RNA–Protein interactions for RNA: ENST00000528930.5

SSBP3-212, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best)

Gene SSBP3, Length 862 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-212ENST00000528930 ZNF711Q9Y462 761 aa8.35□□□□□ -1.07
SSBP3-212ENST00000528930 PLEKHM1Q9Y4G2 1056 aa8.35□□□□□ -1.07
SSBP3-212ENST00000528930 SCO2A0A1W2PP80 73 aa8.34□□□□□ -1.07
SSBP3-212ENST00000528930 TCRBV7S2A1N4TA0A589 114 aa8.34□□□□□ -1.07
SSBP3-212ENST00000528930 FAM221AA4D161 298 aa8.34□□□□□ -1.07
SSBP3-212ENST00000528930 D6RAR5 112 aa8.34□□□□□ -1.07
SSBP3-212ENST00000528930 STMND1H3BQB6 276 aa8.34□□□□□ -1.07
SSBP3-212ENST00000528930 INPP4BO15327 924 aa8.34□□□□□ -1.07
SSBP3-212ENST00000528930 KCNN4O15554 427 aa8.34□□□□□ -1.07
SSBP3-212ENST00000528930 KRT86O43790 486 aa8.34□□□□□ -1.07
SSBP3-212ENST00000528930 DNAJC6O75061 913 aa8.34□□□□□ -1.07
SSBP3-212ENST00000528930 TUBB4AP04350 444 aa8.34□□□□□ -1.07
SSBP3-212ENST00000528930 FGF1P05230 155 aa8.34□□□□□ -1.07
SSBP3-212ENST00000528930 CD99P14209 185 aa8.34□□□□□ -1.07
SSBP3-212ENST00000528930 BPIP17213 487 aa8.34□□□□□ -1.07
SSBP3-212ENST00000528930 AK4P27144 223 aaPredicted RBP8.34□□□□□ -1.07
SSBP3-212ENST00000528930 OAS2P29728 719 aaKnown RBP8.34□□□□□ -1.07
SSBP3-212ENST00000528930 ADRA1AP35348 466 aa8.34□□□□□ -1.07
SSBP3-212ENST00000528930 HMGCLP35914 325 aa8.34□□□□□ -1.07
SSBP3-212ENST00000528930 ADCY8P40145 1251 aa8.34□□□□□ -1.07
SSBP3-212ENST00000528930 CETN2P41208 172 aa8.34□□□□□ -1.07
SSBP3-212ENST00000528930 ATP1A2P50993 1020 aa8.34□□□□□ -1.07
SSBP3-212ENST00000528930 DCDC1P59894 354 aa8.34□□□□□ -1.07
SSBP3-212ENST00000528930 CCZ1BP86790 482 aa8.34□□□□□ -1.07
SSBP3-212ENST00000528930 CCZ1P86791 482 aaPredicted RBP8.34□□□□□ -1.07
SSBP3-212ENST00000528930 MSLNQ13421 630 aaPredicted RBP8.34□□□□□ -1.07
SSBP3-212ENST00000528930 OLIG2Q13516 323 aa8.34□□□□□ -1.07
SSBP3-212ENST00000528930 HLTFQ14527 1009 aaKnown RBP eCLIP8.34□□□□□ -1.07
SSBP3-212ENST00000528930 SLC1A5Q15758 541 aa8.34□□□□□ -1.07
SSBP3-212ENST00000528930 PYCR3Q53H96 274 aa8.34□□□□□ -1.07
SSBP3-212ENST00000528930 DARS2Q6PI48 645 aaKnown RBP8.34□□□□□ -1.07
SSBP3-212ENST00000528930 DOK6Q6PKX4 331 aa8.34□□□□□ -1.07
SSBP3-212ENST00000528930 ZNF662Q6ZS27 426 aa8.34□□□□□ -1.07
SSBP3-212ENST00000528930 CDH24Q86UP0 819 aa8.34□□□□□ -1.07
SSBP3-212ENST00000528930 C17orf82Q86X59 251 aaPredicted RBP8.34□□□□□ -1.07
SSBP3-212ENST00000528930 KRTAP1-3Q8IUG1 177 aa8.34□□□□□ -1.07
SSBP3-212ENST00000528930 CDKL3Q8IVW4 592 aaPredicted RBP8.34□□□□□ -1.07
SSBP3-212ENST00000528930 KLHDC8BQ8IXV7 354 aa8.34□□□□□ -1.07
SSBP3-212ENST00000528930 TTC30BQ8N4P2 665 aa8.34□□□□□ -1.07
SSBP3-212ENST00000528930 SLC25A41Q8N5S1 370 aa8.34□□□□□ -1.07
SSBP3-212ENST00000528930 TRAM1L1Q8N609 369 aa8.34□□□□□ -1.07
SSBP3-212ENST00000528930 CCDC112Q8NEF3 446 aa8.34□□□□□ -1.07
SSBP3-212ENST00000528930 FAM46DQ8NEK8 389 aa8.34□□□□□ -1.07
SSBP3-212ENST00000528930 IPMKQ8NFU5 416 aa8.34□□□□□ -1.07
SSBP3-212ENST00000528930 USP7Q93009 1102 aa8.34□□□□□ -1.07
SSBP3-212ENST00000528930 NAT6Q93015 286 aa8.34□□□□□ -1.07
SSBP3-212ENST00000528930 SRPK1Q96SB4 655 aaKnown RBP8.34□□□□□ -1.07
SSBP3-212ENST00000528930 CCDC3Q9BQI4 270 aa8.34□□□□□ -1.07
SSBP3-212ENST00000528930 GPR63Q9BZJ6 419 aa8.34□□□□□ -1.07
SSBP3-212ENST00000528930 TSGA10Q9BZW7 698 aa8.34□□□□□ -1.07
SSBP3-212ENST00000528930 CDH19Q9H159 772 aa8.34□□□□□ -1.07
SSBP3-212ENST00000528930 GBA3Q9H227 469 aa8.34□□□□□ -1.07
SSBP3-212ENST00000528930 SUDS3Q9H7L9 328 aaPredicted RBP8.34□□□□□ -1.07
SSBP3-212ENST00000528930 RSPH14Q9UHP6 348 aa8.34□□□□□ -1.07
SSBP3-212ENST00000528930 TMPRSS11EQ9UL52 423 aa8.34□□□□□ -1.07
SSBP3-212ENST00000528930 GUCA1BQ9UMX6 200 aa8.34□□□□□ -1.07
SSBP3-212ENST00000528930 R3HDM2Q9Y2K5 976 aaKnown RBP8.34□□□□□ -1.07
SSBP3-212ENST00000528930 LOXL2Q9Y4K0 774 aa8.34□□□□□ -1.07
SSBP3-212ENST00000528930 PRRC2AP48634 2157 aaKnown RBP8.34□□□□□ -1.08
SSBP3-212ENST00000528930 A0A1W2PQM1 296 aa8.33□□□□□ -1.08
SSBP3-212ENST00000528930 C5orf60A6NFR6 353 aa8.33□□□□□ -1.08
SSBP3-212ENST00000528930 KIAA1324LA8MWY0 1029 aaPredicted RBP8.33□□□□□ -1.08
SSBP3-212ENST00000528930 B4DGG1 531 aa8.33□□□□□ -1.08
SSBP3-212ENST00000528930 MKRN2OSH3BPM6 223 aa8.33□□□□□ -1.08
SSBP3-212ENST00000528930 NKX2-8O15522 239 aa8.33□□□□□ -1.08
SSBP3-212ENST00000528930 DUX1O43812 170 aa8.33□□□□□ -1.08
SSBP3-212ENST00000528930 ASMTLO95671 621 aa8.33□□□□□ -1.08
SSBP3-212ENST00000528930 AGTP01019 485 aa8.33□□□□□ -1.08
SSBP3-212ENST00000528930 PDGFAP04085 211 aa8.33□□□□□ -1.08
SSBP3-212ENST00000528930 ATP1A1P05023 1023 aaKnown RBP8.33□□□□□ -1.08
SSBP3-212ENST00000528930 PNLIPP16233 465 aa8.33□□□□□ -1.08
SSBP3-212ENST00000528930 HLA-DPA1P20036 260 aa8.33□□□□□ -1.08
SSBP3-212ENST00000528930 PSMB4P28070 264 aa8.33□□□□□ -1.08
SSBP3-212ENST00000528930 ADH6P28332 368 aa8.33□□□□□ -1.08
SSBP3-212ENST00000528930 CA5AP35218 305 aa8.33□□□□□ -1.08
SSBP3-212ENST00000528930 GEMP55040 296 aa8.33□□□□□ -1.08
SSBP3-212ENST00000528930 ILF3Q12906 894 aaKnown RBP eCLIP8.33□□□□□ -1.08
SSBP3-212ENST00000528930 C14orf28Q4W4Y0 310 aa8.33□□□□□ -1.08
SSBP3-212ENST00000528930 PRR30Q53SZ7 412 aaPredicted RBP8.33□□□□□ -1.08
SSBP3-212ENST00000528930 ZRANB3Q5FWF4 1079 aa8.33□□□□□ -1.08
SSBP3-212ENST00000528930 CERCAMQ5T4B2 595 aa8.33□□□□□ -1.08
SSBP3-212ENST00000528930 ZNF648Q5T619 568 aaPredicted RBP8.33□□□□□ -1.08
SSBP3-212ENST00000528930 MEI1Q5TIA1 1274 aa8.33□□□□□ -1.08
SSBP3-212ENST00000528930 ALS2CLQ60I27 953 aa8.33□□□□□ -1.08
SSBP3-212ENST00000528930 ITPRIPL1Q6GPH6 555 aa8.33□□□□□ -1.08
SSBP3-212ENST00000528930 CCDC70Q6NSX1 233 aa8.33□□□□□ -1.08
SSBP3-212ENST00000528930 FIGNL1Q6PIW4 674 aa8.33□□□□□ -1.08
SSBP3-212ENST00000528930 RANBP10Q6VN20 620 aa8.33□□□□□ -1.08
SSBP3-212ENST00000528930 MARK2Q7KZI7 788 aaKnown RBP8.33□□□□□ -1.08
SSBP3-212ENST00000528930 TAOK1Q7L7X3 1001 aa8.33□□□□□ -1.08
SSBP3-212ENST00000528930 NAGSQ8N159 534 aa8.33□□□□□ -1.08
SSBP3-212ENST00000528930 OR6C4Q8NGE1 309 aa8.33□□□□□ -1.08
SSBP3-212ENST00000528930 SLC35B2Q8TB61 432 aa8.33□□□□□ -1.08
SSBP3-212ENST00000528930 CCDC110Q8TBZ0 833 aa8.33□□□□□ -1.08
SSBP3-212ENST00000528930 DTX3LQ8TDB6 740 aa8.33□□□□□ -1.08
SSBP3-212ENST00000528930 JPH3Q8WXH2 748 aaPredicted RBP8.33□□□□□ -1.08
SSBP3-212ENST00000528930 CCDC74AQ96AQ1 378 aa8.33□□□□□ -1.08
SSBP3-212ENST00000528930 TMEM159Q96B96 161 aa8.33□□□□□ -1.08
SSBP3-212ENST00000528930 SPATA13Q96N96 652 aa8.33□□□□□ -1.08
SSBP3-212ENST00000528930 OR2M4Q96R27 311 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms