RNA–Protein interactions for RNA: ENST00000526704.6

LINC01001-201, Transcript of long intergenic non-protein coding RNA 1001, humanhuman

TSL 5 BASIC

Gene LINC01001, Length 2,553 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01001-201ENST00000526704 CKBP12277 381 aa11.48□□□□□ -0.57
LINC01001-201ENST00000526704 PTGER3P43115 390 aa11.48□□□□□ -0.57
LINC01001-201ENST00000526704 PLIN5Q00G26 463 aa11.48□□□□□ -0.57
LINC01001-201ENST00000526704 GRSF1Q12849 480 aaKnown RBP eCLIP11.48□□□□□ -0.57
LINC01001-201ENST00000526704 CRHR2Q13324 411 aa11.48□□□□□ -0.57
LINC01001-201ENST00000526704 NKG7Q16617 165 aa11.48□□□□□ -0.57
LINC01001-201ENST00000526704 RFTN2Q52LD8 501 aaPredicted RBP11.48□□□□□ -0.57
LINC01001-201ENST00000526704 FRA10AC1Q70Z53 315 aa11.48□□□□□ -0.57
LINC01001-201ENST00000526704 TAS2R42Q7RTR8 314 aa11.48□□□□□ -0.57
LINC01001-201ENST00000526704 DENND1CQ8IV53 801 aa11.48□□□□□ -0.57
LINC01001-201ENST00000526704 OR8J3Q8NGG0 315 aa11.48□□□□□ -0.57
LINC01001-201ENST00000526704 CNDP2Q96KP4 475 aaKnown RBP11.48□□□□□ -0.57
LINC01001-201ENST00000526704 FANCEQ9HB96 536 aa11.48□□□□□ -0.57
LINC01001-201ENST00000526704 MARCH5Q9NX47 278 aa11.48□□□□□ -0.57
LINC01001-201ENST00000526704 SMPD4Q9NXE4 827 aa11.48□□□□□ -0.57
LINC01001-201ENST00000526704 VAPAQ9P0L0 249 aa11.48□□□□□ -0.57
LINC01001-201ENST00000526704 TMEM9Q9P0T7 183 aa11.48□□□□□ -0.57
LINC01001-201ENST00000526704 EVLQ9UI08 416 aaPredicted RBP11.48□□□□□ -0.57
LINC01001-201ENST00000526704 DNMT3LQ9UJW3 386 aa11.48□□□□□ -0.57
LINC01001-201ENST00000526704 CCL27Q9Y4X3 112 aa11.48□□□□□ -0.57
LINC01001-201ENST00000526704 ILVBLA1L0T0 632 aa11.47□□□□□ -0.57
LINC01001-201ENST00000526704 IFRD1O00458 451 aaPredicted RBP11.47□□□□□ -0.57
LINC01001-201ENST00000526704 KATNA1O75449 491 aa11.47□□□□□ -0.57
LINC01001-201ENST00000526704 CLDN11O75508 207 aa11.47□□□□□ -0.57
LINC01001-201ENST00000526704 INHBBP09529 407 aa11.47□□□□□ -0.57
LINC01001-201ENST00000526704 JUNBP17275 347 aaPredicted RBP11.47□□□□□ -0.57
LINC01001-201ENST00000526704 MATN1P21941 496 aa11.47□□□□□ -0.57
LINC01001-201ENST00000526704 NFKBIAP25963 317 aa11.47□□□□□ -0.57
LINC01001-201ENST00000526704 CCND3P30281 292 aaPredicted RBP11.47□□□□□ -0.57
LINC01001-201ENST00000526704 MTHFRP42898 656 aa11.47□□□□□ -0.57
LINC01001-201ENST00000526704 SLC11A2P49281 568 aa11.47□□□□□ -0.57
LINC01001-201ENST00000526704 ZNF157P51786 506 aaPredicted RBP11.47□□□□□ -0.57
LINC01001-201ENST00000526704 ARF5P84085 180 aa11.47□□□□□ -0.57
LINC01001-201ENST00000526704 CBX2Q14781 532 aaPredicted RBP11.47□□□□□ -0.57
LINC01001-201ENST00000526704 AP5B1Q2VPB7 878 aa11.47□□□□□ -0.57
LINC01001-201ENST00000526704 FAM98BQ52LJ0 330 aaKnown RBP11.47□□□□□ -0.57
LINC01001-201ENST00000526704 XAF1Q6GPH4 301 aa11.47□□□□□ -0.57
LINC01001-201ENST00000526704 ENPP6Q6UWR7 440 aa11.47□□□□□ -0.57
LINC01001-201ENST00000526704 THAP11Q96EK4 314 aa11.47□□□□□ -0.57
LINC01001-201ENST00000526704 PDLIM5Q96HC4 596 aaKnown RBP11.47□□□□□ -0.57
LINC01001-201ENST00000526704 C17orf80Q9BSJ5 609 aa11.47□□□□□ -0.57
LINC01001-201ENST00000526704 ADGRE3Q9BY15 652 aa11.47□□□□□ -0.57
LINC01001-201ENST00000526704 RETREG1Q9H6L5 497 aa11.47□□□□□ -0.57
LINC01001-201ENST00000526704 HCSTQ9UBK5 93 aa11.47□□□□□ -0.57
LINC01001-201ENST00000526704 DHRS7Q9Y394 339 aa11.47□□□□□ -0.57
LINC01001-201ENST00000526704 PLXNB3Q9ULL4 1909 aa11.47□□□□□ -0.57
LINC01001-201ENST00000526704 CD160O95971 181 aa11.47□□□□□ -0.57
LINC01001-201ENST00000526704 HPRP00739 348 aa11.47□□□□□ -0.57
LINC01001-201ENST00000526704 MBL2P11226 248 aaPredicted RBP11.47□□□□□ -0.57
LINC01001-201ENST00000526704 ATP5C1P36542 298 aaKnown RBP11.47□□□□□ -0.57
LINC01001-201ENST00000526704 RPL38P63173 70 aaKnown RBP11.47□□□□□ -0.57
LINC01001-201ENST00000526704 PTGR1Q14914 329 aa11.47□□□□□ -0.57
LINC01001-201ENST00000526704 RTP2Q5QGT7 225 aa11.47□□□□□ -0.57
LINC01001-201ENST00000526704 ADAMTSL2Q86TH1 951 aa11.47□□□□□ -0.57
LINC01001-201ENST00000526704 STK32CQ86UX6 486 aa11.47□□□□□ -0.57
LINC01001-201ENST00000526704 SMYD1Q8NB12 490 aa11.47□□□□□ -0.57
LINC01001-201ENST00000526704 ZNF548Q8NEK5 533 aaPredicted RBP11.47□□□□□ -0.57
LINC01001-201ENST00000526704 TTLL2Q9BWV7 592 aa11.47□□□□□ -0.57
LINC01001-201ENST00000526704 TOR3AQ9H497 397 aa11.47□□□□□ -0.57
LINC01001-201ENST00000526704 IKZF5Q9H5V7 419 aa11.47□□□□□ -0.57
LINC01001-201ENST00000526704 FAIMQ9NVQ4 179 aa11.47□□□□□ -0.57
LINC01001-201ENST00000526704 ELOVL2Q9NXB9 296 aa11.47□□□□□ -0.57
LINC01001-201ENST00000526704 FFAR2O15552 330 aa11.46□□□□□ -0.57
LINC01001-201ENST00000526704 TBC1D4O60343 1298 aa11.46□□□□□ -0.57
LINC01001-201ENST00000526704 SEC14L2O76054 403 aa11.46□□□□□ -0.57
LINC01001-201ENST00000526704 KCNH1O95259 989 aa11.46□□□□□ -0.57
LINC01001-201ENST00000526704 PRAMEF12O95522 483 aa11.46□□□□□ -0.57
LINC01001-201ENST00000526704 KLKB1P03952 638 aa11.46□□□□□ -0.57
LINC01001-201ENST00000526704 IL7RP16871 459 aa11.46□□□□□ -0.57
LINC01001-201ENST00000526704 MAPK10P53779 464 aa11.46□□□□□ -0.57
LINC01001-201ENST00000526704 IST1P53990 364 aa11.46□□□□□ -0.57
LINC01001-201ENST00000526704 CHRNB3Q05901 458 aa11.46□□□□□ -0.57
LINC01001-201ENST00000526704 NFATC3Q12968 1075 aa11.46□□□□□ -0.57
LINC01001-201ENST00000526704 BNIP3Q12983 259 aa11.46□□□□□ -0.57
LINC01001-201ENST00000526704 ANKRD26P1Q6NSI1 321 aa11.46□□□□□ -0.57
LINC01001-201ENST00000526704 XKR5Q6UX68 686 aa11.46□□□□□ -0.57
LINC01001-201ENST00000526704 LINGO4Q6UY18 593 aa11.46□□□□□ -0.57
LINC01001-201ENST00000526704 CLEC4FQ8N1N0 589 aa11.46□□□□□ -0.57
LINC01001-201ENST00000526704 SLC22A17Q8WUG5 538 aa11.46□□□□□ -0.57
LINC01001-201ENST00000526704 SLC13A3Q8WWT9 602 aa11.46□□□□□ -0.57
LINC01001-201ENST00000526704 SNX19Q92543 992 aa11.46□□□□□ -0.57
LINC01001-201ENST00000526704 FIG4Q92562 907 aa11.46□□□□□ -0.57
LINC01001-201ENST00000526704 SGCDQ92629 289 aa11.46□□□□□ -0.57
LINC01001-201ENST00000526704 ACDQ96AP0 544 aa11.46□□□□□ -0.57
LINC01001-201ENST00000526704 EID2BQ96D98 161 aa11.46□□□□□ -0.57
LINC01001-201ENST00000526704 MBOAT4Q96T53 435 aa11.46□□□□□ -0.57
LINC01001-201ENST00000526704 NSUN3Q9H649 340 aaKnown RBP11.46□□□□□ -0.57
LINC01001-201ENST00000526704 IPPKQ9H8X2 491 aa11.46□□□□□ -0.57
LINC01001-201ENST00000526704 UTS2RQ9UKP6 389 aa11.46□□□□□ -0.57
LINC01001-201ENST00000526704 TNPO3Q9Y5L0 923 aaKnown RBP11.46□□□□□ -0.57
LINC01001-201ENST00000526704 TAPBPO15533 448 aa11.46□□□□□ -0.58
LINC01001-201ENST00000526704 OTCP00480 354 aa11.46□□□□□ -0.58
LINC01001-201ENST00000526704 TFPTP0C1Z6 253 aa11.46□□□□□ -0.58
LINC01001-201ENST00000526704 EEF1B2P24534 225 aaKnown RBP11.46□□□□□ -0.58
LINC01001-201ENST00000526704 CA5AP35218 305 aa11.46□□□□□ -0.58
LINC01001-201ENST00000526704 HSPA7P48741 367 aa11.46□□□□□ -0.58
LINC01001-201ENST00000526704 GATMP50440 423 aa11.46□□□□□ -0.58
LINC01001-201ENST00000526704 CACNG1Q06432 222 aa11.46□□□□□ -0.58
LINC01001-201ENST00000526704 BROXQ5VW32 411 aa11.46□□□□□ -0.58
LINC01001-201ENST00000526704 RNF219Q5W0B1 726 aaPredicted RBP11.46□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms