RNA–Protein interactions for RNA: ENST00000530468.5

TM9SF1-209, Transcript of transmembrane 9 superfamily member 1, human

TSL 2

Gene TM9SF1, Length 1,065 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TM9SF1-209	ENST00000530468	RSPH14	Q9UHP6	348 aa		15.2	■□□□□ 0.02
TM9SF1-209	ENST00000530468	SLC24A2	Q9UI40	661 aa		15.2	■□□□□ 0.02
TM9SF1-209	ENST00000530468	VPS4A	Q9UN37	437 aa		15.2	■□□□□ 0.02
TM9SF1-209	ENST00000530468	FARSA	Q9Y285	508 aa	Known RBP	15.2	■□□□□ 0.02
TM9SF1-209	ENST00000530468	BTRC	Q9Y297	605 aa		15.2	■□□□□ 0.02
TM9SF1-209	ENST00000530468	HEBP2	Q9Y5Z4	205 aa		15.2	■□□□□ 0.02
TM9SF1-209	ENST00000530468	COLEC10	Q9Y6Z7	277 aa		15.2	■□□□□ 0.02
TM9SF1-209	ENST00000530468	hCG_1818297	A0A087WSY0	165 aa		15.19	■□□□□ 0.02
TM9SF1-209	ENST00000530468	OR6C74	A6NCV1	312 aa		15.19	■□□□□ 0.02
TM9SF1-209	ENST00000530468	C2orf81	A6NN90	581 aa		15.19	■□□□□ 0.02
TM9SF1-209	ENST00000530468	TTLL8	A6PVC2	850 aa		15.19	■□□□□ 0.02
TM9SF1-209	ENST00000530468		F5H423	210 aa	Predicted RBP	15.19	■□□□□ 0.02
TM9SF1-209	ENST00000530468	MATN2	O00339	956 aa		15.19	■□□□□ 0.02
TM9SF1-209	ENST00000530468	KLK3	P07288	261 aa	Predicted RBP	15.19	■□□□□ 0.02
TM9SF1-209	ENST00000530468	LPO	P22079	712 aa	Predicted RBP	15.19	■□□□□ 0.02
TM9SF1-209	ENST00000530468	GEM	P55040	296 aa		15.19	■□□□□ 0.02
TM9SF1-209	ENST00000530468	RPS18	P62269	152 aa	Known RBP	15.19	■□□□□ 0.02
TM9SF1-209	ENST00000530468	PRKAA1	Q13131	559 aa		15.19	■□□□□ 0.02
TM9SF1-209	ENST00000530468	LAMB3	Q13751	1172 aa		15.19	■□□□□ 0.02
TM9SF1-209	ENST00000530468	TAF1A	Q15573	450 aa	Predicted RBP	15.19	■□□□□ 0.02
TM9SF1-209	ENST00000530468	BCL7A	Q4VC05	210 aa		15.19	■□□□□ 0.02
TM9SF1-209	ENST00000530468	IZUMO3	Q5VZ72	239 aa		15.19	■□□□□ 0.02
TM9SF1-209	ENST00000530468	DET1	Q7L5Y6	550 aa		15.19	■□□□□ 0.02
TM9SF1-209	ENST00000530468	MR1	Q95460	341 aa		15.19	■□□□□ 0.02
TM9SF1-209	ENST00000530468	ZNF501	Q96CX3	271 aa	Predicted RBP	15.19	■□□□□ 0.02
TM9SF1-209	ENST00000530468	ACSS2	Q9NR19	701 aa		15.19	■□□□□ 0.02
TM9SF1-209	ENST00000530468	SOHLH2	Q9NX45	425 aa		15.19	■□□□□ 0.02
TM9SF1-209	ENST00000530468	COL12A1	Q99715	3063 aa		15.18	■□□□□ 0.02
TM9SF1-209	ENST00000530468	ANXA9	O76027	345 aa		15.18	■□□□□ 0.02
TM9SF1-209	ENST00000530468	SRP72	O76094	671 aa	Known RBP	15.18	■□□□□ 0.02
TM9SF1-209	ENST00000530468	ZRANB2	O95218	330 aa	Known RBP eCLIP	15.18	■□□□□ 0.02
TM9SF1-209	ENST00000530468	RAB40AL	P0C0E4	278 aa		15.18	■□□□□ 0.02
TM9SF1-209	ENST00000530468	RALB	P11234	206 aa		15.18	■□□□□ 0.02
TM9SF1-209	ENST00000530468	HADHB	P55084	474 aa	Known RBP	15.18	■□□□□ 0.02
TM9SF1-209	ENST00000530468	ADCY2	Q08462	1091 aa		15.18	■□□□□ 0.02
TM9SF1-209	ENST00000530468	GPS2	Q13227	327 aa		15.18	■□□□□ 0.02
TM9SF1-209	ENST00000530468	IL10RA	Q13651	578 aa		15.18	■□□□□ 0.02
TM9SF1-209	ENST00000530468	GSE1	Q14687	1217 aa		15.18	■□□□□ 0.02
TM9SF1-209	ENST00000530468	LLGL1	Q15334	1064 aa		15.18	■□□□□ 0.02
TM9SF1-209	ENST00000530468	GPR19	Q15760	415 aa		15.18	■□□□□ 0.02
TM9SF1-209	ENST00000530468	PAPD7	Q5XG87	772 aa	Known RBP	15.18	■□□□□ 0.02
TM9SF1-209	ENST00000530468	ITPRIPL1	Q6GPH6	555 aa		15.18	■□□□□ 0.02
TM9SF1-209	ENST00000530468	DUS1L	Q6P1R4	473 aa	Known RBP	15.18	■□□□□ 0.02
TM9SF1-209	ENST00000530468	VSTM4	Q8IW00	320 aa		15.18	■□□□□ 0.02
TM9SF1-209	ENST00000530468	KATNAL2	Q8IYT4	538 aa		15.18	■□□□□ 0.02
TM9SF1-209	ENST00000530468	RCOR2	Q8IZ40	523 aa		15.18	■□□□□ 0.02
TM9SF1-209	ENST00000530468	GALNT11	Q8NCW6	608 aa		15.18	■□□□□ 0.02
TM9SF1-209	ENST00000530468	HM13	Q8TCT9	377 aa		15.18	■□□□□ 0.02
TM9SF1-209	ENST00000530468	CPT1B	Q92523	772 aa		15.18	■□□□□ 0.02
TM9SF1-209	ENST00000530468	RBM41	Q96IZ5	413 aa	Known RBP	15.18	■□□□□ 0.02
TM9SF1-209	ENST00000530468	FERMT1	Q9BQL6	677 aa		15.18	■□□□□ 0.02
TM9SF1-209	ENST00000530468	CCM2	Q9BSQ5	444 aa		15.18	■□□□□ 0.02
TM9SF1-209	ENST00000530468	ING2	Q9H160	280 aa		15.18	■□□□□ 0.02
TM9SF1-209	ENST00000530468	GBA3	Q9H227	469 aa		15.18	■□□□□ 0.02
TM9SF1-209	ENST00000530468	ASB8	Q9H765	288 aa		15.18	■□□□□ 0.02
TM9SF1-209	ENST00000530468	SYTL2	Q9HCH5	934 aa		15.18	■□□□□ 0.02
TM9SF1-209	ENST00000530468	LRRC4C	Q9HCJ2	640 aa		15.18	■□□□□ 0.02
TM9SF1-209	ENST00000530468	MLXIPL	Q9NP71	852 aa		15.18	■□□□□ 0.02
TM9SF1-209	ENST00000530468	PCDHGB7	Q9Y5F8	929 aa		15.18	■□□□□ 0.02
TM9SF1-209	ENST00000530468	ALG6	Q9Y672	507 aa		15.18	■□□□□ 0.02
TM9SF1-209	ENST00000530468	ARL5A	Q9Y689	179 aa		15.18	■□□□□ 0.02
TM9SF1-209	ENST00000530468	RELN	P78509	3460 aa		15.18	■□□□□ 0.02
TM9SF1-209	ENST00000530468	BLACE	A4D250	179 aa		15.17	■□□□□ 0.02
TM9SF1-209	ENST00000530468	C5orf60	A6NFR6	353 aa		15.17	■□□□□ 0.02
TM9SF1-209	ENST00000530468	ARGFX	A6NJG6	315 aa		15.17	■□□□□ 0.02
TM9SF1-209	ENST00000530468	KPNA2	P52292	529 aa	Known RBP	15.17	■□□□□ 0.02
TM9SF1-209	ENST00000530468	KRT33B	Q14525	404 aa		15.17	■□□□□ 0.02
TM9SF1-209	ENST00000530468	CPZ	Q66K79	652 aa		15.17	■□□□□ 0.02
TM9SF1-209	ENST00000530468	CAPRIN2	Q6IMN6	1127 aa	Known RBP	15.17	■□□□□ 0.02
TM9SF1-209	ENST00000530468	CNGA4	Q8IV77	575 aa		15.17	■□□□□ 0.02
TM9SF1-209	ENST00000530468	CCDC50	Q8IVM0	306 aa		15.17	■□□□□ 0.02
TM9SF1-209	ENST00000530468	DSEL	Q8IZU8	1212 aa		15.17	■□□□□ 0.02
TM9SF1-209	ENST00000530468	SPDYE1	Q8NFV5	336 aa	Predicted RBP	15.17	■□□□□ 0.02
TM9SF1-209	ENST00000530468	OR4K2	Q8NGD2	314 aa		15.17	■□□□□ 0.02
TM9SF1-209	ENST00000530468	CPT1C	Q8TCG5	803 aa		15.17	■□□□□ 0.02
TM9SF1-209	ENST00000530468	HEXDC	Q8WVB3	486 aa		15.17	■□□□□ 0.02
TM9SF1-209	ENST00000530468	ULK4	Q96C45	1275 aa		15.17	■□□□□ 0.02
TM9SF1-209	ENST00000530468	HAUS1	Q96CS2	278 aa		15.17	■□□□□ 0.02
TM9SF1-209	ENST00000530468	DCUN1D1	Q96GG9	259 aa		15.17	■□□□□ 0.02
TM9SF1-209	ENST00000530468	RMDN2	Q96LZ7	410 aa		15.17	■□□□□ 0.02
TM9SF1-209	ENST00000530468	C19orf43	Q9BQ61	176 aa		15.17	■□□□□ 0.02
TM9SF1-209	ENST00000530468	FICD	Q9BVA6	458 aa		15.17	■□□□□ 0.02
TM9SF1-209	ENST00000530468	CHST8	Q9H2A9	424 aa		15.17	■□□□□ 0.02
TM9SF1-209	ENST00000530468	C1GALT1	Q9NS00	363 aa		15.17	■□□□□ 0.02
TM9SF1-209	ENST00000530468	FAM8A1	Q9UBU6	413 aa		15.17	■□□□□ 0.02
TM9SF1-209	ENST00000530468	POMT2	Q9UKY4	750 aa		15.17	■□□□□ 0.02
TM9SF1-209	ENST00000530468	G3BP2	Q9UN86	482 aa	Known RBP	15.17	■□□□□ 0.02
TM9SF1-209	ENST00000530468	SBDS	Q9Y3A5	250 aa	Known RBP eCLIP	15.17	■□□□□ 0.02
TM9SF1-209	ENST00000530468	NBAS	A2RRP1	2371 aa		15.16	■□□□□ 0.02
TM9SF1-209	ENST00000530468	AGAP14	A8MT82	685 aa		15.16	■□□□□ 0.02
TM9SF1-209	ENST00000530468	APOC4-APOC2	K7ER74	178 aa		15.16	■□□□□ 0.02
TM9SF1-209	ENST00000530468	MEN1	O00255	615 aa		15.16	■□□□□ 0.02
TM9SF1-209	ENST00000530468	AGT	P01019	485 aa		15.16	■□□□□ 0.02
TM9SF1-209	ENST00000530468	APOC2	P02655	101 aa		15.16	■□□□□ 0.02
TM9SF1-209	ENST00000530468	MSL3P1	P0C860	447 aa		15.16	■□□□□ 0.02
TM9SF1-209	ENST00000530468	POLR2C	P19387	275 aa	Predicted RBP	15.16	■□□□□ 0.02
TM9SF1-209	ENST00000530468	CDH3	P22223	829 aa		15.16	■□□□□ 0.02
TM9SF1-209	ENST00000530468	PRLHR	P49683	370 aa		15.16	■□□□□ 0.02
TM9SF1-209	ENST00000530468	CCL11	P51671	97 aa		15.16	■□□□□ 0.02
TM9SF1-209	ENST00000530468	CHAF1B	Q13112	559 aa		15.16	■□□□□ 0.02

Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms