RNA–Protein interactions for RNA: ENST00000527323.5

CAPN1-208, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-208ENST00000527323 IKZF3Q9UKT9 509 aa12.34□□□□□ -0.43
CAPN1-208ENST00000527323 WDR37Q9Y2I8 494 aa12.34□□□□□ -0.43
CAPN1-208ENST00000527323 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.34□□□□□ -0.43
CAPN1-208ENST00000527323 MAN1A2O60476 641 aa12.34□□□□□ -0.43
CAPN1-208ENST00000527323 BCAS1O75363 584 aaPredicted RBP12.34□□□□□ -0.43
CAPN1-208ENST00000527323 CST1P01037 141 aa12.34□□□□□ -0.43
CAPN1-208ENST00000527323 ALPLP05186 524 aa12.34□□□□□ -0.43
CAPN1-208ENST00000527323 HMBSP08397 361 aa12.34□□□□□ -0.43
CAPN1-208ENST00000527323 ATXN1LP0C7T5 689 aaKnown RBP12.34□□□□□ -0.43
CAPN1-208ENST00000527323 PAX3P23760 479 aa12.34□□□□□ -0.43
CAPN1-208ENST00000527323 TSPY1Q01534 308 aa12.34□□□□□ -0.43
CAPN1-208ENST00000527323 GRIK2Q13002 908 aa12.34□□□□□ -0.43
CAPN1-208ENST00000527323 LAPTM5Q13571 262 aa12.34□□□□□ -0.43
CAPN1-208ENST00000527323 SPCS2Q15005 226 aa12.34□□□□□ -0.43
CAPN1-208ENST00000527323 C6orf141Q5SZD1 244 aa12.34□□□□□ -0.43
CAPN1-208ENST00000527323 FAM171BQ6P995 826 aa12.34□□□□□ -0.43
CAPN1-208ENST00000527323 SLC24A5Q71RS6 500 aa12.34□□□□□ -0.43
CAPN1-208ENST00000527323 RIMKLAQ8IXN7 391 aa12.34□□□□□ -0.43
CAPN1-208ENST00000527323 HS3ST5Q8IZT8 346 aa12.34□□□□□ -0.43
CAPN1-208ENST00000527323 PROKR1Q8TCW9 393 aa12.34□□□□□ -0.43
CAPN1-208ENST00000527323 GPR21Q99679 349 aa12.34□□□□□ -0.43
CAPN1-208ENST00000527323 CFHR5Q9BXR6 569 aa12.34□□□□□ -0.43
CAPN1-208ENST00000527323 GPR62Q9BZJ7 368 aa12.34□□□□□ -0.43
CAPN1-208ENST00000527323 SARS2Q9NP81 518 aaKnown RBP12.34□□□□□ -0.43
CAPN1-208ENST00000527323 ABI2Q9NYB9 513 aaPredicted RBP12.34□□□□□ -0.43
CAPN1-208ENST00000527323 PCDHGA8Q9Y5G5 932 aa12.34□□□□□ -0.43
CAPN1-208ENST00000527323 RALGAPA2Q2PPJ7 1873 aa12.33□□□□□ -0.44
CAPN1-208ENST00000527323 TRIM64BA6NI03 449 aa12.33□□□□□ -0.44
CAPN1-208ENST00000527323 CLDN25C9JDP6 229 aa12.33□□□□□ -0.44
CAPN1-208ENST00000527323 TULP3O75386 442 aa12.33□□□□□ -0.44
CAPN1-208ENST00000527323 MLYCDO95822 493 aa12.33□□□□□ -0.44
CAPN1-208ENST00000527323 GSTM2P28161 218 aa12.33□□□□□ -0.44
CAPN1-208ENST00000527323 STC1P52823 247 aa12.33□□□□□ -0.44
CAPN1-208ENST00000527323 ZNF235Q14590 738 aa12.33□□□□□ -0.44
CAPN1-208ENST00000527323 PLA2G4EQ3MJ16 856 aa12.33□□□□□ -0.44
CAPN1-208ENST00000527323 OVOS1Q6IE37 1185 aa12.33□□□□□ -0.44
CAPN1-208ENST00000527323 MSANTD2Q6P1R3 559 aa12.33□□□□□ -0.44
CAPN1-208ENST00000527323 PRSS55Q6UWB4 352 aaPredicted RBP12.33□□□□□ -0.44
CAPN1-208ENST00000527323 GPRIN3Q6ZVF9 776 aa12.33□□□□□ -0.44
CAPN1-208ENST00000527323 CIR1Q86X95 450 aaPredicted RBP12.33□□□□□ -0.44
CAPN1-208ENST00000527323 THEM5Q8N1Q8 247 aa12.33□□□□□ -0.44
CAPN1-208ENST00000527323 UMODL1-AS1Q8N2C9 162 aa12.33□□□□□ -0.44
CAPN1-208ENST00000527323 PGBD5Q8N414 524 aa12.33□□□□□ -0.44
CAPN1-208ENST00000527323 ATAD1Q8NBU5 361 aa12.33□□□□□ -0.44
CAPN1-208ENST00000527323 ST13P5Q8NFI4 369 aaPredicted RBP12.33□□□□□ -0.44
CAPN1-208ENST00000527323 ARRDC2Q8TBH0 407 aa12.33□□□□□ -0.44
CAPN1-208ENST00000527323 SERPINB11Q96P15 392 aa12.33□□□□□ -0.44
CAPN1-208ENST00000527323 EXD2Q9NVH0 621 aa12.33□□□□□ -0.44
CAPN1-208ENST00000527323 FAM118AQ9NWS6 357 aa12.33□□□□□ -0.44
CAPN1-208ENST00000527323 OSER1Q9NX31 292 aa12.33□□□□□ -0.44
CAPN1-208ENST00000527323 PCDHB3Q9Y5E6 796 aa12.33□□□□□ -0.44
CAPN1-208ENST00000527323 E2F6O75461 281 aa12.33□□□□□ -0.44
CAPN1-208ENST00000527323 RHOQP17081 205 aa12.33□□□□□ -0.44
CAPN1-208ENST00000527323 ZFP36L2P47974 494 aaKnown RBP12.33□□□□□ -0.44
CAPN1-208ENST00000527323 TBX4P57082 545 aa12.33□□□□□ -0.44
CAPN1-208ENST00000527323 EIF4EBP2Q13542 120 aaPredicted RBP12.33□□□□□ -0.44
CAPN1-208ENST00000527323 DSC3Q14574 896 aa12.33□□□□□ -0.44
CAPN1-208ENST00000527323 ZNF846Q147U1 533 aa12.33□□□□□ -0.44
CAPN1-208ENST00000527323 DDR2Q16832 855 aa12.33□□□□□ -0.44
CAPN1-208ENST00000527323 PTPRNQ16849 979 aa12.33□□□□□ -0.44
CAPN1-208ENST00000527323 FAM171A1Q5VUB5 890 aa12.33□□□□□ -0.44
CAPN1-208ENST00000527323 SULT1C3Q6IMI6 304 aa12.33□□□□□ -0.44
CAPN1-208ENST00000527323 SPESP1Q6UW49 350 aa12.33□□□□□ -0.44
CAPN1-208ENST00000527323 METTL6Q8TCB7 284 aa12.33□□□□□ -0.44
CAPN1-208ENST00000527323 CDKN2AIPNLQ96HQ2 116 aa12.33□□□□□ -0.44
CAPN1-208ENST00000527323 CYP2S1Q96SQ9 504 aa12.33□□□□□ -0.44
CAPN1-208ENST00000527323 NUSAP1Q9BXS6 441 aaKnown RBP12.33□□□□□ -0.44
CAPN1-208ENST00000527323 DERL2Q9GZP9 239 aa12.33□□□□□ -0.44
CAPN1-208ENST00000527323 ZIM2Q9NZV7 527 aa12.33□□□□□ -0.44
CAPN1-208ENST00000527323 EIF2B4Q9UI10 523 aaKnown RBP12.33□□□□□ -0.44
CAPN1-208ENST00000527323 PCDHB7Q9Y5E2 793 aa12.33□□□□□ -0.44
CAPN1-208ENST00000527323 DOCK6Q96HP0 2047 aa12.32□□□□□ -0.44
CAPN1-208ENST00000527323 LOC285095A0A1B0GVY8 99 aa12.32□□□□□ -0.44
CAPN1-208ENST00000527323 TMEM247A6NEH6 219 aa12.32□□□□□ -0.44
CAPN1-208ENST00000527323 UPK1AO00322 258 aa12.32□□□□□ -0.44
CAPN1-208ENST00000527323 HS6ST1O60243 411 aa12.32□□□□□ -0.44
CAPN1-208ENST00000527323 AGXTP21549 392 aa12.32□□□□□ -0.44
CAPN1-208ENST00000527323 LSM3P62310 102 aaKnown RBP12.32□□□□□ -0.44
CAPN1-208ENST00000527323 GSTM4Q03013 218 aa12.32□□□□□ -0.44
CAPN1-208ENST00000527323 EFEMP1Q12805 493 aa12.32□□□□□ -0.44
CAPN1-208ENST00000527323 NR6A1Q15406 480 aa12.32□□□□□ -0.44
CAPN1-208ENST00000527323 ANKRD34AQ69YU3 496 aa12.32□□□□□ -0.44
CAPN1-208ENST00000527323 IL27RAQ6UWB1 636 aa12.32□□□□□ -0.44
CAPN1-208ENST00000527323 BTLAQ7Z6A9 289 aa12.32□□□□□ -0.44
CAPN1-208ENST00000527323 BRSK1Q8TDC3 778 aa12.32□□□□□ -0.44
CAPN1-208ENST00000527323 HDAC2Q92769 488 aaKnown RBP12.32□□□□□ -0.44
CAPN1-208ENST00000527323 FUBP1Q96AE4 644 aaKnown RBP12.32□□□□□ -0.44
CAPN1-208ENST00000527323 RMDN1Q96DB5 314 aa12.32□□□□□ -0.44
CAPN1-208ENST00000527323 AURKBQ96GD4 344 aaPredicted RBP12.32□□□□□ -0.44
CAPN1-208ENST00000527323 SH3YL1Q96HL8 342 aaPredicted RBP12.32□□□□□ -0.44
CAPN1-208ENST00000527323 ZNF347Q96SE7 839 aa12.32□□□□□ -0.44
CAPN1-208ENST00000527323 CGREF1Q99674 301 aa12.32□□□□□ -0.44
CAPN1-208ENST00000527323 TBCDQ9BTW9 1192 aa12.32□□□□□ -0.44
CAPN1-208ENST00000527323 TDRD1Q9BXT4 1180 aaKnown RBP12.32□□□□□ -0.44
CAPN1-208ENST00000527323 UGT2B28Q9BY64 529 aa12.32□□□□□ -0.44
CAPN1-208ENST00000527323 POPDC3Q9HBV1 291 aa12.32□□□□□ -0.44
CAPN1-208ENST00000527323 HMG20AQ9NP66 347 aa12.32□□□□□ -0.44
CAPN1-208ENST00000527323 ATAD3AQ9NVI7 634 aa12.32□□□□□ -0.44
CAPN1-208ENST00000527323 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.32□□□□□ -0.44
CAPN1-208ENST00000527323 ZNF225Q9UK10 706 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms