-213ENST00000533149 AK4P27144 223 aaPredicted RBP11.12□□□□□ -0.63
TRAPPC4-213ENST00000533149 CD86P42081 329 aa11.12□□□□□ -0.63
TRAPPC4-213ENST00000533149 GNPDA1P46926 289 aa11.12□□□□□ -0.63
TRAPPC4-213ENST00000533149 RGRP47804 291 aa11.12□□□□□ -0.63
TRAPPC4-213ENST00000533149 WNT3AP56704 352 aa11.12□□□□□ -0.63
TRAPPC4-213ENST00000533149 PDIA2Q13087 525 aaKnown RBP11.12□□□□□ -0.63
TRAPPC4-213ENST00000533149 CBLBQ13191 982 aa11.12□□□□□ -0.63
TRAPPC4-213ENST00000533149 ELOAQ14241 798 aaKnown RBP11.12□□□□□ -0.63
TRAPPC4-213ENST00000533149 IHHQ14623 411 aa11.12□□□□□ -0.63
TRAPPC4-213ENST00000533149 CHRNA6Q15825 494 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms