RNA–Protein interactions for RNA: ENST00000526869.1

SMCO4-203, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

TSL 1 (best)

Gene SMCO4, Length 374 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-203ENST00000526869 SLC17A9Q9BYT1 436 aa20.13■□□□□ 0.81
SMCO4-203ENST00000526869 OR2AG1Q9H205 316 aa20.13■□□□□ 0.81
SMCO4-203ENST00000526869 ABCF3Q9NUQ8 709 aa20.13■□□□□ 0.81
SMCO4-203ENST00000526869 ATXN10Q9UBB4 475 aa20.13■□□□□ 0.81
SMCO4-203ENST00000526869 WNT16Q9UBV4 365 aa20.13■□□□□ 0.81
SMCO4-203ENST00000526869 APOBEC2Q9Y235 224 aaKnown RBP20.13■□□□□ 0.81
SMCO4-203ENST00000526869 LIN7AO14910 233 aaPredicted RBP20.12■□□□□ 0.81
SMCO4-203ENST00000526869 HDAC3O15379 428 aa20.12■□□□□ 0.81
SMCO4-203ENST00000526869 FFAR2O15552 330 aa20.12■□□□□ 0.81
SMCO4-203ENST00000526869 IGLV3-19P01714 112 aa20.12■□□□□ 0.81
SMCO4-203ENST00000526869 PCCBP05166 539 aa20.12■□□□□ 0.81
SMCO4-203ENST00000526869 VCLP18206 1134 aa20.12■□□□□ 0.81
SMCO4-203ENST00000526869 GABRG2P18507 467 aa20.12■□□□□ 0.81
SMCO4-203ENST00000526869 CD72P21854 359 aa20.12■□□□□ 0.81
SMCO4-203ENST00000526869 EEF1DP29692 281 aaKnown RBP20.12■□□□□ 0.81
SMCO4-203ENST00000526869 CCR10P46092 362 aa20.12■□□□□ 0.81
SMCO4-203ENST00000526869 HNRNPH2P55795 449 aaKnown RBP20.12■□□□□ 0.81
SMCO4-203ENST00000526869 ZP2Q05996 745 aa20.12■□□□□ 0.81
SMCO4-203ENST00000526869 FGL2Q14314 439 aa20.12■□□□□ 0.81
SMCO4-203ENST00000526869 IRF4Q15306 451 aa20.12■□□□□ 0.81
SMCO4-203ENST00000526869 PCBP2Q15366 365 aaKnown RBP eCLIP20.12■□□□□ 0.81
SMCO4-203ENST00000526869 SYTL3Q4VX76 610 aa20.12■□□□□ 0.81
SMCO4-203ENST00000526869 SULT1C3Q6IMI6 304 aa20.12■□□□□ 0.81
SMCO4-203ENST00000526869 SYT13Q7L8C5 426 aa20.12■□□□□ 0.81
SMCO4-203ENST00000526869 TRIM74Q86UV6 250 aa20.12■□□□□ 0.81
SMCO4-203ENST00000526869 TRIM69Q86WT6 500 aa20.12■□□□□ 0.81
SMCO4-203ENST00000526869 DENND6BQ8NEG7 585 aa20.12■□□□□ 0.81
SMCO4-203ENST00000526869 ASB11Q8WXH4 323 aa20.12■□□□□ 0.81
SMCO4-203ENST00000526869 SKA1Q96BD8 255 aa20.12■□□□□ 0.81
SMCO4-203ENST00000526869 LRRC37BQ96QE4 947 aa20.12■□□□□ 0.81
SMCO4-203ENST00000526869 WDR26Q9H7D7 661 aa20.12■□□□□ 0.81
SMCO4-203ENST00000526869 COG4Q9H9E3 785 aa20.12■□□□□ 0.81
SMCO4-203ENST00000526869 ZDHHC2Q9UIJ5 367 aa20.12■□□□□ 0.81
SMCO4-203ENST00000526869 ADAMTS6Q9UKP5 1117 aa20.12■□□□□ 0.81
SMCO4-203ENST00000526869 DNMT3AQ9Y6K1 912 aaPredicted RBP20.12■□□□□ 0.81
SMCO4-203ENST00000526869 ATG2BQ96BY7 2078 aa20.12■□□□□ 0.81
SMCO4-203ENST00000526869 TRPM6Q9BX84 2022 aa20.12■□□□□ 0.81
SMCO4-203ENST00000526869 KLHL33A6NCF5 533 aa20.11■□□□□ 0.81
SMCO4-203ENST00000526869 GFYI3L273 518 aa20.11■□□□□ 0.81
SMCO4-203ENST00000526869 CHUKO15111 745 aa20.11■□□□□ 0.81
SMCO4-203ENST00000526869 SIX3O95343 332 aaPredicted RBP20.11■□□□□ 0.81
SMCO4-203ENST00000526869 STARD6P59095 220 aa20.11■□□□□ 0.81
SMCO4-203ENST00000526869 TFF2Q03403 129 aa20.11■□□□□ 0.81
SMCO4-203ENST00000526869 LCP2Q13094 533 aa20.11■□□□□ 0.81
SMCO4-203ENST00000526869 LACTB2Q53H82 288 aaPredicted RBP20.11■□□□□ 0.81
SMCO4-203ENST00000526869 EPGNQ6UW88 154 aa20.11■□□□□ 0.81
SMCO4-203ENST00000526869 MAVSQ7Z434 540 aa20.11■□□□□ 0.81
SMCO4-203ENST00000526869 CUZD1Q86UP6 607 aa20.11■□□□□ 0.81
SMCO4-203ENST00000526869 TCAIMQ8N3R3 496 aa20.11■□□□□ 0.81
SMCO4-203ENST00000526869 BEND7Q8N7W2 519 aaPredicted RBP20.11■□□□□ 0.81
SMCO4-203ENST00000526869 OR2T34Q8NGX1 318 aa20.11■□□□□ 0.81
SMCO4-203ENST00000526869 TMEM159Q96B96 161 aa20.11■□□□□ 0.81
SMCO4-203ENST00000526869 MOCOSQ96EN8 888 aa20.11■□□□□ 0.81
SMCO4-203ENST00000526869 LENG8Q96PV6 779 aaPredicted RBP20.11■□□□□ 0.81
SMCO4-203ENST00000526869 NELL2Q99435 816 aa20.11■□□□□ 0.81
SMCO4-203ENST00000526869 TRIM54Q9BYV2 358 aa20.11■□□□□ 0.81
SMCO4-203ENST00000526869 PARVBQ9HBI1 364 aa20.11■□□□□ 0.81
SMCO4-203ENST00000526869 SGK2Q9HBY8 427 aa20.11■□□□□ 0.81
SMCO4-203ENST00000526869 ITM2CQ9NQX7 267 aa20.11■□□□□ 0.81
SMCO4-203ENST00000526869 ACSS2Q9NR19 701 aa20.11■□□□□ 0.81
SMCO4-203ENST00000526869 PHPT1Q9NRX4 125 aaPredicted RBP20.11■□□□□ 0.81
SMCO4-203ENST00000526869 USP36Q9P275 1121 aaKnown RBP20.11■□□□□ 0.81
SMCO4-203ENST00000526869 HEY2Q9UBP5 337 aa20.11■□□□□ 0.81
SMCO4-203ENST00000526869 PTBP2Q9UKA9 531 aaKnown RBP20.11■□□□□ 0.81
SMCO4-203ENST00000526869 PCTPQ9UKL6 214 aa20.11■□□□□ 0.81
SMCO4-203ENST00000526869 CA14Q9ULX7 337 aa20.11■□□□□ 0.81
SMCO4-203ENST00000526869 STK38LQ9Y2H1 464 aa20.11■□□□□ 0.81
SMCO4-203ENST00000526869 TBC1D3DA0A087WVF3 549 aa20.1■□□□□ 0.81
SMCO4-203ENST00000526869 TBC1D3IA0A087WXS9 549 aa20.1■□□□□ 0.81
SMCO4-203ENST00000526869 TBC1D3EA0A087X179 549 aa20.1■□□□□ 0.81
SMCO4-203ENST00000526869 TBC1D3KA0A087X1G2 549 aa20.1■□□□□ 0.81
SMCO4-203ENST00000526869 TBC1D3FA6NER0 549 aaPredicted RBP20.1■□□□□ 0.81
SMCO4-203ENST00000526869 LRRC72A6NJI9 287 aa20.1■□□□□ 0.81
SMCO4-203ENST00000526869 TBC1D3LB9A6J9 549 aa20.1■□□□□ 0.81
SMCO4-203ENST00000526869 GRID2O43424 1007 aa20.1■□□□□ 0.81
SMCO4-203ENST00000526869 MATN4O95460 622 aa20.1■□□□□ 0.81
SMCO4-203ENST00000526869 MLYCDO95822 493 aa20.1■□□□□ 0.81
SMCO4-203ENST00000526869 FGF4P08620 206 aa20.1■□□□□ 0.81
SMCO4-203ENST00000526869 TBC1D3HP0C7X1 549 aa20.1■□□□□ 0.81
SMCO4-203ENST00000526869 ZNF8P17098 575 aaPredicted RBP20.1■□□□□ 0.81
SMCO4-203ENST00000526869 TARSP26639 723 aaKnown RBP20.1■□□□□ 0.81
SMCO4-203ENST00000526869 IDH3AP50213 366 aa20.1■□□□□ 0.81
SMCO4-203ENST00000526869 TPMTP51580 245 aa20.1■□□□□ 0.81
SMCO4-203ENST00000526869 AP1S2P56377 157 aa20.1■□□□□ 0.81
SMCO4-203ENST00000526869 PHKG1Q16816 387 aa20.1■□□□□ 0.81
SMCO4-203ENST00000526869 FAM91A1Q658Y4 838 aa20.1■□□□□ 0.81
SMCO4-203ENST00000526869 TBC1D3GQ6DHY5 549 aa20.1■□□□□ 0.81
SMCO4-203ENST00000526869 TBC1D3CQ6IPX1 549 aa20.1■□□□□ 0.81
SMCO4-203ENST00000526869 UBE2R2Q712K3 238 aaPredicted RBP20.1■□□□□ 0.81
SMCO4-203ENST00000526869 TRAPPC5Q8IUR0 188 aa20.1■□□□□ 0.81
SMCO4-203ENST00000526869 VRK3Q8IV63 474 aa20.1■□□□□ 0.81
SMCO4-203ENST00000526869 SLC22A15Q8IZD6 547 aa20.1■□□□□ 0.81
SMCO4-203ENST00000526869 TBC1D3Q8IZP1 549 aaPredicted RBP20.1■□□□□ 0.81
SMCO4-203ENST00000526869 FITM2Q8N6M3 262 aa20.1■□□□□ 0.81
SMCO4-203ENST00000526869 HM13Q8TCT9 377 aa20.1■□□□□ 0.81
SMCO4-203ENST00000526869 DLG3Q92796 817 aa20.1■□□□□ 0.81
SMCO4-203ENST00000526869 OSBPL6Q9BZF3 934 aa20.1■□□□□ 0.81
SMCO4-203ENST00000526869 MBNL1Q9NR56 388 aaKnown RBP20.1■□□□□ 0.81
SMCO4-203ENST00000526869 TSR3Q9UJK0 312 aaKnown RBP20.1■□□□□ 0.81
SMCO4-203ENST00000526869 NCF1BA6NI72 391 aaPredicted RBP20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms