RNA–Protein interactions for RNA: ENST00000527003.5

C11orf54-204, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 5

Gene C11orf54, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-204ENST00000527003 CXorf40AQ8TE69 158 aa3.8□□□□□ -1.8
C11orf54-204ENST00000527003 GANCQ8TET4 914 aa3.8□□□□□ -1.8
C11orf54-204ENST00000527003 UBLCP1Q8WVY7 318 aaPredicted RBP3.8□□□□□ -1.8
C11orf54-204ENST00000527003 ASB12Q8WXK4 309 aa3.8□□□□□ -1.8
C11orf54-204ENST00000527003 EDAQ92838 391 aa3.8□□□□□ -1.8
C11orf54-204ENST00000527003 FAM131CQ96AQ9 280 aa3.8□□□□□ -1.8
C11orf54-204ENST00000527003 ULK4Q96C45 1275 aa3.8□□□□□ -1.8
C11orf54-204ENST00000527003 MTBPQ96DY7 904 aa3.8□□□□□ -1.8
C11orf54-204ENST00000527003 SIPA1Q96FS4 1042 aa3.8□□□□□ -1.8
C11orf54-204ENST00000527003 C9orf72Q96LT7 481 aa3.8□□□□□ -1.8
C11orf54-204ENST00000527003 PLEKHG4BQ96PX9 1271 aa3.8□□□□□ -1.8
C11orf54-204ENST00000527003 CPNE1Q99829 537 aa3.8□□□□□ -1.8
C11orf54-204ENST00000527003 OMDQ99983 421 aa3.8□□□□□ -1.8
C11orf54-204ENST00000527003 APOL2Q9BQE5 337 aa3.8□□□□□ -1.8
C11orf54-204ENST00000527003 FAM126AQ9BYI3 521 aaPredicted RBP3.8□□□□□ -1.8
C11orf54-204ENST00000527003 KRTAP3-1Q9BYR8 98 aa3.8□□□□□ -1.8
C11orf54-204ENST00000527003 PCED1AQ9H1Q7 454 aa3.8□□□□□ -1.8
C11orf54-204ENST00000527003 NEUROG2Q9H2A3 272 aa3.8□□□□□ -1.8
C11orf54-204ENST00000527003 CDC42EP4Q9H3Q1 356 aaKnown RBP3.8□□□□□ -1.8
C11orf54-204ENST00000527003 MFSD1Q9H3U5 465 aa3.8□□□□□ -1.8
C11orf54-204ENST00000527003 TBC1D17Q9HA65 648 aa3.8□□□□□ -1.8
C11orf54-204ENST00000527003 SGK2Q9HBY8 427 aa3.8□□□□□ -1.8
C11orf54-204ENST00000527003 PREBQ9HCU5 417 aa3.8□□□□□ -1.8
C11orf54-204ENST00000527003 PCDH12Q9NPG4 1184 aa3.8□□□□□ -1.8
C11orf54-204ENST00000527003 PPANQ9NQ55 473 aaKnown RBP3.8□□□□□ -1.8
C11orf54-204ENST00000527003 CHRAC1Q9NRG0 131 aa3.8□□□□□ -1.8
C11orf54-204ENST00000527003 IGSF5Q9NSI5 407 aa3.8□□□□□ -1.8
C11orf54-204ENST00000527003 TREX1Q9NSU2 369 aa3.8□□□□□ -1.8
C11orf54-204ENST00000527003 C20orf96Q9NUD7 363 aaPredicted RBP3.8□□□□□ -1.8
C11orf54-204ENST00000527003 NLE1Q9NVX2 485 aaPredicted RBP3.8□□□□□ -1.8
C11orf54-204ENST00000527003 SYBUQ9NX95 663 aa3.8□□□□□ -1.8
C11orf54-204ENST00000527003 NINJ2Q9NZG7 142 aa3.8□□□□□ -1.8
C11orf54-204ENST00000527003 PKD2L2Q9NZM6 624 aa3.8□□□□□ -1.8
C11orf54-204ENST00000527003 VPS18Q9P253 973 aa3.8□□□□□ -1.8
C11orf54-204ENST00000527003 NFKBIL1Q9UBC1 381 aaPredicted RBP3.8□□□□□ -1.8
C11orf54-204ENST00000527003 TMEFF2Q9UIK5 374 aaPredicted RBP3.8□□□□□ -1.8
C11orf54-204ENST00000527003 ZNF180Q9UJW8 692 aa3.8□□□□□ -1.8
C11orf54-204ENST00000527003 CORO1CQ9ULV4 474 aaPredicted RBP3.8□□□□□ -1.8
C11orf54-204ENST00000527003 CA14Q9ULX7 337 aa3.8□□□□□ -1.8
C11orf54-204ENST00000527003 NDRG2Q9UN36 371 aaKnown RBP3.8□□□□□ -1.8
C11orf54-204ENST00000527003 CHMP2BQ9UQN3 213 aa3.8□□□□□ -1.8
C11orf54-204ENST00000527003 ZNF711Q9Y462 761 aa3.8□□□□□ -1.8
C11orf54-204ENST00000527003 ACTL7AQ9Y615 435 aa3.8□□□□□ -1.8
C11orf54-204ENST00000527003 SPTBN5Q9NRC6 3674 aaKnown RBP3.8□□□□□ -1.8
C11orf54-204ENST00000527003 C2orf16Q68DN1 1984 aa3.8□□□□□ -1.8
C11orf54-204ENST00000527003 DOCK4Q8N1I0 1966 aa3.8□□□□□ -1.8
C11orf54-204ENST00000527003 ATG2AQ2TAZ0 1938 aa3.8□□□□□ -1.8
C11orf54-204ENST00000527003 XIRP2A4UGR9 3374 aa3.79□□□□□ -1.8
C11orf54-204ENST00000527003 NUP205Q92621 2012 aa3.79□□□□□ -1.8
C11orf54-204ENST00000527003 IQANK1A0A1B0GTG1 560 aa3.79□□□□□ -1.8
C11orf54-204ENST00000527003 ZCWPW2A0A1B0GU75 182 aa3.79□□□□□ -1.8
C11orf54-204ENST00000527003 EXOC1LA0A1B0GW35 172 aa3.79□□□□□ -1.8
C11orf54-204ENST00000527003 TCRBV21S2A2A0A5A6 115 aa3.79□□□□□ -1.8
C11orf54-204ENST00000527003 KLHL33A6NCF5 533 aa3.79□□□□□ -1.8
C11orf54-204ENST00000527003 FAM159BA6NKW6 160 aa3.79□□□□□ -1.8
C11orf54-204ENST00000527003 SHISA7A6NL88 538 aa3.79□□□□□ -1.8
C11orf54-204ENST00000527003 GPR89AB7ZAQ6 455 aa3.79□□□□□ -1.8
C11orf54-204ENST00000527003 H3BMM5 538 aa3.79□□□□□ -1.8
C11orf54-204ENST00000527003 QSOX1O00391 747 aa3.79□□□□□ -1.8
C11orf54-204ENST00000527003 TOR1BO14657 336 aa3.79□□□□□ -1.8
C11orf54-204ENST00000527003 RASGRF2O14827 1237 aa3.79□□□□□ -1.8
C11orf54-204ENST00000527003 WNT9AO14904 365 aa3.79□□□□□ -1.8
C11orf54-204ENST00000527003 PLRG1O43660 514 aaKnown RBP3.79□□□□□ -1.8
C11orf54-204ENST00000527003 NPHS1O60500 1241 aa3.79□□□□□ -1.8
C11orf54-204ENST00000527003 CDH16O75309 829 aa3.79□□□□□ -1.8
C11orf54-204ENST00000527003 GJB3O75712 270 aa3.79□□□□□ -1.8
C11orf54-204ENST00000527003 RNASEH2AO75792 299 aaKnown RBP3.79□□□□□ -1.8
C11orf54-204ENST00000527003 VAPBO95292 243 aa3.79□□□□□ -1.8
C11orf54-204ENST00000527003 IGLV3-19P01714 112 aa3.79□□□□□ -1.8
C11orf54-204ENST00000527003 SLPIP03973 132 aa3.79□□□□□ -1.8
C11orf54-204ENST00000527003 FUCA1P04066 466 aa3.79□□□□□ -1.8
C11orf54-204ENST00000527003 NTRK1P04629 796 aa3.79□□□□□ -1.8
C11orf54-204ENST00000527003 INHBAP08476 426 aa3.79□□□□□ -1.8
C11orf54-204ENST00000527003 ELFN1P0C7U0 828 aa3.79□□□□□ -1.8
C11orf54-204ENST00000527003 GPR89BP0CG08 455 aa3.79□□□□□ -1.8
C11orf54-204ENST00000527003 RALBP11234 206 aa3.79□□□□□ -1.8
C11orf54-204ENST00000527003 NAT2P11245 290 aa3.79□□□□□ -1.8
C11orf54-204ENST00000527003 ITGALP20701 1170 aa3.79□□□□□ -1.8
C11orf54-204ENST00000527003 OGNP20774 298 aaKnown RBP3.79□□□□□ -1.8
C11orf54-204ENST00000527003 TEAD1P28347 426 aa3.79□□□□□ -1.8
C11orf54-204ENST00000527003 PMLP29590 882 aa3.79□□□□□ -1.8
C11orf54-204ENST00000527003 SSTR1P30872 391 aa3.79□□□□□ -1.8
C11orf54-204ENST00000527003 GKP32189 559 aa3.79□□□□□ -1.8
C11orf54-204ENST00000527003 SPRP35270 261 aaPredicted RBP3.79□□□□□ -1.8
C11orf54-204ENST00000527003 SPAM1P38567 509 aa3.79□□□□□ -1.8
C11orf54-204ENST00000527003 MMP12P39900 470 aa3.79□□□□□ -1.8
C11orf54-204ENST00000527003 GP5P40197 560 aa3.79□□□□□ -1.8
C11orf54-204ENST00000527003 P2RY2P41231 377 aa3.79□□□□□ -1.8
C11orf54-204ENST00000527003 ECI1P42126 302 aa3.79□□□□□ -1.8
C11orf54-204ENST00000527003 PTGER3P43115 390 aa3.79□□□□□ -1.8
C11orf54-204ENST00000527003 CXCL12P48061 93 aa3.79□□□□□ -1.8
C11orf54-204ENST00000527003 ARCN1P48444 511 aaKnown RBP3.79□□□□□ -1.8
C11orf54-204ENST00000527003 PSMD8P48556 350 aa3.79□□□□□ -1.8
C11orf54-204ENST00000527003 SPINT3P49223 89 aa3.79□□□□□ -1.8
C11orf54-204ENST00000527003 TTPAP49638 278 aa3.79□□□□□ -1.8
C11orf54-204ENST00000527003 NUMBP49757 651 aa3.79□□□□□ -1.8
C11orf54-204ENST00000527003 STC1P52823 247 aa3.79□□□□□ -1.8
C11orf54-204ENST00000527003 COPAP53621 1224 aa3.79□□□□□ -1.8
C11orf54-204ENST00000527003 CSE1LP55060 971 aaKnown RBP3.79□□□□□ -1.8
C11orf54-204ENST00000527003 ADARP55265 1226 aaKnown RBP3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms