RNA–Protein interactions for RNA: ENST00000527275.5

SMPD1-203, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SMPD1, Length 2,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-203ENST00000527275 ZBTB14O43829 449 aa18.48■□□□□ 0.55
SMPD1-203ENST00000527275 HNRNPCL1O60812 293 aaKnown RBP18.48■□□□□ 0.55
SMPD1-203ENST00000527275 IPO13O94829 963 aaKnown RBP18.48■□□□□ 0.55
SMPD1-203ENST00000527275 PKMP14618 531 aaKnown RBP18.48■□□□□ 0.55
SMPD1-203ENST00000527275 AKT1P31749 480 aa18.48■□□□□ 0.55
SMPD1-203ENST00000527275 VWA5B1Q5TIE3 1220 aa18.48■□□□□ 0.55
SMPD1-203ENST00000527275 PIWIL4Q7Z3Z4 852 aaKnown RBP18.48■□□□□ 0.55
SMPD1-203ENST00000527275 TRIM74Q86UV6 250 aa18.48■□□□□ 0.55
SMPD1-203ENST00000527275 DDHD1Q8NEL9 900 aa18.48■□□□□ 0.55
SMPD1-203ENST00000527275 PTCD3Q96EY7 689 aaKnown RBP18.48■□□□□ 0.55
SMPD1-203ENST00000527275 CLPBQ9H078 707 aa18.48■□□□□ 0.55
SMPD1-203ENST00000527275 LNPEPQ9UIQ6 1025 aa18.48■□□□□ 0.55
SMPD1-203ENST00000527275 PRSS21Q9Y6M0 314 aa18.48■□□□□ 0.55
SMPD1-203ENST00000527275 C10orf142B7Z368 130 aa18.48■□□□□ 0.55
SMPD1-203ENST00000527275 F8W8V4 182 aa18.48■□□□□ 0.55
SMPD1-203ENST00000527275 LATO43561 262 aa18.48■□□□□ 0.55
SMPD1-203ENST00000527275 DIAPH2O60879 1101 aa18.48■□□□□ 0.55
SMPD1-203ENST00000527275 ESR1P03372 595 aa18.48■□□□□ 0.55
SMPD1-203ENST00000527275 NSG1P42857 185 aa18.48■□□□□ 0.55
SMPD1-203ENST00000527275 ELF3P78545 371 aaPredicted RBP18.48■□□□□ 0.55
SMPD1-203ENST00000527275 DMWDQ09019 674 aa18.48■□□□□ 0.55
SMPD1-203ENST00000527275 CTSL3PQ5NE16 218 aa18.48■□□□□ 0.55
SMPD1-203ENST00000527275 PAQR3Q6TCH7 311 aa18.48■□□□□ 0.55
SMPD1-203ENST00000527275 EPGNQ6UW88 154 aa18.48■□□□□ 0.55
SMPD1-203ENST00000527275 SLC22A9Q8IVM8 553 aa18.48■□□□□ 0.55
SMPD1-203ENST00000527275 PTERQ96BW5 349 aa18.48■□□□□ 0.55
SMPD1-203ENST00000527275 CNDP1Q96KN2 507 aa18.48■□□□□ 0.55
SMPD1-203ENST00000527275 C1QTNF7Q9BXJ2 289 aa18.48■□□□□ 0.55
SMPD1-203ENST00000527275 EBF2Q9HAK2 575 aa18.48■□□□□ 0.55
SMPD1-203ENST00000527275 CYP4F12Q9HCS2 524 aa18.48■□□□□ 0.55
SMPD1-203ENST00000527275 ZDHHC2Q9UIJ5 367 aa18.48■□□□□ 0.55
SMPD1-203ENST00000527275 ABCA7Q8IZY2 2146 aa18.47■□□□□ 0.55
SMPD1-203ENST00000527275 IQCF5A8MTL0 148 aa18.47■□□□□ 0.55
SMPD1-203ENST00000527275 CAPN14A8MX76 684 aa18.47■□□□□ 0.55
SMPD1-203ENST00000527275 AXIN1O15169 862 aa18.47■□□□□ 0.55
SMPD1-203ENST00000527275 IGHV4-34P06331 123 aa18.47■□□□□ 0.55
SMPD1-203ENST00000527275 PYGLP06737 847 aa18.47■□□□□ 0.55
SMPD1-203ENST00000527275 PTPN4P29074 926 aa18.47■□□□□ 0.55
SMPD1-203ENST00000527275 SERPINB5P36952 375 aa18.47■□□□□ 0.55
SMPD1-203ENST00000527275 CYB5D1Q6P9G0 228 aa18.47■□□□□ 0.55
SMPD1-203ENST00000527275 HEATR4Q86WZ0 1026 aa18.47■□□□□ 0.55
SMPD1-203ENST00000527275 PHYKPLQ8IUZ5 450 aa18.47■□□□□ 0.55
SMPD1-203ENST00000527275 BIRC7Q96CA5 298 aa18.47■□□□□ 0.55
SMPD1-203ENST00000527275 PHF21BQ96EK2 531 aa18.47■□□□□ 0.55
SMPD1-203ENST00000527275 LGR4Q9BXB1 951 aa18.47■□□□□ 0.55
SMPD1-203ENST00000527275 SHCBP1LQ9BZQ2 653 aa18.47■□□□□ 0.55
SMPD1-203ENST00000527275 OR1A2Q9Y585 309 aa18.47■□□□□ 0.55
SMPD1-203ENST00000527275 MATN2O00339 956 aa18.47■□□□□ 0.55
SMPD1-203ENST00000527275 KRT16P08779 473 aa18.47■□□□□ 0.55
SMPD1-203ENST00000527275 ESRRAP11474 423 aaPredicted RBP18.47■□□□□ 0.55
SMPD1-203ENST00000527275 CALB2P22676 271 aa18.47■□□□□ 0.55
SMPD1-203ENST00000527275 HK2P52789 917 aa18.47■□□□□ 0.55
SMPD1-203ENST00000527275 LDLRAP1Q5SW96 308 aa18.47■□□□□ 0.55
SMPD1-203ENST00000527275 ADAMTSL4Q6UY14 1074 aa18.47■□□□□ 0.55
SMPD1-203ENST00000527275 DET1Q7L5Y6 550 aa18.47■□□□□ 0.55
SMPD1-203ENST00000527275 TMEM105Q8N8V8 129 aa18.47■□□□□ 0.55
SMPD1-203ENST00000527275 ASB12Q8WXK4 309 aa18.47■□□□□ 0.55
SMPD1-203ENST00000527275 FUBP1Q96AE4 644 aaKnown RBP18.47■□□□□ 0.55
SMPD1-203ENST00000527275 HIC2Q96JB3 615 aa18.47■□□□□ 0.55
SMPD1-203ENST00000527275 GPR21Q99679 349 aa18.47■□□□□ 0.55
SMPD1-203ENST00000527275 CCDC106Q9BWC9 280 aa18.47■□□□□ 0.55
SMPD1-203ENST00000527275 EPB41L3Q9Y2J2 1087 aaPredicted RBP18.47■□□□□ 0.55
SMPD1-203ENST00000527275 SDK1Q7Z5N4 2213 aa18.47■□□□□ 0.55
SMPD1-203ENST00000527275 NIPSNAP2O75323 286 aa18.46■□□□□ 0.55
SMPD1-203ENST00000527275 VPS26AO75436 327 aa18.46■□□□□ 0.55
SMPD1-203ENST00000527275 SNUPNO95149 360 aaKnown RBP18.46■□□□□ 0.55
SMPD1-203ENST00000527275 ATP1B2P14415 290 aaPredicted RBP18.46■□□□□ 0.55
SMPD1-203ENST00000527275 RPS3P23396 243 aaKnown RBP eCLIP18.46■□□□□ 0.55
SMPD1-203ENST00000527275 IGFALSP35858 605 aa18.46■□□□□ 0.55
SMPD1-203ENST00000527275 TRIM23P36406 574 aa18.46■□□□□ 0.55
SMPD1-203ENST00000527275 CDK3Q00526 305 aa18.46■□□□□ 0.55
SMPD1-203ENST00000527275 KIAA0895LQ68EN5 471 aa18.46■□□□□ 0.55
SMPD1-203ENST00000527275 TREML1Q86YW5 311 aa18.46■□□□□ 0.55
SMPD1-203ENST00000527275 DCUN1D1Q96GG9 259 aa18.46■□□□□ 0.55
SMPD1-203ENST00000527275 TFB2MQ9H5Q4 396 aaKnown RBP18.46■□□□□ 0.55
SMPD1-203ENST00000527275 KLC4Q9NSK0 619 aa18.46■□□□□ 0.55
SMPD1-203ENST00000527275 GALPQ9UBC7 116 aa18.46■□□□□ 0.55
SMPD1-203ENST00000527275 ZBTB32Q9Y2Y4 487 aaPredicted RBP18.46■□□□□ 0.55
SMPD1-203ENST00000527275 PCDHB1Q9Y5F3 818 aa18.46■□□□□ 0.55
SMPD1-203ENST00000527275 OAS3Q9Y6K5 1087 aaKnown RBP18.46■□□□□ 0.55
SMPD1-203ENST00000527275 H3BMM5 538 aa18.45■□□□□ 0.54
SMPD1-203ENST00000527275 HDAC3O15379 428 aa18.45■□□□□ 0.54
SMPD1-203ENST00000527275 MSH3P20585 1137 aa18.45■□□□□ 0.54
SMPD1-203ENST00000527275 CD9P21926 228 aa18.45■□□□□ 0.54
SMPD1-203ENST00000527275 TMEM115Q12893 351 aaPredicted RBP18.45■□□□□ 0.54
SMPD1-203ENST00000527275 SLC9B1Q4ZJI4 515 aa18.45■□□□□ 0.54
SMPD1-203ENST00000527275 PTRHD1Q6GMV3 140 aaKnown RBP18.45■□□□□ 0.54
SMPD1-203ENST00000527275 RHEBL1Q8TAI7 183 aa18.45■□□□□ 0.54
SMPD1-203ENST00000527275 MAPK15Q8TD08 544 aa18.45■□□□□ 0.54
SMPD1-203ENST00000527275 RAB3IPQ96QF0 476 aaPredicted RBP18.45■□□□□ 0.54
SMPD1-203ENST00000527275 WDR26Q9H7D7 661 aa18.45■□□□□ 0.54
SMPD1-203ENST00000527275 CA5BQ9Y2D0 317 aa18.45■□□□□ 0.54
SMPD1-203ENST00000527275 STK38LQ9Y2H1 464 aa18.45■□□□□ 0.54
SMPD1-203ENST00000527275 COMMD10Q9Y6G5 202 aa18.45■□□□□ 0.54
SMPD1-203ENST00000527275 VPS13AQ96RL7 3174 aa18.45■□□□□ 0.54
SMPD1-203ENST00000527275 EML5Q05BV3 1969 aa18.45■□□□□ 0.54
SMPD1-203ENST00000527275 POM121BA6NF01 834 aa18.45■□□□□ 0.54
SMPD1-203ENST00000527275 SLCO1B7G3V0H7 640 aa18.45■□□□□ 0.54
SMPD1-203ENST00000527275 SMIM24O75264 130 aa18.45■□□□□ 0.54
SMPD1-203ENST00000527275 CHRM3P20309 590 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms