RNA–Protein interactions for RNA: ENST00000530893.6

BRCA2-204, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA2, Length 2,011 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-204ENST00000530893 CYP20A1Q6UW02 462 aa16.94■□□□□ 0.3
BRCA2-204ENST00000530893 RBM44Q6ZP01 1051 aaKnown RBP16.94■□□□□ 0.3
BRCA2-204ENST00000530893 DDX53Q86TM3 631 aaKnown RBP16.94■□□□□ 0.3
BRCA2-204ENST00000530893 GRIP2Q9C0E4 1043 aa16.94■□□□□ 0.3
BRCA2-204ENST00000530893 RBM38Q9H0Z9 239 aaKnown RBP16.94■□□□□ 0.3
BRCA2-204ENST00000530893 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.94■□□□□ 0.3
BRCA2-204ENST00000530893 MAGEL2Q9UJ55 1249 aa16.94■□□□□ 0.3
BRCA2-204ENST00000530893 CRLS1Q9UJA2 301 aa16.94■□□□□ 0.3
BRCA2-204ENST00000530893 ANAPC2Q9UJX6 822 aa16.94■□□□□ 0.3
BRCA2-204ENST00000530893 AK5Q9Y6K8 562 aa16.94■□□□□ 0.3
BRCA2-204ENST00000530893 H3BNH8 94 aa16.93■□□□□ 0.3
BRCA2-204ENST00000530893 VILLO15195 856 aa16.93■□□□□ 0.3
BRCA2-204ENST00000530893 SMAD6O43541 496 aaKnown RBP16.93■□□□□ 0.3
BRCA2-204ENST00000530893 RGS14O43566 566 aa16.93■□□□□ 0.3
BRCA2-204ENST00000530893 OR6B1O95007 311 aa16.93■□□□□ 0.3
BRCA2-204ENST00000530893 CBSLP0DN79 551 aa16.93■□□□□ 0.3
BRCA2-204ENST00000530893 ZNF23P17027 643 aa16.93■□□□□ 0.3
BRCA2-204ENST00000530893 BPIP17213 487 aa16.93■□□□□ 0.3
BRCA2-204ENST00000530893 CBSP35520 551 aa16.93■□□□□ 0.3
BRCA2-204ENST00000530893 ATP6AP1Q15904 470 aa16.93■□□□□ 0.3
BRCA2-204ENST00000530893 AP5B1Q2VPB7 878 aa16.93■□□□□ 0.3
BRCA2-204ENST00000530893 CDKL4Q5MAI5 379 aa16.93■□□□□ 0.3
BRCA2-204ENST00000530893 TXNDC8Q6A555 127 aa16.93■□□□□ 0.3
BRCA2-204ENST00000530893 TTC23LQ6PF05 361 aa16.93■□□□□ 0.3
BRCA2-204ENST00000530893 SPRED1Q7Z699 444 aa16.93■□□□□ 0.3
BRCA2-204ENST00000530893 CBR4Q8N4T8 237 aa16.93■□□□□ 0.3
BRCA2-204ENST00000530893 AADATQ8N5Z0 425 aa16.93■□□□□ 0.3
BRCA2-204ENST00000530893 PAF1Q8N7H5 531 aa16.93■□□□□ 0.3
BRCA2-204ENST00000530893 ZNF689Q96CS4 500 aaPredicted RBP16.93■□□□□ 0.3
BRCA2-204ENST00000530893 RMND5BQ96G75 393 aaPredicted RBP16.93■□□□□ 0.3
BRCA2-204ENST00000530893 BOCQ9BWV1 1114 aa16.93■□□□□ 0.3
BRCA2-204ENST00000530893 CD244Q9BZW8 370 aa16.93■□□□□ 0.3
BRCA2-204ENST00000530893 NSUN3Q9H649 340 aaKnown RBP16.93■□□□□ 0.3
BRCA2-204ENST00000530893 OPTCQ9UBM4 332 aa16.93■□□□□ 0.3
BRCA2-204ENST00000530893 PCDHB3Q9Y5E6 796 aa16.93■□□□□ 0.3
BRCA2-204ENST00000530893 ANKRD28O15084 1053 aa16.92■□□□□ 0.3
BRCA2-204ENST00000530893 TAPBPO15533 448 aa16.92■□□□□ 0.3
BRCA2-204ENST00000530893 FKTNO75072 461 aa16.92■□□□□ 0.3
BRCA2-204ENST00000530893 RASAL1O95294 804 aa16.92■□□□□ 0.3
BRCA2-204ENST00000530893 CLDN7O95471 211 aa16.92■□□□□ 0.3
BRCA2-204ENST00000530893 G6PDP11413 515 aa16.92■□□□□ 0.3
BRCA2-204ENST00000530893 LAG3P18627 525 aa16.92■□□□□ 0.3
BRCA2-204ENST00000530893 OXTRP30559 389 aa16.92■□□□□ 0.3
BRCA2-204ENST00000530893 RFC2P35250 354 aa16.92■□□□□ 0.3
BRCA2-204ENST00000530893 CASP2P42575 452 aa16.92■□□□□ 0.3
BRCA2-204ENST00000530893 HTR6P50406 440 aa16.92■□□□□ 0.3
BRCA2-204ENST00000530893 SLC7A9P82251 487 aa16.92■□□□□ 0.3
BRCA2-204ENST00000530893 TPGS1Q6ZTW0 290 aa16.92■□□□□ 0.3
BRCA2-204ENST00000530893 IFNEQ86WN2 208 aa16.92■□□□□ 0.3
BRCA2-204ENST00000530893 CMTR2Q8IYT2 770 aaKnown RBP16.92■□□□□ 0.3
BRCA2-204ENST00000530893 DCBLD1Q8N8Z6 715 aa16.92■□□□□ 0.3
BRCA2-204ENST00000530893 OR6K2Q8NGY2 324 aa16.92■□□□□ 0.3
BRCA2-204ENST00000530893 FIBINQ8TAL6 211 aa16.92■□□□□ 0.3
BRCA2-204ENST00000530893 MRPS31Q92665 395 aaKnown RBP16.92■□□□□ 0.3
BRCA2-204ENST00000530893 NTMT1Q9BV86 223 aa16.92■□□□□ 0.3
BRCA2-204ENST00000530893 CLK4Q9HAZ1 481 aaKnown RBP16.92■□□□□ 0.3
BRCA2-204ENST00000530893 CD320Q9NPF0 282 aa16.92■□□□□ 0.3
BRCA2-204ENST00000530893 OLAHQ9NV23 265 aa16.92■□□□□ 0.3
BRCA2-204ENST00000530893 INTS7Q9NVH2 962 aaKnown RBP16.92■□□□□ 0.3
BRCA2-204ENST00000530893 SPG21Q9NZD8 308 aa16.92■□□□□ 0.3
BRCA2-204ENST00000530893 SLC8A2Q9UPR5 921 aa16.92■□□□□ 0.3
BRCA2-204ENST00000530893 CCL27Q9Y4X3 112 aa16.92■□□□□ 0.3
BRCA2-204ENST00000530893 ANGPTL3Q9Y5C1 460 aa16.92■□□□□ 0.3
BRCA2-204ENST00000530893 EME2A4GXA9 379 aaPredicted RBP16.92■□□□□ 0.3
BRCA2-204ENST00000530893 EIF3FO00303 357 aaPredicted RBP16.92■□□□□ 0.3
BRCA2-204ENST00000530893 SLC28A1O00337 649 aa16.92■□□□□ 0.3
BRCA2-204ENST00000530893 TRIM16O95361 564 aa16.92■□□□□ 0.3
BRCA2-204ENST00000530893 EBLN1P0CF75 366 aa16.92■□□□□ 0.3
BRCA2-204ENST00000530893 NSG1P42857 185 aa16.92■□□□□ 0.3
BRCA2-204ENST00000530893 PIK3CGP48736 1102 aa16.92■□□□□ 0.3
BRCA2-204ENST00000530893 HSPA7P48741 367 aa16.92■□□□□ 0.3
BRCA2-204ENST00000530893 CREMQ03060 361 aa16.92■□□□□ 0.3
BRCA2-204ENST00000530893 ABRAXAS2Q15018 415 aa16.92■□□□□ 0.3
BRCA2-204ENST00000530893 FUT11Q495W5 492 aa16.92■□□□□ 0.3
BRCA2-204ENST00000530893 DLEU7Q6UYE1 221 aa16.92■□□□□ 0.3
BRCA2-204ENST00000530893 B3GNT6Q6ZMB0 384 aa16.92■□□□□ 0.3
BRCA2-204ENST00000530893 EPHX4Q8IUS5 362 aa16.92■□□□□ 0.3
BRCA2-204ENST00000530893 NXPE1Q8N323 547 aa16.92■□□□□ 0.3
BRCA2-204ENST00000530893 GLB1L3Q8NCI6 653 aaPredicted RBP16.92■□□□□ 0.3
BRCA2-204ENST00000530893 OR2AP1Q8NGE2 309 aa16.92■□□□□ 0.3
BRCA2-204ENST00000530893 OR8J3Q8NGG0 315 aa16.92■□□□□ 0.3
BRCA2-204ENST00000530893 OSCP1Q8WVF1 389 aa16.92■□□□□ 0.3
BRCA2-204ENST00000530893 RHBDF1Q96CC6 855 aa16.92■□□□□ 0.3
BRCA2-204ENST00000530893 TOX2Q96NM4 488 aa16.92■□□□□ 0.3
BRCA2-204ENST00000530893 EGFL8Q99944 293 aa16.92■□□□□ 0.3
BRCA2-204ENST00000530893 C17orf80Q9BSJ5 609 aa16.92■□□□□ 0.3
BRCA2-204ENST00000530893 ACTL8Q9H568 366 aa16.92■□□□□ 0.3
BRCA2-204ENST00000530893 PAK6Q9NQU5 681 aaPredicted RBP16.92■□□□□ 0.3
BRCA2-204ENST00000530893 SLAMF8Q9P0V8 285 aa16.92■□□□□ 0.3
BRCA2-204ENST00000530893 TRPS1Q9UHF7 1281 aa16.92■□□□□ 0.3
BRCA2-204ENST00000530893 EIF3LQ9Y262 564 aaKnown RBP16.92■□□□□ 0.3
BRCA2-204ENST00000530893 SH3BP1Q9Y3L3 701 aa16.92■□□□□ 0.3
BRCA2-204ENST00000530893 RNF103-CHMP3A0A140T963 221 aa16.91■□□□□ 0.3
BRCA2-204ENST00000530893 SAC3D1A6NKF1 404 aa16.91■□□□□ 0.3
BRCA2-204ENST00000530893 K7EPI3 171 aa16.91■□□□□ 0.3
BRCA2-204ENST00000530893 SCAMP3O14828 347 aaKnown RBP16.91■□□□□ 0.3
BRCA2-204ENST00000530893 TULP3O75386 442 aa16.91■□□□□ 0.3
BRCA2-204ENST00000530893 ARHGEF15O94989 841 aa16.91■□□□□ 0.3
BRCA2-204ENST00000530893 MTHFD1P11586 935 aaKnown RBP16.91■□□□□ 0.3
BRCA2-204ENST00000530893 MYF6P23409 242 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms