RNA–Protein interactions for RNA: ENST00000532149.1

CHD7-211, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 2

Gene CHD7, Length 616 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-211ENST00000532149 ZIM2Q9NZV7 527 aa12.08□□□□□ -0.48
CHD7-211ENST00000532149 SLC7A8Q9UHI5 535 aa12.08□□□□□ -0.48
CHD7-211ENST00000532149 TSR3Q9UJK0 312 aaKnown RBP12.08□□□□□ -0.48
CHD7-211ENST00000532149 PPM1HQ9ULR3 514 aa12.08□□□□□ -0.48
CHD7-211ENST00000532149 MAPRE3Q9UPY8 281 aa12.08□□□□□ -0.48
CHD7-211ENST00000532149 MTF2Q9Y483 593 aaPredicted RBP12.08□□□□□ -0.48
CHD7-211ENST00000532149 BPTFQ12830 3046 aa12.08□□□□□ -0.48
CHD7-211ENST00000532149 C15orf38-AP3S2A0A0A6YYH1 394 aa12.07□□□□□ -0.48
CHD7-211ENST00000532149 C17orf113A0A1B0GUU1 675 aa12.07□□□□□ -0.48
CHD7-211ENST00000532149 TTC34A8MYJ7 566 aa12.07□□□□□ -0.48
CHD7-211ENST00000532149 GFYI3L273 518 aa12.07□□□□□ -0.48
CHD7-211ENST00000532149 RGS14O43566 566 aa12.07□□□□□ -0.48
CHD7-211ENST00000532149 AP1G1O43747 822 aa12.07□□□□□ -0.48
CHD7-211ENST00000532149 VEGFDO43915 354 aa12.07□□□□□ -0.48
CHD7-211ENST00000532149 BNIP3LO60238 219 aa12.07□□□□□ -0.48
CHD7-211ENST00000532149 NRP2O60462 931 aa12.07□□□□□ -0.48
CHD7-211ENST00000532149 DNAJA2O60884 412 aa12.07□□□□□ -0.48
CHD7-211ENST00000532149 RNASEH1O60930 286 aaKnown RBP12.07□□□□□ -0.48
CHD7-211ENST00000532149 ATG13O75143 517 aa12.07□□□□□ -0.48
CHD7-211ENST00000532149 STK16O75716 305 aa12.07□□□□□ -0.48
CHD7-211ENST00000532149 SLCO2B1O94956 709 aa12.07□□□□□ -0.48
CHD7-211ENST00000532149 KRT6AP02538 564 aa12.07□□□□□ -0.48
CHD7-211ENST00000532149 KRT6BP04259 564 aa12.07□□□□□ -0.48
CHD7-211ENST00000532149 HGFP14210 728 aa12.07□□□□□ -0.48
CHD7-211ENST00000532149 UGT1A6P19224 532 aa12.07□□□□□ -0.48
CHD7-211ENST00000532149 ITGAXP20702 1163 aa12.07□□□□□ -0.48
CHD7-211ENST00000532149 UGT1A1P22309 533 aa12.07□□□□□ -0.48
CHD7-211ENST00000532149 UGT1A4P22310 534 aa12.07□□□□□ -0.48
CHD7-211ENST00000532149 ME2P23368 584 aa12.07□□□□□ -0.48
CHD7-211ENST00000532149 TEAD1P28347 426 aa12.07□□□□□ -0.48
CHD7-211ENST00000532149 AKT1P31749 480 aa12.07□□□□□ -0.48
CHD7-211ENST00000532149 UGT1A3P35503 534 aa12.07□□□□□ -0.48
CHD7-211ENST00000532149 UGT1A5P35504 534 aa12.07□□□□□ -0.48
CHD7-211ENST00000532149 VHLP40337 213 aa12.07□□□□□ -0.48
CHD7-211ENST00000532149 GRIA2P42262 883 aa12.07□□□□□ -0.48
CHD7-211ENST00000532149 MTHFRP42898 656 aa12.07□□□□□ -0.48
CHD7-211ENST00000532149 TNFRSF4P43489 277 aa12.07□□□□□ -0.48
CHD7-211ENST00000532149 KRT6CP48668 564 aa12.07□□□□□ -0.48
CHD7-211ENST00000532149 RPIAP49247 311 aa12.07□□□□□ -0.48
CHD7-211ENST00000532149 NUDT2P50583 147 aa12.07□□□□□ -0.48
CHD7-211ENST00000532149 PCDH1Q08174 1060 aa12.07□□□□□ -0.48
CHD7-211ENST00000532149 RUNX3Q13761 415 aa12.07□□□□□ -0.48
CHD7-211ENST00000532149 GGTA1PQ4G0N0 100 aa12.07□□□□□ -0.48
CHD7-211ENST00000532149 TMEM52BQ4KMG9 183 aa12.07□□□□□ -0.48
CHD7-211ENST00000532149 ATP6AP1LQ52LC2 224 aa12.07□□□□□ -0.48
CHD7-211ENST00000532149 PDCD4Q53EL6 469 aaKnown RBP12.07□□□□□ -0.48
CHD7-211ENST00000532149 FNDC3BQ53EP0 1204 aaKnown RBP12.07□□□□□ -0.48
CHD7-211ENST00000532149 XKR7Q5GH72 579 aa12.07□□□□□ -0.48
CHD7-211ENST00000532149 IRAK1BP1Q5VVH5 260 aa12.07□□□□□ -0.48
CHD7-211ENST00000532149 PPP2R2DQ66LE6 453 aa12.07□□□□□ -0.48
CHD7-211ENST00000532149 FBXL19Q6PCT2 694 aa12.07□□□□□ -0.48
CHD7-211ENST00000532149 TMC5Q6UXY8 1006 aa12.07□□□□□ -0.48
CHD7-211ENST00000532149 ARPINQ7Z6K5 226 aa12.07□□□□□ -0.48
CHD7-211ENST00000532149 TSPAN33Q86UF1 283 aa12.07□□□□□ -0.48
CHD7-211ENST00000532149 MYLK4Q86YV6 388 aaPredicted RBP12.07□□□□□ -0.48
CHD7-211ENST00000532149 DDIASQ8IXT1 998 aa12.07□□□□□ -0.48
CHD7-211ENST00000532149 TERB1Q8NA31 727 aa12.07□□□□□ -0.48
CHD7-211ENST00000532149 CHST14Q8NCH0 376 aa12.07□□□□□ -0.48
CHD7-211ENST00000532149 GLB1L3Q8NCI6 653 aaPredicted RBP12.07□□□□□ -0.48
CHD7-211ENST00000532149 FBXO15Q8NCQ5 510 aaPredicted RBP12.07□□□□□ -0.48
CHD7-211ENST00000532149 ASB11Q8WXH4 323 aa12.07□□□□□ -0.48
CHD7-211ENST00000532149 GLMNQ92990 594 aa12.07□□□□□ -0.48
CHD7-211ENST00000532149 EXT2Q93063 718 aa12.07□□□□□ -0.48
CHD7-211ENST00000532149 GLYATL1Q969I3 302 aa12.07□□□□□ -0.48
CHD7-211ENST00000532149 RHBDF1Q96CC6 855 aa12.07□□□□□ -0.48
CHD7-211ENST00000532149 TUBGCP3Q96CW5 907 aa12.07□□□□□ -0.48
CHD7-211ENST00000532149 LRCH3Q96II8 777 aa12.07□□□□□ -0.48
CHD7-211ENST00000532149 CATSPER2Q96P56 530 aa12.07□□□□□ -0.48
CHD7-211ENST00000532149 EGFL8Q99944 293 aa12.07□□□□□ -0.48
CHD7-211ENST00000532149 BRINP2Q9C0B6 783 aa12.07□□□□□ -0.48
CHD7-211ENST00000532149 NSUN3Q9H649 340 aaKnown RBP12.07□□□□□ -0.48
CHD7-211ENST00000532149 AKTIPQ9H8T0 292 aa12.07□□□□□ -0.48
CHD7-211ENST00000532149 WWOXQ9NZC7 414 aa12.07□□□□□ -0.48
CHD7-211ENST00000532149 GPR34Q9UPC5 381 aa12.07□□□□□ -0.48
CHD7-211ENST00000532149 FNDC3AQ9Y2H6 1198 aaKnown RBP12.07□□□□□ -0.48
CHD7-211ENST00000532149 DNMT3AQ9Y6K1 912 aaPredicted RBP12.07□□□□□ -0.48
CHD7-211ENST00000532149 NPIPB8E9PQR5 432 aa12.06□□□□□ -0.48
CHD7-211ENST00000532149 NRG2O14511 850 aaPredicted RBP12.06□□□□□ -0.48
CHD7-211ENST00000532149 LIN7AO14910 233 aaPredicted RBP12.06□□□□□ -0.48
CHD7-211ENST00000532149 SKAP2O75563 359 aaPredicted RBP12.06□□□□□ -0.48
CHD7-211ENST00000532149 SIX3O95343 332 aaPredicted RBP12.06□□□□□ -0.48
CHD7-211ENST00000532149 ANP32DO95626 131 aa12.06□□□□□ -0.48
CHD7-211ENST00000532149 HOXB6P17509 224 aaKnown RBP12.06□□□□□ -0.48
CHD7-211ENST00000532149 PSMC3P17980 439 aa12.06□□□□□ -0.48
CHD7-211ENST00000532149 MAP4P27816 1152 aaKnown RBP12.06□□□□□ -0.48
CHD7-211ENST00000532149 HMOX2P30519 316 aa12.06□□□□□ -0.48
CHD7-211ENST00000532149 GKP32189 559 aa12.06□□□□□ -0.48
CHD7-211ENST00000532149 CPA2P48052 419 aa12.06□□□□□ -0.48
CHD7-211ENST00000532149 PGGT1BP53609 377 aa12.06□□□□□ -0.48
CHD7-211ENST00000532149 PNLIPRP1P54315 467 aa12.06□□□□□ -0.48
CHD7-211ENST00000532149 CDH13P55290 713 aa12.06□□□□□ -0.48
CHD7-211ENST00000532149 EMX2Q04743 252 aa12.06□□□□□ -0.48
CHD7-211ENST00000532149 CBX2Q14781 532 aaPredicted RBP12.06□□□□□ -0.48
CHD7-211ENST00000532149 KPNB1Q14974 876 aaKnown RBP12.06□□□□□ -0.48
CHD7-211ENST00000532149 SHHQ15465 462 aa12.06□□□□□ -0.48
CHD7-211ENST00000532149 BCL7AQ4VC05 210 aa12.06□□□□□ -0.48
CHD7-211ENST00000532149 SAMD4BQ5PRF9 694 aaKnown RBP12.06□□□□□ -0.48
CHD7-211ENST00000532149 ZNF697Q5TEC3 545 aa12.06□□□□□ -0.48
CHD7-211ENST00000532149 ANKRD54Q6NXT1 300 aa12.06□□□□□ -0.48
CHD7-211ENST00000532149 LIPIQ6XZB0 460 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 84.1 ms