RNA–Protein interactions for RNA: ENST00000529963.1

AMBRA1-209, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best)

Gene AMBRA1, Length 1,529 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-209ENST00000529963 TRIM36Q9NQ86 728 aa5.25□□□□□ -1.57
AMBRA1-209ENST00000529963 AGPAT3Q9NRZ7 376 aa5.25□□□□□ -1.57
AMBRA1-209ENST00000529963 PDP2Q9P2J9 529 aa5.25□□□□□ -1.57
AMBRA1-209ENST00000529963 THADAQ6YHU6 1953 aa5.25□□□□□ -1.57
AMBRA1-209ENST00000529963 GON4LQ3T8J9 2241 aa5.25□□□□□ -1.57
AMBRA1-209ENST00000529963 SMG1Q96Q15 3661 aaKnown RBP5.24□□□□□ -1.57
AMBRA1-209ENST00000529963 ANAPC1Q9H1A4 1944 aa5.24□□□□□ -1.57
AMBRA1-209ENST00000529963 TARM1B6A8C7 271 aa5.24□□□□□ -1.57
AMBRA1-209ENST00000529963 SYT5O00445 386 aa5.24□□□□□ -1.57
AMBRA1-209ENST00000529963 CLDN5O00501 218 aa5.24□□□□□ -1.57
AMBRA1-209ENST00000529963 HOXC11O43248 304 aaPredicted RBP5.24□□□□□ -1.57
AMBRA1-209ENST00000529963 DHHO43323 396 aa5.24□□□□□ -1.57
AMBRA1-209ENST00000529963 COCHO43405 550 aa5.24□□□□□ -1.57
AMBRA1-209ENST00000529963 TMPRSS11DO60235 418 aa5.24□□□□□ -1.57
AMBRA1-209ENST00000529963 TULP3O75386 442 aa5.24□□□□□ -1.57
AMBRA1-209ENST00000529963 ANXA6P08133 673 aa5.24□□□□□ -1.57
AMBRA1-209ENST00000529963 HOXB2P14652 356 aa5.24□□□□□ -1.57
AMBRA1-209ENST00000529963 TRIM21P19474 475 aaKnown RBP5.24□□□□□ -1.57
AMBRA1-209ENST00000529963 SYT1P21579 422 aa5.24□□□□□ -1.57
AMBRA1-209ENST00000529963 ADRA1DP25100 572 aa5.24□□□□□ -1.57
AMBRA1-209ENST00000529963 PTGER3P43115 390 aa5.24□□□□□ -1.57
AMBRA1-209ENST00000529963 TUBP50607 506 aa5.24□□□□□ -1.57
AMBRA1-209ENST00000529963 CYP2J2P51589 502 aa5.24□□□□□ -1.57
AMBRA1-209ENST00000529963 ALDH18A1P54886 795 aaKnown RBP5.24□□□□□ -1.57
AMBRA1-209ENST00000529963 GFPT1Q06210 699 aaPredicted RBP5.24□□□□□ -1.57
AMBRA1-209ENST00000529963 GOLGA8FQ08AF8 430 aa5.24□□□□□ -1.57
AMBRA1-209ENST00000529963 GOLGA8DPQ0D2H9 430 aa5.24□□□□□ -1.57
AMBRA1-209ENST00000529963 PTK2BQ14289 1009 aa5.24□□□□□ -1.57
AMBRA1-209ENST00000529963 STK38Q15208 465 aa5.24□□□□□ -1.57
AMBRA1-209ENST00000529963 DUOXA1Q1HG43 343 aa5.24□□□□□ -1.57
AMBRA1-209ENST00000529963 C10orf76Q5T2E6 689 aa5.24□□□□□ -1.57
AMBRA1-209ENST00000529963 LIN54Q6MZP7 749 aa5.24□□□□□ -1.57
AMBRA1-209ENST00000529963 FAM173BQ6P4H8 233 aa5.24□□□□□ -1.57
AMBRA1-209ENST00000529963 C19orf48Q6RUI8 117 aa5.24□□□□□ -1.57
AMBRA1-209ENST00000529963 BCDIN3DQ7Z5W3 292 aaKnown RBP5.24□□□□□ -1.57
AMBRA1-209ENST00000529963 SFTPA1Q8IWL2 248 aa5.24□□□□□ -1.57
AMBRA1-209ENST00000529963 IQUBQ8NA54 791 aa5.24□□□□□ -1.57
AMBRA1-209ENST00000529963 XXYLT1Q8NBI6 393 aa5.24□□□□□ -1.57
AMBRA1-209ENST00000529963 SARAFQ96BY9 339 aa5.24□□□□□ -1.57
AMBRA1-209ENST00000529963 SMARCD1Q96GM5 515 aa5.24□□□□□ -1.57
AMBRA1-209ENST00000529963 UBXN10Q96LJ8 280 aa5.24□□□□□ -1.57
AMBRA1-209ENST00000529963 USP28Q96RU2 1077 aa5.24□□□□□ -1.57
AMBRA1-209ENST00000529963 GTPBP2Q9BX10 602 aaKnown RBP5.24□□□□□ -1.57
AMBRA1-209ENST00000529963 SORBS1Q9BX66 1292 aaKnown RBP5.24□□□□□ -1.57
AMBRA1-209ENST00000529963 DPEP3Q9H4B8 488 aa5.24□□□□□ -1.57
AMBRA1-209ENST00000529963 MAGEF1Q9HAY2 307 aa5.24□□□□□ -1.57
AMBRA1-209ENST00000529963 DMAP1Q9NPF5 467 aaPredicted RBP5.24□□□□□ -1.57
AMBRA1-209ENST00000529963 SNX15Q9NRS6 342 aa5.24□□□□□ -1.57
AMBRA1-209ENST00000529963 COMMD8Q9NX08 183 aa5.24□□□□□ -1.57
AMBRA1-209ENST00000529963 ASIC5Q9NY37 505 aa5.24□□□□□ -1.57
AMBRA1-209ENST00000529963 CGNQ9P2M7 1197 aaKnown RBP5.24□□□□□ -1.57
AMBRA1-209ENST00000529963 DEC1Q9P2X7 70 aa5.24□□□□□ -1.57
AMBRA1-209ENST00000529963 CACNA1EQ15878 2313 aa5.24□□□□□ -1.57
AMBRA1-209ENST00000529963 KIAA1549LQ6ZVL6 1849 aa5.24□□□□□ -1.57
AMBRA1-209ENST00000529963 HELZP42694 1942 aaKnown RBP5.24□□□□□ -1.57
AMBRA1-209ENST00000529963 HECTD1Q9ULT8 2610 aa5.24□□□□□ -1.57
AMBRA1-209ENST00000529963 NUP205Q92621 2012 aa5.24□□□□□ -1.57
AMBRA1-209ENST00000529963 ATXN2Q99700 1313 aaKnown RBP5.24□□□□□ -1.57
AMBRA1-209ENST00000529963 NBEAQ8NFP9 2946 aa5.24□□□□□ -1.57
AMBRA1-209ENST00000529963 ASCC3Q8N3C0 2202 aaKnown RBP5.24□□□□□ -1.57
AMBRA1-209ENST00000529963 MYO16Q9Y6X6 1858 aa5.24□□□□□ -1.57
AMBRA1-209ENST00000529963 ANTXRLA6NF34 631 aa5.23□□□□□ -1.57
AMBRA1-209ENST00000529963 H0Y626 953 aa5.23□□□□□ -1.57
AMBRA1-209ENST00000529963 CLIC2O15247 247 aa5.23□□□□□ -1.57
AMBRA1-209ENST00000529963 SPTLC2O15270 562 aa5.23□□□□□ -1.57
AMBRA1-209ENST00000529963 TGFB1I1O43294 461 aa5.23□□□□□ -1.57
AMBRA1-209ENST00000529963 ZNF217O75362 1048 aa5.23□□□□□ -1.57
AMBRA1-209ENST00000529963 TRIM16O95361 564 aa5.23□□□□□ -1.57
AMBRA1-209ENST00000529963 CER1O95813 267 aa5.23□□□□□ -1.57
AMBRA1-209ENST00000529963 SERPINF2P08697 491 aa5.23□□□□□ -1.57
AMBRA1-209ENST00000529963 IRF1P10914 325 aa5.23□□□□□ -1.57
AMBRA1-209ENST00000529963 P4HA1P13674 534 aa5.23□□□□□ -1.57
AMBRA1-209ENST00000529963 APEHP13798 732 aaKnown RBP5.23□□□□□ -1.57
AMBRA1-209ENST00000529963 WT1P19544 449 aaPredicted RBP5.23□□□□□ -1.57
AMBRA1-209ENST00000529963 HOXD13P35453 343 aa5.23□□□□□ -1.57
AMBRA1-209ENST00000529963 SERPINF1P36955 418 aa5.23□□□□□ -1.57
AMBRA1-209ENST00000529963 GSTM5P46439 218 aa5.23□□□□□ -1.57
AMBRA1-209ENST00000529963 AP3M2P53677 418 aa5.23□□□□□ -1.57
AMBRA1-209ENST00000529963 MYL6P60660 151 aa5.23□□□□□ -1.57
AMBRA1-209ENST00000529963 HOXA4Q00056 320 aaPredicted RBP5.23□□□□□ -1.57
AMBRA1-209ENST00000529963 HNRNPDQ14103 355 aaKnown RBP5.23□□□□□ -1.57
AMBRA1-209ENST00000529963 COL28A1Q2UY09 1125 aa5.23□□□□□ -1.57
AMBRA1-209ENST00000529963 ZNF699Q32M78 642 aa5.23□□□□□ -1.57
AMBRA1-209ENST00000529963 BTBD16Q32M84 506 aa5.23□□□□□ -1.57
AMBRA1-209ENST00000529963 ZNF667Q5HYK9 610 aa5.23□□□□□ -1.57
AMBRA1-209ENST00000529963 INTS11Q5TA45 600 aaKnown RBP5.23□□□□□ -1.57
AMBRA1-209ENST00000529963 SNX30Q5VWJ9 437 aa5.23□□□□□ -1.57
AMBRA1-209ENST00000529963 MSANTD2Q6P1R3 559 aa5.23□□□□□ -1.57
AMBRA1-209ENST00000529963 SERPINA13PQ6UXR4 307 aa5.23□□□□□ -1.57
AMBRA1-209ENST00000529963 TRIM72Q6ZMU5 477 aa5.23□□□□□ -1.57
AMBRA1-209ENST00000529963 MAATS1Q7Z4T9 603 aa5.23□□□□□ -1.57
AMBRA1-209ENST00000529963 GATAD2AQ86YP4 633 aa5.23□□□□□ -1.57
AMBRA1-209ENST00000529963 NELFCDQ8IXH7 590 aa5.23□□□□□ -1.57
AMBRA1-209ENST00000529963 C12orf56Q8IXR9 622 aa5.23□□□□□ -1.57
AMBRA1-209ENST00000529963 GALNT15Q8N3T1 639 aa5.23□□□□□ -1.57
AMBRA1-209ENST00000529963 FRMD1Q8N878 549 aa5.23□□□□□ -1.57
AMBRA1-209ENST00000529963 FAM71DQ8N9W8 422 aa5.23□□□□□ -1.57
AMBRA1-209ENST00000529963 LINC00301Q8NCQ3 95 aa5.23□□□□□ -1.57
AMBRA1-209ENST00000529963 SCAMP5Q8TAC9 235 aa5.23□□□□□ -1.57
AMBRA1-209ENST00000529963 GOLGA5Q8TBA6 731 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms