RNA–Protein interactions for RNA: ENST00000527644.1

TSPAN4-217, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 968 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-217ENST00000527644 CAPRIN2Q6IMN6 1127 aaKnown RBP25.77■■□□□ 1.72
TSPAN4-217ENST00000527644 TTC27Q6P3X3 843 aa25.77■■□□□ 1.72
TSPAN4-217ENST00000527644 PACS1Q6VY07 963 aa25.77■■□□□ 1.72
TSPAN4-217ENST00000527644 CERS6Q6ZMG9 384 aa25.77■■□□□ 1.72
TSPAN4-217ENST00000527644 FAM129CQ86XR2 697 aa25.77■■□□□ 1.72
TSPAN4-217ENST00000527644 LILRA3Q8N6C8 439 aaPredicted RBP25.77■■□□□ 1.72
TSPAN4-217ENST00000527644 CLDN19Q8N6F1 224 aa25.77■■□□□ 1.72
TSPAN4-217ENST00000527644 OR4L1Q8NH43 312 aa25.77■■□□□ 1.72
TSPAN4-217ENST00000527644 ACTRT1Q8TDG2 376 aa25.77■■□□□ 1.72
TSPAN4-217ENST00000527644 C9orf72Q96LT7 481 aa25.77■■□□□ 1.72
TSPAN4-217ENST00000527644 IL22Q9GZX6 179 aa25.77■■□□□ 1.72
TSPAN4-217ENST00000527644 RAB33BQ9H082 229 aa25.77■■□□□ 1.72
TSPAN4-217ENST00000527644 SLC39A1Q9NY26 324 aa25.77■■□□□ 1.72
TSPAN4-217ENST00000527644 EPHA6Q9UF33 1036 aa25.77■■□□□ 1.72
TSPAN4-217ENST00000527644 CFAP20Q9Y6A4 193 aaKnown RBP25.77■■□□□ 1.72
TSPAN4-217ENST00000527644 CES2O00748 559 aa25.76■■□□□ 1.71
TSPAN4-217ENST00000527644 TOX3O15405 576 aaPredicted RBP25.76■■□□□ 1.71
TSPAN4-217ENST00000527644 CAPN5O15484 640 aaPredicted RBP25.76■■□□□ 1.71
TSPAN4-217ENST00000527644 LIPCP11150 499 aa25.76■■□□□ 1.71
TSPAN4-217ENST00000527644 GFERP55789 205 aa25.76■■□□□ 1.71
TSPAN4-217ENST00000527644 PRAMEP78395 509 aa25.76■■□□□ 1.71
TSPAN4-217ENST00000527644 TRIP13Q15645 432 aaPredicted RBP25.76■■□□□ 1.71
TSPAN4-217ENST00000527644 ZNF449Q6P9G9 518 aa25.76■■□□□ 1.71
TSPAN4-217ENST00000527644 KLHL35Q6PF15 583 aa25.76■■□□□ 1.71
TSPAN4-217ENST00000527644 BMPERQ8N8U9 685 aa25.76■■□□□ 1.71
TSPAN4-217ENST00000527644 SPDYE1Q8NFV5 336 aaPredicted RBP25.76■■□□□ 1.71
TSPAN4-217ENST00000527644 OR6P1Q8NGX9 317 aa25.76■■□□□ 1.71
TSPAN4-217ENST00000527644 COG1Q8WTW3 980 aa25.76■■□□□ 1.71
TSPAN4-217ENST00000527644 RSC1A1Q92681 617 aa25.76■■□□□ 1.71
TSPAN4-217ENST00000527644 ART4Q93070 314 aa25.76■■□□□ 1.71
TSPAN4-217ENST00000527644 ZDHHC12Q96GR4 267 aa25.76■■□□□ 1.71
TSPAN4-217ENST00000527644 DDA1Q9BW61 102 aa25.76■■□□□ 1.71
TSPAN4-217ENST00000527644 ASPSCR1Q9BZE9 553 aa25.76■■□□□ 1.71
TSPAN4-217ENST00000527644 COG4Q9H9E3 785 aa25.76■■□□□ 1.71
TSPAN4-217ENST00000527644 CHRAC1Q9NRG0 131 aa25.76■■□□□ 1.71
TSPAN4-217ENST00000527644 SNX12Q9UMY4 172 aa25.76■■□□□ 1.71
TSPAN4-217ENST00000527644 HEBP2Q9Y5Z4 205 aa25.76■■□□□ 1.71
TSPAN4-217ENST00000527644 COLEC10Q9Y6Z7 277 aa25.76■■□□□ 1.71
TSPAN4-217ENST00000527644 KRT14P02533 472 aa25.75■■□□□ 1.71
TSPAN4-217ENST00000527644 COILP38432 576 aaPredicted RBP25.75■■□□□ 1.71
TSPAN4-217ENST00000527644 RAB15P59190 212 aa25.75■■□□□ 1.71
TSPAN4-217ENST00000527644 RPA4Q13156 261 aa25.75■■□□□ 1.71
TSPAN4-217ENST00000527644 GSE1Q14687 1217 aa25.75■■□□□ 1.71
TSPAN4-217ENST00000527644 ZNF658BQ4V348 819 aaPredicted RBP25.75■■□□□ 1.71
TSPAN4-217ENST00000527644 LRRC8BQ6P9F7 803 aa25.75■■□□□ 1.71
TSPAN4-217ENST00000527644 RMDN2Q96LZ7 410 aa25.75■■□□□ 1.71
TSPAN4-217ENST00000527644 FCRL3Q96P31 734 aaPredicted RBP25.75■■□□□ 1.71
TSPAN4-217ENST00000527644 TGM7Q96PF1 710 aa25.75■■□□□ 1.71
TSPAN4-217ENST00000527644 NDUFS1P28331 727 aa25.74■■□□□ 1.71
TSPAN4-217ENST00000527644 PPARGP37231 505 aaPredicted RBP25.74■■□□□ 1.71
TSPAN4-217ENST00000527644 CXADRP78310 365 aa25.74■■□□□ 1.71
TSPAN4-217ENST00000527644 SARNPP82979 210 aaKnown RBP25.74■■□□□ 1.71
TSPAN4-217ENST00000527644 MC2RQ01718 297 aa25.74■■□□□ 1.71
TSPAN4-217ENST00000527644 GPS1Q13098 491 aa25.74■■□□□ 1.71
TSPAN4-217ENST00000527644 PLCL1Q15111 1095 aa25.74■■□□□ 1.71
TSPAN4-217ENST00000527644 FASTKD1Q53R41 847 aaKnown RBP25.74■■□□□ 1.71
TSPAN4-217ENST00000527644 DCAF12Q5T6F0 453 aa25.74■■□□□ 1.71
TSPAN4-217ENST00000527644 CCDC137Q6PK04 289 aaKnown RBP25.74■■□□□ 1.71
TSPAN4-217ENST00000527644 ZNF534Q76KX8 674 aa25.74■■□□□ 1.71
TSPAN4-217ENST00000527644 ZFAND4Q86XD8 727 aa25.74■■□□□ 1.71
TSPAN4-217ENST00000527644 FBXO8Q9NRD0 319 aa25.74■■□□□ 1.71
TSPAN4-217ENST00000527644 B3GALT1Q9Y5Z6 326 aa25.74■■□□□ 1.71
TSPAN4-217ENST00000527644 PRSS21Q9Y6M0 314 aa25.74■■□□□ 1.71
TSPAN4-217ENST00000527644 IQCJ-SCHIP1C9J366 451 aaPredicted RBP25.73■■□□□ 1.71
TSPAN4-217ENST00000527644 FTH1P02794 183 aa25.73■■□□□ 1.71
TSPAN4-217ENST00000527644 MAGEA6P43360 314 aa25.73■■□□□ 1.71
TSPAN4-217ENST00000527644 LEPRP48357 1165 aaKnown RBP25.73■■□□□ 1.71
TSPAN4-217ENST00000527644 CD151P48509 253 aa25.73■■□□□ 1.71
TSPAN4-217ENST00000527644 VPS41P49754 854 aa25.73■■□□□ 1.71
TSPAN4-217ENST00000527644 DUS1LQ6P1R4 473 aaKnown RBP25.73■■□□□ 1.71
TSPAN4-217ENST00000527644 GPR155Q7Z3F1 870 aa25.73■■□□□ 1.71
TSPAN4-217ENST00000527644 PMEPA1Q969W9 287 aa25.73■■□□□ 1.71
TSPAN4-217ENST00000527644 TEFMQ96QE5 360 aaKnown RBP25.73■■□□□ 1.71
TSPAN4-217ENST00000527644 OR52A5Q9H2C5 316 aa25.73■■□□□ 1.71
TSPAN4-217ENST00000527644 KIR3DX1Q9H7L2 352 aa25.73■■□□□ 1.71
TSPAN4-217ENST00000527644 SLC24A2Q9UI40 661 aa25.73■■□□□ 1.71
TSPAN4-217ENST00000527644 PCDHB11Q9Y5F2 797 aa25.73■■□□□ 1.71
TSPAN4-217ENST00000527644 PIKFYVEQ9Y2I7 2098 aa25.73■■□□□ 1.71
TSPAN4-217ENST00000527644 GOLGA6L10A0A0M3HER8 536 aa25.72■■□□□ 1.71
TSPAN4-217ENST00000527644 TCRBV7S3A2A0A539 114 aa25.72■■□□□ 1.71
TSPAN4-217ENST00000527644 F8W8V4 182 aa25.72■■□□□ 1.71
TSPAN4-217ENST00000527644 IFRD1O00458 451 aaPredicted RBP25.72■■□□□ 1.71
TSPAN4-217ENST00000527644 OR56A5P0C7T3 313 aa25.72■■□□□ 1.71
TSPAN4-217ENST00000527644 CRADDP78560 199 aa25.72■■□□□ 1.71
TSPAN4-217ENST00000527644 KRT33BQ14525 404 aa25.72■■□□□ 1.71
TSPAN4-217ENST00000527644 KCNJ11Q14654 390 aa25.72■■□□□ 1.71
TSPAN4-217ENST00000527644 TGIF1Q15583 401 aa25.72■■□□□ 1.71
TSPAN4-217ENST00000527644 KCTD19Q17RG1 926 aaPredicted RBP25.72■■□□□ 1.71
TSPAN4-217ENST00000527644 AARS2Q5JTZ9 985 aaKnown RBP25.72■■□□□ 1.71
TSPAN4-217ENST00000527644 IRGCQ6NXR0 463 aa25.72■■□□□ 1.71
TSPAN4-217ENST00000527644 PRSS42Q7Z5A4 293 aa25.72■■□□□ 1.71
TSPAN4-217ENST00000527644 DTX1Q86Y01 620 aa25.72■■□□□ 1.71
TSPAN4-217ENST00000527644 JPH3Q8WXH2 748 aaPredicted RBP25.72■■□□□ 1.71
TSPAN4-217ENST00000527644 CCNL2Q96S94 520 aaPredicted RBP25.72■■□□□ 1.71
TSPAN4-217ENST00000527644 ZNF768Q9H5H4 540 aaKnown RBP25.72■■□□□ 1.71
TSPAN4-217ENST00000527644 MRM3Q9HC36 420 aaKnown RBP25.72■■□□□ 1.71
TSPAN4-217ENST00000527644 CPNE5Q9HCH3 593 aa25.72■■□□□ 1.71
TSPAN4-217ENST00000527644 TREX1Q9NSU2 369 aa25.72■■□□□ 1.71
TSPAN4-217ENST00000527644 ANAPC5Q9UJX4 755 aa25.72■■□□□ 1.71
TSPAN4-217ENST00000527644 USP27XA6NNY8 438 aa25.71■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms