RNA–Protein interactions for RNA: ENST00000531303.5

SMPD1-205, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,451 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-205ENST00000531303 COG4Q9H9E3 785 aa18.69■□□□□ 0.58
SMPD1-205ENST00000531303 LATS2Q9NRM7 1088 aa18.69■□□□□ 0.58
SMPD1-205ENST00000531303 SUSD2Q9UGT4 822 aa18.69■□□□□ 0.58
SMPD1-205ENST00000531303 ANKRD6Q9Y2G4 727 aa18.69■□□□□ 0.58
SMPD1-205ENST00000531303 DNMT3AQ9Y6K1 912 aaPredicted RBP18.69■□□□□ 0.58
SMPD1-205ENST00000531303 PRR5-ARHGAP8B1AHC4 643 aa18.68■□□□□ 0.58
SMPD1-205ENST00000531303 SNX2O60749 519 aa18.68■□□□□ 0.58
SMPD1-205ENST00000531303 WISP3O95389 354 aaPredicted RBP18.68■□□□□ 0.58
SMPD1-205ENST00000531303 CFIP05156 583 aa18.68■□□□□ 0.58
SMPD1-205ENST00000531303 LTA4HP09960 611 aaKnown RBP18.68■□□□□ 0.58
SMPD1-205ENST00000531303 JUNDP17535 347 aa18.68■□□□□ 0.58
SMPD1-205ENST00000531303 AK4P27144 223 aaPredicted RBP18.68■□□□□ 0.58
SMPD1-205ENST00000531303 PDHA2P29803 388 aa18.68■□□□□ 0.58
SMPD1-205ENST00000531303 RGS4P49798 205 aa18.68■□□□□ 0.58
SMPD1-205ENST00000531303 SEPT7Q16181 437 aaKnown RBP18.68■□□□□ 0.58
SMPD1-205ENST00000531303 KIF19Q2TAC6 998 aa18.68■□□□□ 0.58
SMPD1-205ENST00000531303 PLEKHS1Q5SXH7 462 aa18.68■□□□□ 0.58
SMPD1-205ENST00000531303 C16orf46Q6P387 395 aa18.68■□□□□ 0.58
SMPD1-205ENST00000531303 PHACTR4Q8IZ21 702 aa18.68■□□□□ 0.58
SMPD1-205ENST00000531303 OXR1Q8N573 874 aa18.68■□□□□ 0.58
SMPD1-205ENST00000531303 NKAPQ8N5F7 415 aaKnown RBP18.68■□□□□ 0.58
SMPD1-205ENST00000531303 BANPQ8N9N5 519 aa18.68■□□□□ 0.58
SMPD1-205ENST00000531303 CCL4L1Q8NHW4 92 aa18.68■□□□□ 0.58
SMPD1-205ENST00000531303 SCYL1Q96KG9 808 aa18.68■□□□□ 0.58
SMPD1-205ENST00000531303 FSCN3Q9NQT6 498 aa18.68■□□□□ 0.58
SMPD1-205ENST00000531303 IGSF5Q9NSI5 407 aa18.68■□□□□ 0.58
SMPD1-205ENST00000531303 DGKBQ9Y6T7 804 aa18.68■□□□□ 0.58
SMPD1-205ENST00000531303 CACNA1HO95180 2353 aa18.68■□□□□ 0.58
SMPD1-205ENST00000531303 CACNA1EQ15878 2313 aa18.67■□□□□ 0.58
SMPD1-205ENST00000531303 C17orf113A0A1B0GUU1 675 aa18.67■□□□□ 0.58
SMPD1-205ENST00000531303 SLC5A10A0PJK1 596 aa18.67■□□□□ 0.58
SMPD1-205ENST00000531303 KLHL2O95198 593 aa18.67■□□□□ 0.58
SMPD1-205ENST00000531303 CTSEP14091 401 aa18.67■□□□□ 0.58
SMPD1-205ENST00000531303 VCLP18206 1134 aa18.67■□□□□ 0.58
SMPD1-205ENST00000531303 RPL10P27635 214 aaKnown RBP18.67■□□□□ 0.58
SMPD1-205ENST00000531303 CCT5P48643 541 aa18.67■□□□□ 0.58
SMPD1-205ENST00000531303 IRX4P78413 519 aa18.67■□□□□ 0.58
SMPD1-205ENST00000531303 CTBSQ01459 385 aa18.67■□□□□ 0.58
SMPD1-205ENST00000531303 ABRQ12979 859 aa18.67■□□□□ 0.58
SMPD1-205ENST00000531303 C1orf61Q13536 156 aa18.67■□□□□ 0.58
SMPD1-205ENST00000531303 ZNF658BQ4V348 819 aaPredicted RBP18.67■□□□□ 0.58
SMPD1-205ENST00000531303 ZC3H14Q6PJT7 736 aaKnown RBP18.67■□□□□ 0.58
SMPD1-205ENST00000531303 CDHR3Q6ZTQ4 885 aa18.67■□□□□ 0.58
SMPD1-205ENST00000531303 CLEC14AQ86T13 490 aa18.67■□□□□ 0.58
SMPD1-205ENST00000531303 APOPT1Q96IL0 206 aa18.67■□□□□ 0.58
SMPD1-205ENST00000531303 TIMM29Q9BSF4 260 aa18.67■□□□□ 0.58
SMPD1-205ENST00000531303 IQCGQ9H095 443 aaKnown RBP18.67■□□□□ 0.58
SMPD1-205ENST00000531303 KLHL42Q9P2K6 505 aa18.67■□□□□ 0.58
SMPD1-205ENST00000531303 DCDC2Q9UHG0 476 aa18.67■□□□□ 0.58
SMPD1-205ENST00000531303 RAB23Q9ULC3 237 aa18.67■□□□□ 0.58
SMPD1-205ENST00000531303 PSMD13Q9UNM6 376 aa18.67■□□□□ 0.58
SMPD1-205ENST00000531303 CDYLQ9Y232 598 aa18.67■□□□□ 0.58
SMPD1-205ENST00000531303 SNX11Q9Y5W9 270 aa18.67■□□□□ 0.58
SMPD1-205ENST00000531303 ST14Q9Y5Y6 855 aa18.67■□□□□ 0.58
SMPD1-205ENST00000531303 ACTL7BQ9Y614 415 aa18.67■□□□□ 0.58
SMPD1-205ENST00000531303 TMEM131Q92545 1883 aa18.67■□□□□ 0.58
SMPD1-205ENST00000531303 ADAMTS9Q9P2N4 1935 aa18.66■□□□□ 0.58
SMPD1-205ENST00000531303 LIN7AO14910 233 aaPredicted RBP18.66■□□□□ 0.58
SMPD1-205ENST00000531303 GPC4O75487 556 aa18.66■□□□□ 0.58
SMPD1-205ENST00000531303 SLC34A2O95436 690 aa18.66■□□□□ 0.58
SMPD1-205ENST00000531303 TSPAN12O95859 305 aa18.66■□□□□ 0.58
SMPD1-205ENST00000531303 GSTM1P09488 218 aa18.66■□□□□ 0.58
SMPD1-205ENST00000531303 GSTM4Q03013 218 aa18.66■□□□□ 0.58
SMPD1-205ENST00000531303 CCDC6Q16204 474 aa18.66■□□□□ 0.58
SMPD1-205ENST00000531303 FAM83EQ2M2I3 478 aa18.66■□□□□ 0.58
SMPD1-205ENST00000531303 SLC30A9Q6PML9 568 aa18.66■□□□□ 0.58
SMPD1-205ENST00000531303 XKR5Q6UX68 686 aa18.66■□□□□ 0.58
SMPD1-205ENST00000531303 CCDC91Q7Z6B0 441 aa18.66■□□□□ 0.58
SMPD1-205ENST00000531303 MYO1HQ8N1T3 1032 aa18.66■□□□□ 0.58
SMPD1-205ENST00000531303 ANKRD42Q8N9B4 389 aa18.66■□□□□ 0.58
SMPD1-205ENST00000531303 CFAP61Q8NHU2 1237 aa18.66■□□□□ 0.58
SMPD1-205ENST00000531303 ALKBH8Q96BT7 664 aaKnown RBP18.66■□□□□ 0.58
SMPD1-205ENST00000531303 PKNOX2Q96KN3 472 aa18.66■□□□□ 0.58
SMPD1-205ENST00000531303 UBXN10Q96LJ8 280 aa18.66■□□□□ 0.58
SMPD1-205ENST00000531303 TMEM216Q9P0N5 145 aa18.66■□□□□ 0.58
SMPD1-205ENST00000531303 APOBEC3BQ9UH17 382 aaKnown RBP18.66■□□□□ 0.58
SMPD1-205ENST00000531303 IKZF3Q9UKT9 509 aa18.66■□□□□ 0.58
SMPD1-205ENST00000531303 WDFY4Q6ZS81 3184 aa18.65■□□□□ 0.58
SMPD1-205ENST00000531303 PATE3B3GLJ2 98 aa18.65■□□□□ 0.58
SMPD1-205ENST00000531303 H3BM21 787 aa18.65■□□□□ 0.58
SMPD1-205ENST00000531303 CDC7O00311 574 aa18.65■□□□□ 0.58
SMPD1-205ENST00000531303 BTN3A1O00481 513 aa18.65■□□□□ 0.58
SMPD1-205ENST00000531303 ZBTB14O43829 449 aa18.65■□□□□ 0.58
SMPD1-205ENST00000531303 GLRA3O75311 464 aa18.65■□□□□ 0.58
SMPD1-205ENST00000531303 SLCO2B1O94956 709 aa18.65■□□□□ 0.58
SMPD1-205ENST00000531303 CELA2BP08218 269 aaPredicted RBP18.65■□□□□ 0.58
SMPD1-205ENST00000531303 CBSLP0DN79 551 aa18.65■□□□□ 0.58
SMPD1-205ENST00000531303 COL6A2P12110 1019 aa18.65■□□□□ 0.58
SMPD1-205ENST00000531303 CD1DP15813 335 aa18.65■□□□□ 0.58
SMPD1-205ENST00000531303 CRHR1P34998 444 aa18.65■□□□□ 0.58
SMPD1-205ENST00000531303 RPA3P35244 121 aaPredicted RBP18.65■□□□□ 0.58
SMPD1-205ENST00000531303 CBSP35520 551 aa18.65■□□□□ 0.58
SMPD1-205ENST00000531303 ACTR1BP42025 376 aa18.65■□□□□ 0.58
SMPD1-205ENST00000531303 BLKP51451 505 aa18.65■□□□□ 0.58
SMPD1-205ENST00000531303 ACTR1AP61163 376 aa18.65■□□□□ 0.58
SMPD1-205ENST00000531303 PRRT3Q5FWE3 981 aa18.65■□□□□ 0.58
SMPD1-205ENST00000531303 N4BP2L1Q5TBK1 243 aaPredicted RBP18.65■□□□□ 0.58
SMPD1-205ENST00000531303 AGAP9Q5VTM2 703 aa18.65■□□□□ 0.58
SMPD1-205ENST00000531303 PRSS33Q8NF86 280 aa18.65■□□□□ 0.58
SMPD1-205ENST00000531303 DERL2Q9GZP9 239 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms