RNA–Protein interactions for RNA: ENST00000528599.1

TRAF3IP2-211, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best)

Gene TRAF3IP2, Length 1,663 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-211ENST00000528599 PI4KAP42356 2102 aa11.93□□□□□ -0.5
TRAF3IP2-211ENST00000528599 C17orf113A0A1B0GUU1 675 aa11.93□□□□□ -0.5
TRAF3IP2-211ENST00000528599 PRR19A6NJB7 356 aa11.93□□□□□ -0.5
TRAF3IP2-211ENST00000528599 WISP3O95389 354 aaPredicted RBP11.93□□□□□ -0.5
TRAF3IP2-211ENST00000528599 CELA2BP08218 269 aaPredicted RBP11.93□□□□□ -0.5
TRAF3IP2-211ENST00000528599 STMN1P16949 149 aa11.93□□□□□ -0.5
TRAF3IP2-211ENST00000528599 SKIV2L2P42285 1042 aaKnown RBP11.93□□□□□ -0.5
TRAF3IP2-211ENST00000528599 SERPINB8P50452 374 aa11.93□□□□□ -0.5
TRAF3IP2-211ENST00000528599 RAB10P61026 200 aa11.93□□□□□ -0.5
TRAF3IP2-211ENST00000528599 CTBSQ01459 385 aa11.93□□□□□ -0.5
TRAF3IP2-211ENST00000528599 GRIK2Q13002 908 aa11.93□□□□□ -0.5
TRAF3IP2-211ENST00000528599 DNAJC3Q13217 504 aa11.93□□□□□ -0.5
TRAF3IP2-211ENST00000528599 BOP1Q14137 746 aaKnown RBP11.93□□□□□ -0.5
TRAF3IP2-211ENST00000528599 PPM1JQ5JR12 505 aa11.93□□□□□ -0.5
TRAF3IP2-211ENST00000528599 SLC23A3Q6PIS1 610 aa11.93□□□□□ -0.5
TRAF3IP2-211ENST00000528599 OTOAQ7RTW8 1153 aa11.93□□□□□ -0.5
TRAF3IP2-211ENST00000528599 RABEPKQ7Z6M1 372 aa11.93□□□□□ -0.5
TRAF3IP2-211ENST00000528599 CROCCP2Q86T23 111 aa11.93□□□□□ -0.5
TRAF3IP2-211ENST00000528599 NRROSQ86YC3 692 aa11.93□□□□□ -0.5
TRAF3IP2-211ENST00000528599 CFAP206Q8IYR0 622 aa11.93□□□□□ -0.5
TRAF3IP2-211ENST00000528599 ZBTB2Q8N680 514 aa11.93□□□□□ -0.5
TRAF3IP2-211ENST00000528599 FAM76AQ8TAV0 307 aa11.93□□□□□ -0.5
TRAF3IP2-211ENST00000528599 HM13Q8TCT9 377 aa11.93□□□□□ -0.5
TRAF3IP2-211ENST00000528599 INPP5DQ92835 1189 aa11.93□□□□□ -0.5
TRAF3IP2-211ENST00000528599 TSPAN17Q96FV3 270 aa11.93□□□□□ -0.5
TRAF3IP2-211ENST00000528599 TIMM29Q9BSF4 260 aa11.93□□□□□ -0.5
TRAF3IP2-211ENST00000528599 SLC13A1Q9BZW2 595 aa11.93□□□□□ -0.5
TRAF3IP2-211ENST00000528599 CENPHQ9H3R5 247 aa11.93□□□□□ -0.5
TRAF3IP2-211ENST00000528599 COG4Q9H9E3 785 aa11.93□□□□□ -0.5
TRAF3IP2-211ENST00000528599 TMBIM4Q9HC24 238 aa11.93□□□□□ -0.5
TRAF3IP2-211ENST00000528599 KLC4Q9NSK0 619 aa11.93□□□□□ -0.5
TRAF3IP2-211ENST00000528599 APOBEC3BQ9UH17 382 aaKnown RBP11.93□□□□□ -0.5
TRAF3IP2-211ENST00000528599 TRMT6Q9UJA5 497 aaKnown RBP11.93□□□□□ -0.5
TRAF3IP2-211ENST00000528599 GMEB2Q9UKD1 530 aa11.93□□□□□ -0.5
TRAF3IP2-211ENST00000528599 TP53BP1Q12888 1972 aaPredicted RBP11.93□□□□□ -0.5
TRAF3IP2-211ENST00000528599 CACNA1EQ15878 2313 aa11.93□□□□□ -0.5
TRAF3IP2-211ENST00000528599 SLC5A10A0PJK1 596 aa11.92□□□□□ -0.5
TRAF3IP2-211ENST00000528599 HMGB1P1B2RPK0 211 aaPredicted RBP11.92□□□□□ -0.5
TRAF3IP2-211ENST00000528599 RGS16O15492 202 aaPredicted RBP11.92□□□□□ -0.5
TRAF3IP2-211ENST00000528599 GPC4O75487 556 aa11.92□□□□□ -0.5
TRAF3IP2-211ENST00000528599 C2P06681 752 aa11.92□□□□□ -0.5
TRAF3IP2-211ENST00000528599 GSTM1P09488 218 aa11.92□□□□□ -0.5
TRAF3IP2-211ENST00000528599 MYZAPP0CAP1 466 aa11.92□□□□□ -0.5
TRAF3IP2-211ENST00000528599 SLC35E2BP0CK96 405 aa11.92□□□□□ -0.5
TRAF3IP2-211ENST00000528599 KRT15P19012 456 aa11.92□□□□□ -0.5
TRAF3IP2-211ENST00000528599 AK4P27144 223 aaPredicted RBP11.92□□□□□ -0.5
TRAF3IP2-211ENST00000528599 TYK2P29597 1187 aa11.92□□□□□ -0.5
TRAF3IP2-211ENST00000528599 PDHA2P29803 388 aa11.92□□□□□ -0.5
TRAF3IP2-211ENST00000528599 PREPP48147 710 aa11.92□□□□□ -0.5
TRAF3IP2-211ENST00000528599 BLKP51451 505 aa11.92□□□□□ -0.5
TRAF3IP2-211ENST00000528599 IRX4P78413 519 aa11.92□□□□□ -0.5
TRAF3IP2-211ENST00000528599 GSTM4Q03013 218 aa11.92□□□□□ -0.5
TRAF3IP2-211ENST00000528599 DMPKQ09013 629 aa11.92□□□□□ -0.5
TRAF3IP2-211ENST00000528599 HSPA14Q0VDF9 509 aa11.92□□□□□ -0.5
TRAF3IP2-211ENST00000528599 PDAP1Q13442 181 aaKnown RBP11.92□□□□□ -0.5
TRAF3IP2-211ENST00000528599 C1orf61Q13536 156 aa11.92□□□□□ -0.5
TRAF3IP2-211ENST00000528599 GBX1Q14549 363 aa11.92□□□□□ -0.5
TRAF3IP2-211ENST00000528599 SF3A2Q15428 464 aaKnown RBP11.92□□□□□ -0.5
TRAF3IP2-211ENST00000528599 SHBQ15464 509 aa11.92□□□□□ -0.5
TRAF3IP2-211ENST00000528599 ACSBG2Q5FVE4 666 aa11.92□□□□□ -0.5
TRAF3IP2-211ENST00000528599 TNFAIP8L3Q5GJ75 292 aa11.92□□□□□ -0.5
TRAF3IP2-211ENST00000528599 UGT3A1Q6NUS8 523 aa11.92□□□□□ -0.5
TRAF3IP2-211ENST00000528599 VRK3Q8IV63 474 aa11.92□□□□□ -0.5
TRAF3IP2-211ENST00000528599 CPNE9Q8IYJ1 553 aa11.92□□□□□ -0.5
TRAF3IP2-211ENST00000528599 ANKRD49Q8WVL7 239 aa11.92□□□□□ -0.5
TRAF3IP2-211ENST00000528599 ARL8AQ96BM9 186 aa11.92□□□□□ -0.5
TRAF3IP2-211ENST00000528599 PGM2Q96G03 612 aa11.92□□□□□ -0.5
TRAF3IP2-211ENST00000528599 LRRC61Q9BV99 259 aa11.92□□□□□ -0.5
TRAF3IP2-211ENST00000528599 POPDC3Q9HBV1 291 aa11.92□□□□□ -0.5
TRAF3IP2-211ENST00000528599 GPAMQ9HCL2 828 aa11.92□□□□□ -0.5
TRAF3IP2-211ENST00000528599 SEMA4GQ9NTN9 838 aa11.92□□□□□ -0.5
TRAF3IP2-211ENST00000528599 KLHL42Q9P2K6 505 aa11.92□□□□□ -0.5
TRAF3IP2-211ENST00000528599 WDFY3Q8IZQ1 3526 aa11.92□□□□□ -0.5
TRAF3IP2-211ENST00000528599 ADAMTS9Q9P2N4 1935 aa11.92□□□□□ -0.5
TRAF3IP2-211ENST00000528599 PCDH15Q96QU1 1955 aa11.92□□□□□ -0.5
TRAF3IP2-211ENST00000528599 SPTBN4Q9H254 2564 aa11.91□□□□□ -0.5
TRAF3IP2-211ENST00000528599 A0A096LPK6 155 aa11.91□□□□□ -0.5
TRAF3IP2-211ENST00000528599 GOLGA8RI6L899 631 aa11.91□□□□□ -0.5
TRAF3IP2-211ENST00000528599 LIN7AO14910 233 aaPredicted RBP11.91□□□□□ -0.5
TRAF3IP2-211ENST00000528599 KPNA5O15131 536 aa11.91□□□□□ -0.5
TRAF3IP2-211ENST00000528599 TSPAN12O95859 305 aa11.91□□□□□ -0.5
TRAF3IP2-211ENST00000528599 MT-ND3P03897 115 aa11.91□□□□□ -0.5
TRAF3IP2-211ENST00000528599 APOA4P06727 396 aa11.91□□□□□ -0.5
TRAF3IP2-211ENST00000528599 CTSEP14091 401 aa11.91□□□□□ -0.5
TRAF3IP2-211ENST00000528599 ZNF37AP17032 561 aaPredicted RBP11.91□□□□□ -0.5
TRAF3IP2-211ENST00000528599 CRABP2P29373 138 aa11.91□□□□□ -0.5
TRAF3IP2-211ENST00000528599 GYS2P54840 703 aa11.91□□□□□ -0.5
TRAF3IP2-211ENST00000528599 IRF9Q00978 393 aa11.91□□□□□ -0.5
TRAF3IP2-211ENST00000528599 LRP8Q14114 963 aa11.91□□□□□ -0.5
TRAF3IP2-211ENST00000528599 ZNF423Q2M1K9 1284 aa11.91□□□□□ -0.5
TRAF3IP2-211ENST00000528599 HLA-BQ31612 363 aa11.91□□□□□ -0.5
TRAF3IP2-211ENST00000528599 TTMPQ5BVD1 217 aa11.91□□□□□ -0.5
TRAF3IP2-211ENST00000528599 PRRT3Q5FWE3 981 aa11.91□□□□□ -0.5
TRAF3IP2-211ENST00000528599 PLEKHS1Q5SXH7 462 aa11.91□□□□□ -0.5
TRAF3IP2-211ENST00000528599 METRNLQ641Q3 311 aa11.91□□□□□ -0.5
TRAF3IP2-211ENST00000528599 SH2D5Q6ZV89 423 aa11.91□□□□□ -0.5
TRAF3IP2-211ENST00000528599 RAPH1Q70E73 1250 aa11.91□□□□□ -0.5
TRAF3IP2-211ENST00000528599 TRABD2AQ86V40 505 aa11.91□□□□□ -0.5
TRAF3IP2-211ENST00000528599 GPBAR1Q8TDU6 330 aa11.91□□□□□ -0.5
TRAF3IP2-211ENST00000528599 EEF1AKMT1Q8WVE0 214 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms