RNA–Protein interactions for RNA: ENST00000532463.5

CTNND1-231, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,749 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-231ENST00000532463 PRKCAP17252 672 aa8.03□□□□□ -1.12
CTNND1-231ENST00000532463 DRD4P21917 467 aa8.03□□□□□ -1.12
CTNND1-231ENST00000532463 MAPK3P27361 379 aaPredicted RBP8.03□□□□□ -1.12
CTNND1-231ENST00000532463 AQP1P29972 269 aa8.03□□□□□ -1.12
CTNND1-231ENST00000532463 SSR2P43308 183 aa8.03□□□□□ -1.12
CTNND1-231ENST00000532463 MAPK8P45983 427 aa8.03□□□□□ -1.12
CTNND1-231ENST00000532463 VEGFCP49767 419 aa8.03□□□□□ -1.12
CTNND1-231ENST00000532463 PRKD1Q15139 912 aaPredicted RBP8.03□□□□□ -1.12
CTNND1-231ENST00000532463 ERFEQ4G0M1 354 aa8.03□□□□□ -1.12
CTNND1-231ENST00000532463 PGM2L1Q6PCE3 622 aa8.03□□□□□ -1.12
CTNND1-231ENST00000532463 APOBEC3FQ8IUX4 373 aaKnown RBP8.03□□□□□ -1.12
CTNND1-231ENST00000532463 FAM71E2Q8N5Q1 922 aa8.03□□□□□ -1.12
CTNND1-231ENST00000532463 XAGE5Q8WWM1 108 aa8.03□□□□□ -1.12
CTNND1-231ENST00000532463 CERS2Q96G23 380 aa8.03□□□□□ -1.12
CTNND1-231ENST00000532463 SULT4A1Q9BR01 284 aa8.03□□□□□ -1.12
CTNND1-231ENST00000532463 OSGEPQ9NPF4 335 aa8.03□□□□□ -1.12
CTNND1-231ENST00000532463 CNOT6Q9ULM6 557 aaKnown RBP8.03□□□□□ -1.12
CTNND1-231ENST00000532463 KCNS2Q9ULS6 477 aa8.03□□□□□ -1.12
CTNND1-231ENST00000532463 WDR45Q9Y484 360 aa8.03□□□□□ -1.12
CTNND1-231ENST00000532463 C20orf202A1L168 122 aa8.03□□□□□ -1.12
CTNND1-231ENST00000532463 APOC4-APOC2K7ER74 178 aa8.03□□□□□ -1.12
CTNND1-231ENST00000532463 ATG13O75143 517 aa8.03□□□□□ -1.12
CTNND1-231ENST00000532463 H6PDO95479 791 aa8.03□□□□□ -1.12
CTNND1-231ENST00000532463 PAK4O96013 591 aaPredicted RBP8.03□□□□□ -1.12
CTNND1-231ENST00000532463 APOC2P02655 101 aa8.03□□□□□ -1.12
CTNND1-231ENST00000532463 DDX6P26196 483 aaKnown RBP eCLIP8.03□□□□□ -1.121e-7■■□□□ 13.6
CTNND1-231ENST00000532463 FXYD6P3P58550 94 aa8.03□□□□□ -1.12
CTNND1-231ENST00000532463 RTP1P59025 263 aa8.03□□□□□ -1.12
CTNND1-231ENST00000532463 MVKQ03426 396 aa8.03□□□□□ -1.12
CTNND1-231ENST00000532463 PTPN11Q06124 597 aaPredicted RBP8.03□□□□□ -1.12
CTNND1-231ENST00000532463 SPOCK1Q08629 439 aa8.03□□□□□ -1.12
CTNND1-231ENST00000532463 GRAPQ13588 217 aa8.03□□□□□ -1.12
CTNND1-231ENST00000532463 PTCH1Q13635 1447 aa8.03□□□□□ -1.12
CTNND1-231ENST00000532463 CPSF6Q16630 551 aaKnown RBP eCLIP8.03□□□□□ -1.12
CTNND1-231ENST00000532463 TMEM53Q6P2H8 277 aa8.03□□□□□ -1.12
CTNND1-231ENST00000532463 MARCH9Q86YJ5 346 aa8.03□□□□□ -1.12
CTNND1-231ENST00000532463 PSTKQ8IV42 348 aaKnown RBP8.03□□□□□ -1.12
CTNND1-231ENST00000532463 GMCL1P1Q8NEA9 526 aa8.03□□□□□ -1.12
CTNND1-231ENST00000532463 SPATA20Q8TB22 786 aa8.03□□□□□ -1.12
CTNND1-231ENST00000532463 GRAPLQ8TC17 118 aaPredicted RBP8.03□□□□□ -1.12
CTNND1-231ENST00000532463 MFSD14AQ96MC6 490 aa8.03□□□□□ -1.12
CTNND1-231ENST00000532463 DCSTAMPQ9H295 470 aa8.03□□□□□ -1.12
CTNND1-231ENST00000532463 OR2S2Q9NQN1 319 aa8.03□□□□□ -1.12
CTNND1-231ENST00000532463 DUSP10Q9Y6W6 482 aa8.03□□□□□ -1.12
CTNND1-231ENST00000532463 RFX7Q2KHR2 1363 aa8.03□□□□□ -1.12
CTNND1-231ENST00000532463 ZMYM2Q9UBW7 1377 aa8.03□□□□□ -1.12
CTNND1-231ENST00000532463 SH3PXD2BA1X283 911 aa8.02□□□□□ -1.12
CTNND1-231ENST00000532463 ISM1B1AKI9 464 aa8.02□□□□□ -1.12
CTNND1-231ENST00000532463 INMT-MINDY4F8WBC2 141 aa8.02□□□□□ -1.12
CTNND1-231ENST00000532463 ZNF254O75437 659 aa8.02□□□□□ -1.12
CTNND1-231ENST00000532463 CAPN3P20807 821 aa8.02□□□□□ -1.12
CTNND1-231ENST00000532463 GNRHRP30968 328 aa8.02□□□□□ -1.12
CTNND1-231ENST00000532463 RPL13AP40429 203 aaKnown RBP8.02□□□□□ -1.12
CTNND1-231ENST00000532463 CAMLGP49069 296 aa8.02□□□□□ -1.12
CTNND1-231ENST00000532463 ANTXR2P58335 489 aa8.02□□□□□ -1.12
CTNND1-231ENST00000532463 HTRA4P83105 476 aaPredicted RBP8.02□□□□□ -1.12
CTNND1-231ENST00000532463 EXOC3L2Q2M3D2 409 aa8.02□□□□□ -1.12
CTNND1-231ENST00000532463 ANKDD1AQ495B1 522 aa8.02□□□□□ -1.12
CTNND1-231ENST00000532463 TFAP2DQ7Z6R9 452 aa8.02□□□□□ -1.12
CTNND1-231ENST00000532463 ARL14Q8N4G2 192 aa8.02□□□□□ -1.12
CTNND1-231ENST00000532463 CPT1CQ8TCG5 803 aa8.02□□□□□ -1.12
CTNND1-231ENST00000532463 CXorf40AQ8TE69 158 aa8.02□□□□□ -1.12
CTNND1-231ENST00000532463 MITD1Q8WV92 249 aa8.02□□□□□ -1.12
CTNND1-231ENST00000532463 AGAP2Q99490 1192 aa8.02□□□□□ -1.12
CTNND1-231ENST00000532463 SH2D3AQ9BRG2 576 aa8.02□□□□□ -1.12
CTNND1-231ENST00000532463 DDX43Q9NXZ2 648 aaKnown RBP8.02□□□□□ -1.12
CTNND1-231ENST00000532463 ZNF282Q9UDV7 671 aaPredicted RBP8.02□□□□□ -1.12
CTNND1-231ENST00000532463 DNMT3LQ9UJW3 386 aa8.02□□□□□ -1.12
CTNND1-231ENST00000532463 KHNYNO15037 678 aaKnown RBP8.02□□□□□ -1.13
CTNND1-231ENST00000532463 SCAF4O95104 1147 aaKnown RBP8.02□□□□□ -1.13
CTNND1-231ENST00000532463 MATN4O95460 622 aa8.02□□□□□ -1.13
CTNND1-231ENST00000532463 ZBTB48P10074 688 aaPredicted RBP8.02□□□□□ -1.13
CTNND1-231ENST00000532463 RAB3BP20337 219 aa8.02□□□□□ -1.13
CTNND1-231ENST00000532463 ACVR2AP27037 513 aa8.02□□□□□ -1.13
CTNND1-231ENST00000532463 CERS1P27544 350 aa8.02□□□□□ -1.13
CTNND1-231ENST00000532463 CCR10P46092 362 aa8.02□□□□□ -1.13
CTNND1-231ENST00000532463 OR12D2P58182 307 aa8.02□□□□□ -1.13
CTNND1-231ENST00000532463 HERVK_113P62684 666 aa8.02□□□□□ -1.13
CTNND1-231ENST00000532463 ELAVL2Q12926 359 aaKnown RBP8.02□□□□□ -1.13
CTNND1-231ENST00000532463 GRIK2Q13002 908 aa8.02□□□□□ -1.13
CTNND1-231ENST00000532463 ABRAXAS2Q15018 415 aa8.02□□□□□ -1.13
CTNND1-231ENST00000532463 FAM153CQ494X1 144 aa8.02□□□□□ -1.13
CTNND1-231ENST00000532463 RBM48Q5RL73 367 aaKnown RBP8.02□□□□□ -1.13
CTNND1-231ENST00000532463 FAM122CQ6P4D5 195 aa8.02□□□□□ -1.13
CTNND1-231ENST00000532463 SCIMPQ6UWF3 145 aa8.02□□□□□ -1.13
CTNND1-231ENST00000532463 UNC5AQ6ZN44 842 aa8.02□□□□□ -1.13
CTNND1-231ENST00000532463 GTF2H5Q6ZYL4 71 aa8.02□□□□□ -1.13
CTNND1-231ENST00000532463 TSPAN33Q86UF1 283 aa8.02□□□□□ -1.13
CTNND1-231ENST00000532463 ALYREFQ86V81 257 aaKnown RBP8.02□□□□□ -1.13
CTNND1-231ENST00000532463 SLC22A15Q8IZD6 547 aa8.02□□□□□ -1.13
CTNND1-231ENST00000532463 ENGASEQ8NFI3 743 aa8.02□□□□□ -1.13
CTNND1-231ENST00000532463 S100A16Q96FQ6 103 aaKnown RBP8.02□□□□□ -1.13
CTNND1-231ENST00000532463 MCCC2Q9HCC0 563 aa8.02□□□□□ -1.13
CTNND1-231ENST00000532463 ETNK2Q9NVF9 386 aa8.02□□□□□ -1.13
CTNND1-231ENST00000532463 PIH1D1Q9NWS0 290 aaKnown RBP8.02□□□□□ -1.13
CTNND1-231ENST00000532463 CDH22Q9UJ99 828 aa8.02□□□□□ -1.13
CTNND1-231ENST00000532463 A0A087X0B3 334 aa8.02□□□□□ -1.13
CTNND1-231ENST00000532463 BOLA2-SMG1P6H3BVE0 249 aa8.02□□□□□ -1.13
CTNND1-231ENST00000532463 GPR182O15218 404 aa8.02□□□□□ -1.13
CTNND1-231ENST00000532463 RFPL1O75677 317 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms