RNA–Protein interactions for RNA: ENST00000533105.1

NDUFS3-210, Transcript of NADH:ubiquinone oxidoreductase core subunit S3, humanhuman

TSL 4

Gene NDUFS3, Length 567 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3-210ENST00000533105 DBN1Q16643 649 aa21.43■■□□□ 1.02
NDUFS3-210ENST00000533105 CACHD1Q5VU97 1274 aa21.43■■□□□ 1.02
NDUFS3-210ENST00000533105 KLHL35Q6PF15 583 aa21.43■■□□□ 1.02
NDUFS3-210ENST00000533105 XKR5Q6UX68 686 aa21.43■■□□□ 1.02
NDUFS3-210ENST00000533105 CEACAM20Q6UY09 585 aa21.43■■□□□ 1.02
NDUFS3-210ENST00000533105 CLDN19Q8N6F1 224 aa21.43■■□□□ 1.02
NDUFS3-210ENST00000533105 IL22RA1Q8N6P7 574 aa21.43■■□□□ 1.02
NDUFS3-210ENST00000533105 NKD1Q969G9 470 aa21.43■■□□□ 1.02
NDUFS3-210ENST00000533105 RMDN2Q96LZ7 410 aa21.43■■□□□ 1.02
NDUFS3-210ENST00000533105 CCM2Q9BSQ5 444 aa21.43■■□□□ 1.02
NDUFS3-210ENST00000533105 GRPEL1Q9HAV7 217 aa21.43■■□□□ 1.02
NDUFS3-210ENST00000533105 SMARCAL1Q9NZC9 954 aa21.43■■□□□ 1.02
NDUFS3-210ENST00000533105 DRG1Q9Y295 367 aaKnown RBP21.43■■□□□ 1.02
NDUFS3-210ENST00000533105 ZKSCAN5Q9Y2L8 839 aa21.43■■□□□ 1.02
NDUFS3-210ENST00000533105 CCDC162PA2VCL2 907 aa21.42■■□□□ 1.02
NDUFS3-210ENST00000533105 TOX3O15405 576 aaPredicted RBP21.42■■□□□ 1.02
NDUFS3-210ENST00000533105 PRB1P04280 392 aa21.42■■□□□ 1.02
NDUFS3-210ENST00000533105 KCNJ1P48048 391 aa21.42■■□□□ 1.02
NDUFS3-210ENST00000533105 PPP1CAP62136 330 aa21.42■■□□□ 1.02
NDUFS3-210ENST00000533105 LAMB3Q13751 1172 aa21.42■■□□□ 1.02
NDUFS3-210ENST00000533105 DRICH1Q6PGQ1 229 aaPredicted RBP21.42■■□□□ 1.02
NDUFS3-210ENST00000533105 SMG1Q96Q15 3661 aaKnown RBP21.42■■□□□ 1.02
NDUFS3-210ENST00000533105 ZPBPQ9BS86 351 aa21.42■■□□□ 1.02
NDUFS3-210ENST00000533105 ZNF768Q9H5H4 540 aaKnown RBP21.42■■□□□ 1.02
NDUFS3-210ENST00000533105 VPS37BQ9H9H4 285 aa21.42■■□□□ 1.02
NDUFS3-210ENST00000533105 CASS4Q9NQ75 786 aa21.42■■□□□ 1.02
NDUFS3-210ENST00000533105 SLC2A6Q9UGQ3 507 aa21.42■■□□□ 1.02
NDUFS3-210ENST00000533105 MGAQ8IWI9 3026 aa21.41■■□□□ 1.02
NDUFS3-210ENST00000533105 C17orf113A0A1B0GUU1 675 aa21.41■■□□□ 1.02
NDUFS3-210ENST00000533105 RAD1O60671 282 aa21.41■■□□□ 1.02
NDUFS3-210ENST00000533105 ADRA1DP25100 572 aa21.41■■□□□ 1.02
NDUFS3-210ENST00000533105 SH3BP2P78314 561 aa21.41■■□□□ 1.02
NDUFS3-210ENST00000533105 BASP1P80723 227 aaKnown RBP21.41■■□□□ 1.02
NDUFS3-210ENST00000533105 KCTD19Q17RG1 926 aaPredicted RBP21.41■■□□□ 1.02
NDUFS3-210ENST00000533105 TSTD2Q5T7W7 516 aa21.41■■□□□ 1.02
NDUFS3-210ENST00000533105 CAPRIN2Q6IMN6 1127 aaKnown RBP21.41■■□□□ 1.02
NDUFS3-210ENST00000533105 PCSK4Q6UW60 755 aa21.41■■□□□ 1.02
NDUFS3-210ENST00000533105 CACNA2D3Q8IZS8 1091 aa21.41■■□□□ 1.02
NDUFS3-210ENST00000533105 ZSCAN1Q8NBB4 408 aa21.41■■□□□ 1.02
NDUFS3-210ENST00000533105 OR13J1Q8NGT2 312 aa21.41■■□□□ 1.02
NDUFS3-210ENST00000533105 HDAC10Q969S8 669 aa21.41■■□□□ 1.02
NDUFS3-210ENST00000533105 RNF31Q96EP0 1072 aa21.41■■□□□ 1.02
NDUFS3-210ENST00000533105 COG4Q9H9E3 785 aa21.41■■□□□ 1.02
NDUFS3-210ENST00000533105 SIDT1Q9NXL6 827 aaKnown RBP21.41■■□□□ 1.02
NDUFS3-210ENST00000533105 EPHA6Q9UF33 1036 aa21.41■■□□□ 1.02
NDUFS3-210ENST00000533105 COLEC10Q9Y6Z7 277 aa21.41■■□□□ 1.02
NDUFS3-210ENST00000533105 SDK2Q58EX2 2172 aa21.4■■□□□ 1.02
NDUFS3-210ENST00000533105 PSMA3P25788 255 aa21.4■■□□□ 1.02
NDUFS3-210ENST00000533105 FOXN2P32314 431 aa21.4■■□□□ 1.02
NDUFS3-210ENST00000533105 ZNF449Q6P9G9 518 aa21.4■■□□□ 1.02
NDUFS3-210ENST00000533105 PRSS42Q7Z5A4 293 aa21.4■■□□□ 1.02
NDUFS3-210ENST00000533105 LSM14AQ8ND56 463 aaKnown RBP21.4■■□□□ 1.02
NDUFS3-210ENST00000533105 TBRG4Q969Z0 631 aaKnown RBP eCLIP21.4■■□□□ 1.02
NDUFS3-210ENST00000533105 ELMO2Q96JJ3 720 aa21.4■■□□□ 1.02
NDUFS3-210ENST00000533105 ZNF778Q96MU6 729 aa21.4■■□□□ 1.02
NDUFS3-210ENST00000533105 OR6C1Q96RD1 312 aa21.4■■□□□ 1.02
NDUFS3-210ENST00000533105 FERD3LQ96RJ6 166 aa21.4■■□□□ 1.02
NDUFS3-210ENST00000533105 RANBP9Q96S59 729 aa21.4■■□□□ 1.02
NDUFS3-210ENST00000533105 RAB33BQ9H082 229 aa21.4■■□□□ 1.02
NDUFS3-210ENST00000533105 KIR3DX1Q9H7L2 352 aa21.4■■□□□ 1.02
NDUFS3-210ENST00000533105 HRASLS2Q9NWW9 162 aa21.4■■□□□ 1.02
NDUFS3-210ENST00000533105 SLC24A2Q9UI40 661 aa21.4■■□□□ 1.02
NDUFS3-210ENST00000533105 PILRAQ9UKJ1 303 aa21.4■■□□□ 1.02
NDUFS3-210ENST00000533105 PCDHGA4Q9Y5G9 962 aa21.4■■□□□ 1.02
NDUFS3-210ENST00000533105 HEBP2Q9Y5Z4 205 aa21.4■■□□□ 1.02
NDUFS3-210ENST00000533105 PRSS21Q9Y6M0 314 aa21.4■■□□□ 1.02
NDUFS3-210ENST00000533105 TK2O00142 265 aa21.39■■□□□ 1.01
NDUFS3-210ENST00000533105 IFRD1O00458 451 aaPredicted RBP21.39■■□□□ 1.01
NDUFS3-210ENST00000533105 STK17BO94768 372 aa21.39■■□□□ 1.01
NDUFS3-210ENST00000533105 AP2A2O94973 939 aa21.39■■□□□ 1.01
NDUFS3-210ENST00000533105 GOT2P00505 430 aaKnown RBP21.39■■□□□ 1.01
NDUFS3-210ENST00000533105 WT1P19544 449 aaPredicted RBP21.39■■□□□ 1.01
NDUFS3-210ENST00000533105 NSG1P42857 185 aa21.39■■□□□ 1.01
NDUFS3-210ENST00000533105 PREPP48147 710 aa21.39■■□□□ 1.01
NDUFS3-210ENST00000533105 SESN2P58004 480 aaPredicted RBP21.39■■□□□ 1.01
NDUFS3-210ENST00000533105 ARMC6Q6NXE6 501 aa21.39■■□□□ 1.01
NDUFS3-210ENST00000533105 AFTPHQ6ULP2 937 aa21.39■■□□□ 1.01
NDUFS3-210ENST00000533105 C4orf22Q6V702 233 aa21.39■■□□□ 1.01
NDUFS3-210ENST00000533105 NLRP9Q7RTR0 991 aa21.39■■□□□ 1.01
NDUFS3-210ENST00000533105 OOSP2Q86WS3 158 aa21.39■■□□□ 1.01
NDUFS3-210ENST00000533105 NLGN4XQ8N0W4 816 aa21.39■■□□□ 1.01
NDUFS3-210ENST00000533105 PPHLN1Q8NEY8 458 aaKnown RBP21.39■■□□□ 1.01
NDUFS3-210ENST00000533105 NLGN4YQ8NFZ3 816 aaPredicted RBP21.39■■□□□ 1.01
NDUFS3-210ENST00000533105 OR6P1Q8NGX9 317 aa21.39■■□□□ 1.01
NDUFS3-210ENST00000533105 ZFPM2Q8WW38 1151 aa21.39■■□□□ 1.01
NDUFS3-210ENST00000533105 KLHL6Q8WZ60 621 aa21.39■■□□□ 1.01
NDUFS3-210ENST00000533105 TTC9Q92623 222 aa21.39■■□□□ 1.01
NDUFS3-210ENST00000533105 HOMER3Q9NSC5 361 aa21.39■■□□□ 1.01
NDUFS3-210ENST00000533105 TCAF1Q9Y4C2 921 aa21.39■■□□□ 1.01
NDUFS3-210ENST00000533105 OR6C74A6NCV1 312 aa21.38■■□□□ 1.01
NDUFS3-210ENST00000533105 OR5K3A6NET4 321 aa21.38■■□□□ 1.01
NDUFS3-210ENST00000533105 GOLGA6L3A6NEY3 463 aa21.38■■□□□ 1.01
NDUFS3-210ENST00000533105 PDHA2P29803 388 aa21.38■■□□□ 1.01
NDUFS3-210ENST00000533105 TERF1P54274 439 aa21.38■■□□□ 1.01
NDUFS3-210ENST00000533105 PRAMEP78395 509 aa21.38■■□□□ 1.01
NDUFS3-210ENST00000533105 COL9A2Q14055 689 aaPredicted RBP21.38■■□□□ 1.01
NDUFS3-210ENST00000533105 ITIH4Q14624 930 aa21.38■■□□□ 1.01
NDUFS3-210ENST00000533105 DNTTIP2Q5QJE6 756 aaKnown RBP21.38■■□□□ 1.01
NDUFS3-210ENST00000533105 OR4E2Q8NGC2 313 aa21.38■■□□□ 1.01
NDUFS3-210ENST00000533105 TTC1Q99614 292 aa21.38■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms