RNA–Protein interactions for RNA: ENST00000527887.1

CAPN1-212, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 348 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-212ENST00000527887 PPP1R3BQ86XI6 285 aa13.88□□□□□ -0.19
CAPN1-212ENST00000527887 RASGRP3Q8IV61 690 aa13.88□□□□□ -0.19
CAPN1-212ENST00000527887 CCDC110Q8TBZ0 833 aa13.88□□□□□ -0.19
CAPN1-212ENST00000527887 ALG3Q92685 438 aa13.88□□□□□ -0.19
CAPN1-212ENST00000527887 SLC41A2Q96JW4 573 aa13.88□□□□□ -0.19
CAPN1-212ENST00000527887 COPS8Q99627 209 aa13.88□□□□□ -0.19
CAPN1-212ENST00000527887 TBL1YQ9BQ87 522 aa13.88□□□□□ -0.19
CAPN1-212ENST00000527887 TRMT1Q9NXH9 659 aaKnown RBP13.88□□□□□ -0.19
CAPN1-212ENST00000527887 FKBPLQ9UIM3 349 aa13.88□□□□□ -0.19
CAPN1-212ENST00000527887 CRLS1Q9UJA2 301 aa13.88□□□□□ -0.19
CAPN1-212ENST00000527887 KCND3Q9UK17 655 aa13.88□□□□□ -0.19
CAPN1-212ENST00000527887 PCDHB3Q9Y5E6 796 aa13.88□□□□□ -0.19
CAPN1-212ENST00000527887 RPS6KL1Q9Y6S9 549 aa13.88□□□□□ -0.19
CAPN1-212ENST00000527887 ZFC3H1O60293 1989 aaKnown RBP13.88□□□□□ -0.19
CAPN1-212ENST00000527887 SDK2Q58EX2 2172 aa13.88□□□□□ -0.19
CAPN1-212ENST00000527887 USP27XA6NNY8 438 aa13.87□□□□□ -0.19
CAPN1-212ENST00000527887 GPR39O43194 453 aa13.87□□□□□ -0.19
CAPN1-212ENST00000527887 SPAG6O75602 509 aa13.87□□□□□ -0.19
CAPN1-212ENST00000527887 SLC35G4P0C7Q5 338 aa13.87□□□□□ -0.19
CAPN1-212ENST00000527887 CCNYL3P0C7X3 344 aa13.87□□□□□ -0.19
CAPN1-212ENST00000527887 ATP1B2P14415 290 aaPredicted RBP13.87□□□□□ -0.19
CAPN1-212ENST00000527887 TCN2P20062 427 aa13.87□□□□□ -0.19
CAPN1-212ENST00000527887 CA5AP35218 305 aa13.87□□□□□ -0.19
CAPN1-212ENST00000527887 ZNF140P52738 457 aaPredicted RBP13.87□□□□□ -0.19
CAPN1-212ENST00000527887 PTPRCAPQ14761 206 aa13.87□□□□□ -0.19
CAPN1-212ENST00000527887 PLCL1Q15111 1095 aa13.87□□□□□ -0.19
CAPN1-212ENST00000527887 P3H1Q32P28 736 aa13.87□□□□□ -0.19
CAPN1-212ENST00000527887 KCTD11Q693B1 232 aa13.87□□□□□ -0.19
CAPN1-212ENST00000527887 ZNF449Q6P9G9 518 aa13.87□□□□□ -0.19
CAPN1-212ENST00000527887 ATG14Q6ZNE5 492 aa13.87□□□□□ -0.19
CAPN1-212ENST00000527887 ARHGEF18Q6ZSZ5 1173 aa13.87□□□□□ -0.19
CAPN1-212ENST00000527887 FAM92BQ6ZTR7 304 aa13.87□□□□□ -0.19
CAPN1-212ENST00000527887 OOSP2Q86WS3 158 aa13.87□□□□□ -0.19
CAPN1-212ENST00000527887 NXPE1Q8N323 547 aa13.87□□□□□ -0.19
CAPN1-212ENST00000527887 RNF10Q8N5U6 811 aaKnown RBP13.87□□□□□ -0.19
CAPN1-212ENST00000527887 SIDT2Q8NBJ9 832 aaKnown RBP13.87□□□□□ -0.19
CAPN1-212ENST00000527887 HM13Q8TCT9 377 aa13.87□□□□□ -0.19
CAPN1-212ENST00000527887 KIR3DX1Q9H7L2 352 aa13.87□□□□□ -0.19
CAPN1-212ENST00000527887 LRRC40Q9H9A6 602 aa13.87□□□□□ -0.19
CAPN1-212ENST00000527887 VPS37BQ9H9H4 285 aa13.87□□□□□ -0.19
CAPN1-212ENST00000527887 IMP3Q9NV31 184 aaKnown RBP13.87□□□□□ -0.19
CAPN1-212ENST00000527887 PSMD13Q9UNM6 376 aa13.87□□□□□ -0.19
CAPN1-212ENST00000527887 SETXQ7Z333 2677 aaKnown RBP13.86□□□□□ -0.19
CAPN1-212ENST00000527887 OR5K3A6NET4 321 aa13.86□□□□□ -0.19
CAPN1-212ENST00000527887 TLCD2A6NGC4 264 aa13.86□□□□□ -0.19
CAPN1-212ENST00000527887 MATN2O00339 956 aa13.86□□□□□ -0.19
CAPN1-212ENST00000527887 NKX2-8O15522 239 aa13.86□□□□□ -0.19
CAPN1-212ENST00000527887 SUV39H1O43463 412 aa13.86□□□□□ -0.19
CAPN1-212ENST00000527887 LDB2O43679 373 aa13.86□□□□□ -0.19
CAPN1-212ENST00000527887 KIF1CO43896 1103 aaKnown RBP13.86□□□□□ -0.19
CAPN1-212ENST00000527887 KIF5CO60282 957 aa13.86□□□□□ -0.19
CAPN1-212ENST00000527887 STIP1P31948 543 aaKnown RBP13.86□□□□□ -0.19
CAPN1-212ENST00000527887 PRLHRP49683 370 aa13.86□□□□□ -0.19
CAPN1-212ENST00000527887 ARL4DP49703 201 aa13.86□□□□□ -0.19
CAPN1-212ENST00000527887 POLE2P56282 527 aa13.86□□□□□ -0.19
CAPN1-212ENST00000527887 SH3BP2P78314 561 aa13.86□□□□□ -0.19
CAPN1-212ENST00000527887 CDC20Q12834 499 aa13.86□□□□□ -0.19
CAPN1-212ENST00000527887 KCNAB2Q13303 367 aa13.86□□□□□ -0.19
CAPN1-212ENST00000527887 KLF1Q13351 362 aaPredicted RBP13.86□□□□□ -0.19
CAPN1-212ENST00000527887 CAPRIN2Q6IMN6 1127 aaKnown RBP13.86□□□□□ -0.19
CAPN1-212ENST00000527887 ARMC6Q6NXE6 501 aa13.86□□□□□ -0.19
CAPN1-212ENST00000527887 DET1Q7L5Y6 550 aa13.86□□□□□ -0.19
CAPN1-212ENST00000527887 C17orf53Q8N3J3 647 aaPredicted RBP13.86□□□□□ -0.19
CAPN1-212ENST00000527887 ACRBPQ8NEB7 543 aa13.86□□□□□ -0.19
CAPN1-212ENST00000527887 OR13C4Q8NGS5 318 aa13.86□□□□□ -0.19
CAPN1-212ENST00000527887 GPR150Q8NGU9 434 aa13.86□□□□□ -0.19
CAPN1-212ENST00000527887 OR8K5Q8NH50 307 aa13.86□□□□□ -0.19
CAPN1-212ENST00000527887 STYXQ8WUJ0 223 aa13.86□□□□□ -0.19
CAPN1-212ENST00000527887 APOBEC4Q8WW27 367 aaKnown RBP13.86□□□□□ -0.19
CAPN1-212ENST00000527887 STARD8Q92502 1023 aa13.86□□□□□ -0.19
CAPN1-212ENST00000527887 SEC14L1Q92503 715 aa13.86□□□□□ -0.19
CAPN1-212ENST00000527887 STAMBPL1Q96FJ0 436 aa13.86□□□□□ -0.19
CAPN1-212ENST00000527887 C12orf66Q96MD2 445 aa13.86□□□□□ -0.19
CAPN1-212ENST00000527887 INSM2Q96T92 566 aaPredicted RBP13.86□□□□□ -0.19
CAPN1-212ENST00000527887 APOL2Q9BQE5 337 aa13.86□□□□□ -0.19
CAPN1-212ENST00000527887 DESI2Q9BSY9 194 aa13.86□□□□□ -0.19
CAPN1-212ENST00000527887 FRMD8P1Q9BZ68 369 aaPredicted RBP13.86□□□□□ -0.19
CAPN1-212ENST00000527887 WWP1Q9H0M0 922 aa13.86□□□□□ -0.19
CAPN1-212ENST00000527887 HRASLS2Q9NWW9 162 aa13.86□□□□□ -0.19
CAPN1-212ENST00000527887 ZDHHC3Q9NYG2 299 aa13.86□□□□□ -0.19
CAPN1-212ENST00000527887 RARRES3Q9UL19 164 aa13.86□□□□□ -0.19
CAPN1-212ENST00000527887 PADI1Q9ULC6 663 aa13.86□□□□□ -0.19
CAPN1-212ENST00000527887 KCTD3Q9Y597 815 aa13.86□□□□□ -0.19
CAPN1-212ENST00000527887 PCDHGA6Q9Y5G7 932 aa13.86□□□□□ -0.19
CAPN1-212ENST00000527887 IGLV3-16A0A075B6K0 115 aa13.85□□□□□ -0.19
CAPN1-212ENST00000527887 IGHV5-51A0A0C4DH38 117 aa13.85□□□□□ -0.19
CAPN1-212ENST00000527887 TRBV5-4A0A0C4DH59 114 aa13.85□□□□□ -0.19
CAPN1-212ENST00000527887 UBA6A0AVT1 1052 aaPredicted RBP13.85□□□□□ -0.19
CAPN1-212ENST00000527887 C21orf140B9A014 251 aa13.85□□□□□ -0.19
CAPN1-212ENST00000527887 SGTAO43765 313 aa13.85□□□□□ -0.19
CAPN1-212ENST00000527887 KIAA0754O94854 1291 aa13.85□□□□□ -0.19
CAPN1-212ENST00000527887 WISP1O95388 367 aa13.85□□□□□ -0.19
CAPN1-212ENST00000527887 ZBTB11O95625 1053 aaPredicted RBP13.85□□□□□ -0.19
CAPN1-212ENST00000527887 PBLDP30039 288 aaPredicted RBP13.85□□□□□ -0.19
CAPN1-212ENST00000527887 CD151P48509 253 aa13.85□□□□□ -0.19
CAPN1-212ENST00000527887 HSD11B2P80365 405 aa13.85□□□□□ -0.19
CAPN1-212ENST00000527887 KCNC4Q03721 635 aa13.85□□□□□ -0.19
CAPN1-212ENST00000527887 RPA4Q13156 261 aa13.85□□□□□ -0.19
CAPN1-212ENST00000527887 LAMB3Q13751 1172 aa13.85□□□□□ -0.19
CAPN1-212ENST00000527887 TUBB2AQ13885 445 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms