RNA–Protein interactions for RNA: ENST00000529986.5

CTNND1-223, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,727 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-223ENST00000529986 UNC5BQ8IZJ1 945 aa7.54□□□□□ -1.2
CTNND1-223ENST00000529986 SLC37A3Q8NCC5 494 aa7.54□□□□□ -1.2
CTNND1-223ENST00000529986 ARRDC4Q8NCT1 418 aa7.54□□□□□ -1.2
CTNND1-223ENST00000529986 SDCBP2Q9H190 292 aa7.54□□□□□ -1.2
CTNND1-223ENST00000529986 OR51V1Q9H2C8 321 aa7.54□□□□□ -1.2
CTNND1-223ENST00000529986 CHMP1AQ9HD42 196 aaPredicted RBP7.54□□□□□ -1.2
CTNND1-223ENST00000529986 AGO1Q9UL18 857 aaKnown RBP7.54□□□□□ -1.2
CTNND1-223ENST00000529986 SLC27A5Q9Y2P5 690 aa7.54□□□□□ -1.2
CTNND1-223ENST00000529986 TMEM233B4DJY2 109 aa7.54□□□□□ -1.2
CTNND1-223ENST00000529986 MCIDASD6RGH6 385 aa7.54□□□□□ -1.2
CTNND1-223ENST00000529986 SERPINA3P01011 423 aa7.54□□□□□ -1.2
CTNND1-223ENST00000529986 ACADMP11310 421 aa7.54□□□□□ -1.2
CTNND1-223ENST00000529986 COL6A2P12110 1019 aa7.54□□□□□ -1.2
CTNND1-223ENST00000529986 POLR2EP19388 210 aaKnown RBP7.54□□□□□ -1.2
CTNND1-223ENST00000529986 ATP5C1P36542 298 aaKnown RBP7.54□□□□□ -1.2
CTNND1-223ENST00000529986 RPS3AP61247 264 aaKnown RBP7.54□□□□□ -1.2
CTNND1-223ENST00000529986 BTBD16Q32M84 506 aa7.54□□□□□ -1.2
CTNND1-223ENST00000529986 FAM83AQ86UY5 434 aa7.54□□□□□ -1.2
CTNND1-223ENST00000529986 SPAG16Q8N0X2 631 aa7.54□□□□□ -1.2
CTNND1-223ENST00000529986 AKT1S1Q96B36 256 aa7.54□□□□□ -1.2
CTNND1-223ENST00000529986 NSMCE3Q96MG7 304 aa7.54□□□□□ -1.2
CTNND1-223ENST00000529986 IL4I1Q96RQ9 567 aa7.54□□□□□ -1.2
CTNND1-223ENST00000529986 TAS2R7Q9NYW3 318 aa7.54□□□□□ -1.2
CTNND1-223ENST00000529986 DNAJB9Q9UBS3 223 aa7.54□□□□□ -1.2
CTNND1-223ENST00000529986 FBXO9Q9UK97 447 aaPredicted RBP7.54□□□□□ -1.2
CTNND1-223ENST00000529986 PHF24Q9UPV7 400 aa7.54□□□□□ -1.2
CTNND1-223ENST00000529986 TCRBV7S3A2A0A539 114 aa7.53□□□□□ -1.2
CTNND1-223ENST00000529986 MAGEB3O15480 346 aa7.53□□□□□ -1.2
CTNND1-223ENST00000529986 APOL3O95236 402 aa7.53□□□□□ -1.2
CTNND1-223ENST00000529986 MT-CYBP00156 380 aaPredicted RBP7.53□□□□□ -1.2
CTNND1-223ENST00000529986 CXCR2P25025 360 aa7.53□□□□□ -1.2
CTNND1-223ENST00000529986 GPR1P46091 355 aa7.53□□□□□ -1.2
CTNND1-223ENST00000529986 BMT2Q1RMZ1 405 aa7.53□□□□□ -1.2
CTNND1-223ENST00000529986 PLEKHH3Q7Z736 793 aa7.53□□□□□ -1.2
CTNND1-223ENST00000529986 SLC51AQ86UW1 340 aa7.53□□□□□ -1.2
CTNND1-223ENST00000529986 ZNF410Q86VK4 478 aa7.53□□□□□ -1.2
CTNND1-223ENST00000529986 NT5DC4Q86YG4 428 aa7.53□□□□□ -1.2
CTNND1-223ENST00000529986 ZNF567Q8N184 647 aa7.53□□□□□ -1.2
CTNND1-223ENST00000529986 ZNF431Q8TF32 576 aaPredicted RBP7.53□□□□□ -1.2
CTNND1-223ENST00000529986 UFD1Q92890 307 aa7.53□□□□□ -1.2
CTNND1-223ENST00000529986 LPPQ93052 612 aa7.53□□□□□ -1.2
CTNND1-223ENST00000529986 FATE1Q969F0 183 aa7.53□□□□□ -1.2
CTNND1-223ENST00000529986 TMBIM1Q969X1 311 aa7.53□□□□□ -1.2
CTNND1-223ENST00000529986 EXOSC8Q96B26 276 aaKnown RBP7.53□□□□□ -1.2
CTNND1-223ENST00000529986 CCSER2Q9H7U1 834 aa7.53□□□□□ -1.2
CTNND1-223ENST00000529986 ZNF69Q9UC07 566 aa7.53□□□□□ -1.2
CTNND1-223ENST00000529986 A0A088AWK7 358 aa7.53□□□□□ -1.2
CTNND1-223ENST00000529986 FFAR2O15552 330 aa7.53□□□□□ -1.2
CTNND1-223ENST00000529986 PAGE1O75459 146 aa7.53□□□□□ -1.2
CTNND1-223ENST00000529986 TMEM63AO94886 807 aa7.53□□□□□ -1.2
CTNND1-223ENST00000529986 CST3P01034 146 aaPredicted RBP7.53□□□□□ -1.2
CTNND1-223ENST00000529986 PKMP14618 531 aaKnown RBP7.53□□□□□ -1.2
CTNND1-223ENST00000529986 ZNF10P21506 573 aaPredicted RBP7.53□□□□□ -1.2
CTNND1-223ENST00000529986 CES1P23141 567 aa7.53□□□□□ -1.2
CTNND1-223ENST00000529986 CDH5P33151 784 aaPredicted RBP7.53□□□□□ -1.2
CTNND1-223ENST00000529986 NKX2-5P52952 324 aaPredicted RBP7.53□□□□□ -1.2
CTNND1-223ENST00000529986 JAM2P57087 298 aa7.53□□□□□ -1.2
CTNND1-223ENST00000529986 AP3S2P59780 193 aa7.53□□□□□ -1.2
CTNND1-223ENST00000529986 LCP2Q13094 533 aa7.53□□□□□ -1.2
CTNND1-223ENST00000529986 MEP1AQ16819 746 aa7.53□□□□□ -1.2
CTNND1-223ENST00000529986 ZNF829Q3KNS6 432 aaPredicted RBP7.53□□□□□ -1.2
CTNND1-223ENST00000529986 OGFRL1Q5TC84 451 aaPredicted RBP7.53□□□□□ -1.2
CTNND1-223ENST00000529986 CHST15Q7LFX5 561 aaPredicted RBP7.53□□□□□ -1.2
CTNND1-223ENST00000529986 PHTF2Q8N3S3 785 aa7.53□□□□□ -1.2
CTNND1-223ENST00000529986 SYNPOQ8N3V7 929 aa7.53□□□□□ -1.2
CTNND1-223ENST00000529986 C12orf50Q8NA57 414 aaPredicted RBP7.53□□□□□ -1.2
CTNND1-223ENST00000529986 OR5K1Q8NHB7 308 aa7.53□□□□□ -1.2
CTNND1-223ENST00000529986 SLC9A6Q92581 669 aa7.53□□□□□ -1.2
CTNND1-223ENST00000529986 MSANTD3Q96H12 275 aa7.53□□□□□ -1.2
CTNND1-223ENST00000529986 MFSD14AQ96MC6 490 aa7.53□□□□□ -1.2
CTNND1-223ENST00000529986 RIMKLBQ9ULI2 386 aa7.53□□□□□ -1.2
CTNND1-223ENST00000529986 ASF1AQ9Y294 204 aa7.53□□□□□ -1.2
CTNND1-223ENST00000529986 YARS2Q9Y2Z4 477 aaKnown RBP7.53□□□□□ -1.2
CTNND1-223ENST00000529986 LRRC42Q9Y546 428 aa7.53□□□□□ -1.2
CTNND1-223ENST00000529986 SNX10Q9Y5X0 201 aa7.53□□□□□ -1.2
CTNND1-223ENST00000529986 FKBP7Q9Y680 259 aa7.53□□□□□ -1.2
CTNND1-223ENST00000529986 LMO7Q8WWI1 1683 aa7.53□□□□□ -1.2
CTNND1-223ENST00000529986 C5orf51A6NDU8 294 aa7.53□□□□□ -1.2
CTNND1-223ENST00000529986 NME6O75414 186 aaPredicted RBP7.53□□□□□ -1.2
CTNND1-223ENST00000529986 FGF1P05230 155 aa7.53□□□□□ -1.2
CTNND1-223ENST00000529986 GNAO1P09471 354 aa7.53□□□□□ -1.2
CTNND1-223ENST00000529986 ANXA4P09525 319 aaPredicted RBP7.53□□□□□ -1.2
CTNND1-223ENST00000529986 UBA1P22314 1058 aaKnown RBP7.53□□□□□ -1.2
CTNND1-223ENST00000529986 CPN2P22792 545 aa7.53□□□□□ -1.2
CTNND1-223ENST00000529986 ADCYAP1R1P41586 468 aa7.53□□□□□ -1.2
CTNND1-223ENST00000529986 GRIK5Q16478 980 aa7.53□□□□□ -1.2
CTNND1-223ENST00000529986 PLA2G4EQ3MJ16 856 aa7.53□□□□□ -1.2
CTNND1-223ENST00000529986 C4orf46Q504U0 113 aa7.53□□□□□ -1.2
CTNND1-223ENST00000529986 MPPE1Q53F39 396 aa7.53□□□□□ -1.2
CTNND1-223ENST00000529986 FAM91A1Q658Y4 838 aa7.53□□□□□ -1.2
CTNND1-223ENST00000529986 PTF1AQ7RTS3 328 aa7.53□□□□□ -1.2
CTNND1-223ENST00000529986 COQ3Q9NZJ6 369 aa7.53□□□□□ -1.2
CTNND1-223ENST00000529986 TBC1D14Q9P2M4 693 aa7.53□□□□□ -1.2
CTNND1-223ENST00000529986 MAN2B2Q9Y2E5 1009 aa7.53□□□□□ -1.2
CTNND1-223ENST00000529986 ZNF780BQ9Y6R6 833 aa7.53□□□□□ -1.2
CTNND1-223ENST00000529986 SLC35F4A4IF30 521 aa7.53□□□□□ -1.2
CTNND1-223ENST00000529986 TCAF2A6NFQ2 919 aa7.53□□□□□ -1.2
CTNND1-223ENST00000529986 ARPC2O15144 300 aa7.53□□□□□ -1.2
CTNND1-223ENST00000529986 RPP40O75818 363 aaKnown RBP7.53□□□□□ -1.2
CTNND1-223ENST00000529986 GADD45GO95257 159 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms