RNA–Protein interactions for RNA: ENST00000527680.1

TRAPPC4-208, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 569 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-208ENST00000527680 DUS1LQ6P1R4 473 aaKnown RBP21.85■■□□□ 1.09
TRAPPC4-208ENST00000527680 FAM199XQ6PEV8 388 aaPredicted RBP21.85■■□□□ 1.09
TRAPPC4-208ENST00000527680 DARS2Q6PI48 645 aaKnown RBP21.85■■□□□ 1.09
TRAPPC4-208ENST00000527680 CERS6Q6ZMG9 384 aa21.85■■□□□ 1.09
TRAPPC4-208ENST00000527680 CCDC170Q8IYT3 715 aa21.85■■□□□ 1.09
TRAPPC4-208ENST00000527680 TC2NQ8N9U0 490 aa21.85■■□□□ 1.09
TRAPPC4-208ENST00000527680 ZFPM2Q8WW38 1151 aa21.85■■□□□ 1.09
TRAPPC4-208ENST00000527680 SEMA5BQ9P283 1151 aa21.85■■□□□ 1.09
TRAPPC4-208ENST00000527680 MAN2B2Q9Y2E5 1009 aa21.85■■□□□ 1.09
TRAPPC4-208ENST00000527680 HECTD1Q9ULT8 2610 aa21.84■■□□□ 1.09
TRAPPC4-208ENST00000527680 KLHL33A6NCF5 533 aa21.84■■□□□ 1.09
TRAPPC4-208ENST00000527680 C21orf140B9A014 251 aa21.84■■□□□ 1.09
TRAPPC4-208ENST00000527680 CRTAMO95727 393 aa21.84■■□□□ 1.09
TRAPPC4-208ENST00000527680 NR1D1P20393 614 aa21.84■■□□□ 1.09
TRAPPC4-208ENST00000527680 CYLC1P35663 651 aaPredicted RBP21.84■■□□□ 1.09
TRAPPC4-208ENST00000527680 EIF3EP60228 445 aaKnown RBP21.84■■□□□ 1.09
TRAPPC4-208ENST00000527680 COPS2P61201 443 aa21.84■■□□□ 1.09
TRAPPC4-208ENST00000527680 RPS15P62841 145 aaKnown RBP21.84■■□□□ 1.09
TRAPPC4-208ENST00000527680 TMPRSS15P98073 1019 aa21.84■■□□□ 1.09
TRAPPC4-208ENST00000527680 OTUD4Q01804 1114 aaKnown RBP21.84■■□□□ 1.09
TRAPPC4-208ENST00000527680 ANKRD20A2Q5SQ80 823 aa21.84■■□□□ 1.09
TRAPPC4-208ENST00000527680 ANKRD20A1Q5TYW2 823 aa21.84■■□□□ 1.09
TRAPPC4-208ENST00000527680 ANKRD20A3Q5VUR7 823 aa21.84■■□□□ 1.09
TRAPPC4-208ENST00000527680 RANBP10Q6VN20 620 aa21.84■■□□□ 1.09
TRAPPC4-208ENST00000527680 CDKL3Q8IVW4 592 aaPredicted RBP21.84■■□□□ 1.09
TRAPPC4-208ENST00000527680 SPDYE1Q8NFV5 336 aaPredicted RBP21.84■■□□□ 1.09
TRAPPC4-208ENST00000527680 OR4E2Q8NGC2 313 aa21.84■■□□□ 1.09
TRAPPC4-208ENST00000527680 ACTL9Q8TC94 416 aa21.84■■□□□ 1.09
TRAPPC4-208ENST00000527680 SOHLH2Q9NX45 425 aa21.84■■□□□ 1.09
TRAPPC4-208ENST00000527680 SLC24A2Q9UI40 661 aa21.84■■□□□ 1.09
TRAPPC4-208ENST00000527680 PCDHGA6Q9Y5G7 932 aa21.84■■□□□ 1.09
TRAPPC4-208ENST00000527680 CYSRT1A8MQ03 144 aa21.83■■□□□ 1.09
TRAPPC4-208ENST00000527680 KCNN4O15554 427 aa21.83■■□□□ 1.09
TRAPPC4-208ENST00000527680 RFPL1O75677 317 aa21.83■■□□□ 1.09
TRAPPC4-208ENST00000527680 LCA5LO95447 670 aa21.83■■□□□ 1.09
TRAPPC4-208ENST00000527680 PYGMP11217 842 aa21.83■■□□□ 1.09
TRAPPC4-208ENST00000527680 PSMB4P28070 264 aa21.83■■□□□ 1.09
TRAPPC4-208ENST00000527680 CETN2P41208 172 aa21.83■■□□□ 1.09
TRAPPC4-208ENST00000527680 ARCN1P48444 511 aaKnown RBP21.83■■□□□ 1.09
TRAPPC4-208ENST00000527680 FOXK1P85037 733 aa21.83■■□□□ 1.09
TRAPPC4-208ENST00000527680 PRKAA1Q13131 559 aa21.83■■□□□ 1.09
TRAPPC4-208ENST00000527680 OLIG2Q13516 323 aa21.83■■□□□ 1.09
TRAPPC4-208ENST00000527680 TCTN3Q6NUS6 607 aa21.83■■□□□ 1.09
TRAPPC4-208ENST00000527680 ASB18Q6ZVZ8 466 aa21.83■■□□□ 1.09
TRAPPC4-208ENST00000527680 TMEM126BQ8IUX1 230 aa21.83■■□□□ 1.09
TRAPPC4-208ENST00000527680 D2HGDHQ8N465 521 aa21.83■■□□□ 1.09
TRAPPC4-208ENST00000527680 LRRC45Q96CN5 670 aa21.83■■□□□ 1.09
TRAPPC4-208ENST00000527680 GPR87Q9BY21 358 aa21.83■■□□□ 1.09
TRAPPC4-208ENST00000527680 ACTL8Q9H568 366 aa21.83■■□□□ 1.09
TRAPPC4-208ENST00000527680 FAM96AQ9H5X1 160 aa21.83■■□□□ 1.09
TRAPPC4-208ENST00000527680 AKIRIN1Q9H9L7 192 aaPredicted RBP21.83■■□□□ 1.09
TRAPPC4-208ENST00000527680 KCND1Q9NSA2 647 aa21.83■■□□□ 1.09
TRAPPC4-208ENST00000527680 TLK1Q9UKI8 766 aa21.83■■□□□ 1.09
TRAPPC4-208ENST00000527680 NBASA2RRP1 2371 aa21.82■■□□□ 1.08
TRAPPC4-208ENST00000527680 SCRG1O75711 98 aa21.82■■□□□ 1.08
TRAPPC4-208ENST00000527680 ZBTB11O95625 1053 aaPredicted RBP21.82■■□□□ 1.08
TRAPPC4-208ENST00000527680 RECKO95980 971 aa21.82■■□□□ 1.08
TRAPPC4-208ENST00000527680 RBP3P10745 1247 aa21.82■■□□□ 1.08
TRAPPC4-208ENST00000527680 POLR2CP19387 275 aaPredicted RBP21.82■■□□□ 1.08
TRAPPC4-208ENST00000527680 TUBB4BP68371 445 aa21.82■■□□□ 1.08
TRAPPC4-208ENST00000527680 TUBB2AQ13885 445 aa21.82■■□□□ 1.08
TRAPPC4-208ENST00000527680 GPR19Q15760 415 aa21.82■■□□□ 1.08
TRAPPC4-208ENST00000527680 OR13C4Q8NGS5 318 aa21.82■■□□□ 1.08
TRAPPC4-208ENST00000527680 SEC14L1Q92503 715 aa21.82■■□□□ 1.08
TRAPPC4-208ENST00000527680 MR1Q95460 341 aa21.82■■□□□ 1.08
TRAPPC4-208ENST00000527680 ULK4Q96C45 1275 aa21.82■■□□□ 1.08
TRAPPC4-208ENST00000527680 FAM118BQ9BPY3 351 aa21.82■■□□□ 1.08
TRAPPC4-208ENST00000527680 CCM2Q9BSQ5 444 aa21.82■■□□□ 1.08
TRAPPC4-208ENST00000527680 TUBB2BQ9BVA1 445 aa21.82■■□□□ 1.08
TRAPPC4-208ENST00000527680 OSBPL8Q9BZF1 889 aa21.82■■□□□ 1.08
TRAPPC4-208ENST00000527680 KIR3DX1Q9H7L2 352 aa21.82■■□□□ 1.08
TRAPPC4-208ENST00000527680 PCDHA3Q9Y5H8 950 aa21.82■■□□□ 1.08
TRAPPC4-208ENST00000527680 HEBP2Q9Y5Z4 205 aa21.82■■□□□ 1.08
TRAPPC4-208ENST00000527680 CCDC66A2RUB6 948 aa21.81■■□□□ 1.08
TRAPPC4-208ENST00000527680 CFAP99D6REC4 459 aa21.81■■□□□ 1.08
TRAPPC4-208ENST00000527680 K7EM74 188 aa21.81■■□□□ 1.08
TRAPPC4-208ENST00000527680 CPNE3O75131 537 aaKnown RBP21.81■■□□□ 1.08
TRAPPC4-208ENST00000527680 PTMAP06454 111 aaKnown RBP21.81■■□□□ 1.08
TRAPPC4-208ENST00000527680 KLK3P07288 261 aaPredicted RBP21.81■■□□□ 1.08
TRAPPC4-208ENST00000527680 ITGALP20701 1170 aa21.81■■□□□ 1.08
TRAPPC4-208ENST00000527680 CDH3P22223 829 aa21.81■■□□□ 1.08
TRAPPC4-208ENST00000527680 NDUFS1P28331 727 aa21.81■■□□□ 1.08
TRAPPC4-208ENST00000527680 PTPN4P29074 926 aa21.81■■□□□ 1.08
TRAPPC4-208ENST00000527680 ADRA1AP35348 466 aa21.81■■□□□ 1.08
TRAPPC4-208ENST00000527680 UBAP2LQ14157 1087 aaKnown RBP21.81■■□□□ 1.08
TRAPPC4-208ENST00000527680 BCL7AQ4VC05 210 aa21.81■■□□□ 1.08
TRAPPC4-208ENST00000527680 FBXO38Q6PIJ6 1188 aa21.81■■□□□ 1.08
TRAPPC4-208ENST00000527680 CCDC110Q8TBZ0 833 aa21.81■■□□□ 1.08
TRAPPC4-208ENST00000527680 FERD3LQ96RJ6 166 aa21.81■■□□□ 1.08
TRAPPC4-208ENST00000527680 RUFY1Q96T51 708 aa21.81■■□□□ 1.08
TRAPPC4-208ENST00000527680 COPS8Q99627 209 aa21.81■■□□□ 1.08
TRAPPC4-208ENST00000527680 GORASP1Q9BQQ3 440 aa21.81■■□□□ 1.08
TRAPPC4-208ENST00000527680 EFR3BQ9Y2G0 817 aa21.81■■□□□ 1.08
TRAPPC4-208ENST00000527680 DDX3YO15523 660 aaKnown RBP21.8■■□□□ 1.08
TRAPPC4-208ENST00000527680 IPO7O95373 1038 aaKnown RBP21.8■■□□□ 1.08
TRAPPC4-208ENST00000527680 ATP1B2P14415 290 aaPredicted RBP21.8■■□□□ 1.08
TRAPPC4-208ENST00000527680 CTNNA1P35221 906 aaKnown RBP21.8■■□□□ 1.08
TRAPPC4-208ENST00000527680 HADHAP40939 763 aa21.8■■□□□ 1.08
TRAPPC4-208ENST00000527680 KPNA2P52292 529 aaKnown RBP21.8■■□□□ 1.08
TRAPPC4-208ENST00000527680 PMS2P54278 862 aa21.8■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms