RNA–Protein interactions for RNA: ENST00000532725.1

CPSF1-209, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 2

Gene CPSF1, Length 597 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-209ENST00000532725 LSSP48449 732 aa19.42■□□□□ 0.7
CPSF1-209ENST00000532725 GPR18Q14330 331 aa19.42■□□□□ 0.7
CPSF1-209ENST00000532725 TYSND1Q2T9J0 566 aa19.42■□□□□ 0.7
CPSF1-209ENST00000532725 TMEM71Q6P5X7 295 aa19.42■□□□□ 0.7
CPSF1-209ENST00000532725 IGDCC3Q8IVU1 814 aa19.42■□□□□ 0.7
CPSF1-209ENST00000532725 OR4D9Q8NGE8 314 aa19.42■□□□□ 0.7
CPSF1-209ENST00000532725 MDM1Q8TC05 714 aa19.42■□□□□ 0.7
CPSF1-209ENST00000532725 LIN37Q96GY3 246 aaPredicted RBP19.42■□□□□ 0.7
CPSF1-209ENST00000532725 AHCYL2Q96HN2 611 aaKnown RBP19.42■□□□□ 0.7
CPSF1-209ENST00000532725 RMDN2Q96LZ7 410 aa19.42■□□□□ 0.7
CPSF1-209ENST00000532725 EBNA1BP2Q99848 306 aaKnown RBP19.42■□□□□ 0.7
CPSF1-209ENST00000532725 DPYSL5Q9BPU6 564 aa19.42■□□□□ 0.7
CPSF1-209ENST00000532725 ERP44Q9BS26 406 aa19.42■□□□□ 0.7
CPSF1-209ENST00000532725 CARD6Q9BX69 1037 aa19.42■□□□□ 0.7
CPSF1-209ENST00000532725 CCDC86Q9H6F5 360 aaKnown RBP19.42■□□□□ 0.7
CPSF1-209ENST00000532725 IL1RAPL1Q9NZN1 696 aa19.42■□□□□ 0.7
CPSF1-209ENST00000532725 PDP2Q9P2J9 529 aa19.42■□□□□ 0.7
CPSF1-209ENST00000532725 CFAP20Q9Y6A4 193 aaKnown RBP19.42■□□□□ 0.7
CPSF1-209ENST00000532725 FREM2Q5SZK8 3169 aa19.41■□□□□ 0.7
CPSF1-209ENST00000532725 IGHV5-10-1A0A0J9YXX1 117 aa19.41■□□□□ 0.7
CPSF1-209ENST00000532725 SLC5A10A0PJK1 596 aa19.41■□□□□ 0.7
CPSF1-209ENST00000532725 TMEM8BA6NDV4 472 aa19.41■□□□□ 0.7
CPSF1-209ENST00000532725 LIN7AO14910 233 aaPredicted RBP19.41■□□□□ 0.7
CPSF1-209ENST00000532725 NDUFS3O75489 264 aa19.41■□□□□ 0.7
CPSF1-209ENST00000532725 MPOP05164 745 aa19.41■□□□□ 0.7
CPSF1-209ENST00000532725 SLC35G4P0C7Q5 338 aa19.41■□□□□ 0.7
CPSF1-209ENST00000532725 RPS3P23396 243 aaKnown RBP eCLIP19.41■□□□□ 0.7
CPSF1-209ENST00000532725 CD151P48509 253 aa19.41■□□□□ 0.7
CPSF1-209ENST00000532725 LIMK2P53671 638 aa19.41■□□□□ 0.7
CPSF1-209ENST00000532725 KIF26BQ2KJY2 2108 aa19.41■□□□□ 0.7
CPSF1-209ENST00000532725 MAP9Q49MG5 647 aa19.41■□□□□ 0.7
CPSF1-209ENST00000532725 DNAJC21Q5F1R6 531 aaKnown RBP19.41■□□□□ 0.7
CPSF1-209ENST00000532725 WDR74Q6RFH5 385 aaPredicted RBP19.41■□□□□ 0.7
CPSF1-209ENST00000532725 CILP2Q8IUL8 1156 aa19.41■□□□□ 0.7
CPSF1-209ENST00000532725 PDIK1LQ8N165 341 aa19.41■□□□□ 0.7
CPSF1-209ENST00000532725 ZFPM2Q8WW38 1151 aa19.41■□□□□ 0.7
CPSF1-209ENST00000532725 ELMO1Q92556 727 aa19.41■□□□□ 0.7
CPSF1-209ENST00000532725 NXPE2Q96DL1 559 aa19.41■□□□□ 0.7
CPSF1-209ENST00000532725 PRR11Q96HE9 360 aaPredicted RBP19.41■□□□□ 0.7
CPSF1-209ENST00000532725 C12orf66Q96MD2 445 aa19.41■□□□□ 0.7
CPSF1-209ENST00000532725 EPB41L1Q9H4G0 881 aa19.41■□□□□ 0.7
CPSF1-209ENST00000532725 POLR1BQ9H9Y6 1135 aa19.41■□□□□ 0.7
CPSF1-209ENST00000532725 IMP3Q9NV31 184 aaKnown RBP19.41■□□□□ 0.7
CPSF1-209ENST00000532725 OGFRQ9NZT2 677 aa19.41■□□□□ 0.7
CPSF1-209ENST00000532725 TMEM9Q9P0T7 183 aa19.41■□□□□ 0.7
CPSF1-209ENST00000532725 SATB2Q9UPW6 733 aa19.41■□□□□ 0.7
CPSF1-209ENST00000532725 AK5Q9Y6K8 562 aa19.41■□□□□ 0.7
CPSF1-209ENST00000532725 MAP1BP46821 2468 aaKnown RBP19.41■□□□□ 0.7
CPSF1-209ENST00000532725 CCDC187A0A096LP49 1063 aa19.4■□□□□ 0.7
CPSF1-209ENST00000532725 IQCF5A8MTL0 148 aa19.4■□□□□ 0.7
CPSF1-209ENST00000532725 F8W8V4 182 aa19.4■□□□□ 0.7
CPSF1-209ENST00000532725 TAF4O00268 1085 aa19.4■□□□□ 0.7
CPSF1-209ENST00000532725 DUX1O43812 170 aa19.4■□□□□ 0.7
CPSF1-209ENST00000532725 UBXN7O94888 489 aa19.4■□□□□ 0.7
CPSF1-209ENST00000532725 S1PR4O95977 384 aa19.4■□□□□ 0.7
CPSF1-209ENST00000532725 PGAM1P18669 254 aa19.4■□□□□ 0.7
CPSF1-209ENST00000532725 OGNP20774 298 aaKnown RBP19.4■□□□□ 0.7
CPSF1-209ENST00000532725 CCR7P32248 378 aa19.4■□□□□ 0.7
CPSF1-209ENST00000532725 PREPP48147 710 aa19.4■□□□□ 0.7
CPSF1-209ENST00000532725 CBLBQ13191 982 aa19.4■□□□□ 0.7
CPSF1-209ENST00000532725 LONRF1Q17RB8 773 aa19.4■□□□□ 0.7
CPSF1-209ENST00000532725 BBS9Q3SYG4 887 aa19.4■□□□□ 0.7
CPSF1-209ENST00000532725 DUPD1Q68J44 220 aa19.4■□□□□ 0.7
CPSF1-209ENST00000532725 NAPRTQ6XQN6 538 aa19.4■□□□□ 0.7
CPSF1-209ENST00000532725 CENPUQ71F23 418 aa19.4■□□□□ 0.7
CPSF1-209ENST00000532725 LRRC6Q86X45 466 aa19.4■□□□□ 0.7
CPSF1-209ENST00000532725 WDR36Q8NI36 951 aaKnown RBP19.4■□□□□ 0.7
CPSF1-209ENST00000532725 NCSTNQ92542 709 aa19.4■□□□□ 0.7
CPSF1-209ENST00000532725 LPGAT1Q92604 370 aa19.4■□□□□ 0.7
CPSF1-209ENST00000532725 ZNF592Q92610 1267 aa19.4■□□□□ 0.7
CPSF1-209ENST00000532725 BIRC8Q96P09 236 aa19.4■□□□□ 0.7
CPSF1-209ENST00000532725 STRADBQ9C0K7 418 aa19.4■□□□□ 0.7
CPSF1-209ENST00000532725 EPB41L5Q9HCM4 733 aa19.4■□□□□ 0.7
CPSF1-209ENST00000532725 APC2O95996 2303 aa19.39■□□□□ 0.69
CPSF1-209ENST00000532725 PMS2P1A4D2B8 440 aa19.39■□□□□ 0.69
CPSF1-209ENST00000532725 BHMG1C9JSJ3 638 aaPredicted RBP19.39■□□□□ 0.69
CPSF1-209ENST00000532725 KIF2AO00139 706 aaPredicted RBP19.39■□□□□ 0.69
CPSF1-209ENST00000532725 MPSTP25325 297 aa19.39■□□□□ 0.69
CPSF1-209ENST00000532725 ACADLP28330 430 aa19.39■□□□□ 0.69
CPSF1-209ENST00000532725 ADARP55265 1226 aaKnown RBP19.39■□□□□ 0.69
CPSF1-209ENST00000532725 GABREP78334 506 aa19.39■□□□□ 0.69
CPSF1-209ENST00000532725 PLOD1Q02809 727 aaPredicted RBP19.39■□□□□ 0.69
CPSF1-209ENST00000532725 CKAP4Q07065 602 aaKnown RBP19.39■□□□□ 0.69
CPSF1-209ENST00000532725 THOC5Q13769 683 aaKnown RBP19.39■□□□□ 0.69
CPSF1-209ENST00000532725 BRD3Q15059 726 aa19.39■□□□□ 0.69
CPSF1-209ENST00000532725 WHAMMP3Q1A5X7 153 aa19.39■□□□□ 0.69
CPSF1-209ENST00000532725 ZNF449Q6P9G9 518 aa19.39■□□□□ 0.69
CPSF1-209ENST00000532725 UNC5BQ8IZJ1 945 aa19.39■□□□□ 0.69
CPSF1-209ENST00000532725 OTUD6BQ8N6M0 293 aa19.39■□□□□ 0.69
CPSF1-209ENST00000532725 BBOF1Q8ND07 529 aa19.39■□□□□ 0.69
CPSF1-209ENST00000532725 LKAAEAR1Q8TD35 194 aa19.39■□□□□ 0.69
CPSF1-209ENST00000532725 NAT9Q9BTE0 207 aa19.39■□□□□ 0.69
CPSF1-209ENST00000532725 PLAC1Q9HBJ0 212 aa19.39■□□□□ 0.69
CPSF1-209ENST00000532725 C20orf96Q9NUD7 363 aaPredicted RBP19.39■□□□□ 0.69
CPSF1-209ENST00000532725 WHRNQ9P202 907 aa19.39■□□□□ 0.69
CPSF1-209ENST00000532725 PCDHGA8Q9Y5G5 932 aa19.39■□□□□ 0.69
CPSF1-209ENST00000532725 COLEC10Q9Y6Z7 277 aa19.39■□□□□ 0.69
CPSF1-209ENST00000532725 DMXL2Q8TDJ6 3036 aa19.39■□□□□ 0.69
CPSF1-209ENST00000532725 GPC4O75487 556 aa19.38■□□□□ 0.69
CPSF1-209ENST00000532725 DXOO77932 396 aaKnown RBP19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms