RNA–Protein interactions for RNA: ENST00000525688.5

CD44-220, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 560 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-220ENST00000525688 CPT2P23786 658 aa4.74□□□□□ -1.65
CD44-220ENST00000525688 MCM3P25205 808 aa4.74□□□□□ -1.65
CD44-220ENST00000525688 EPHB2P29323 1055 aa4.74□□□□□ -1.65
CD44-220ENST00000525688 MPGP29372 298 aa4.74□□□□□ -1.65
CD44-220ENST00000525688 HOXA13P31271 388 aaPredicted RBP4.74□□□□□ -1.65
CD44-220ENST00000525688 SHMT1P34896 483 aa4.74□□□□□ -1.65
CD44-220ENST00000525688 SOX6P35712 828 aa4.74□□□□□ -1.65
CD44-220ENST00000525688 ZNF81P51508 661 aa4.74□□□□□ -1.65
CD44-220ENST00000525688 ACTR1AP61163 376 aa4.74□□□□□ -1.65
CD44-220ENST00000525688 ZNF91Q05481 1191 aa4.74□□□□□ -1.65
CD44-220ENST00000525688 RUNX1T1Q06455 604 aa4.74□□□□□ -1.65
CD44-220ENST00000525688 SLC20A2Q08357 652 aa4.74□□□□□ -1.65
CD44-220ENST00000525688 FAM27E3Q08E93 113 aa4.74□□□□□ -1.65
CD44-220ENST00000525688 CETN1Q12798 172 aa4.74□□□□□ -1.65
CD44-220ENST00000525688 CUL2Q13617 745 aa4.74□□□□□ -1.65
CD44-220ENST00000525688 MXD4Q14582 209 aaPredicted RBP4.74□□□□□ -1.65
CD44-220ENST00000525688 DRAP1Q14919 205 aaPredicted RBP4.74□□□□□ -1.65
CD44-220ENST00000525688 NTRK2Q16620 822 aa4.74□□□□□ -1.65
CD44-220ENST00000525688 TCTN1Q2MV58 587 aa4.74□□□□□ -1.65
CD44-220ENST00000525688 ZRANB3Q5FWF4 1079 aa4.74□□□□□ -1.65
CD44-220ENST00000525688 C12orf60Q5U649 245 aa4.74□□□□□ -1.65
CD44-220ENST00000525688 GKAP1Q5VSY0 366 aaPredicted RBP4.74□□□□□ -1.65
CD44-220ENST00000525688 TAF3Q5VWG9 929 aa4.74□□□□□ -1.65
CD44-220ENST00000525688 GLDNQ6ZMI3 551 aaPredicted RBP4.74□□□□□ -1.65
CD44-220ENST00000525688 DNAAF5Q86Y56 855 aa4.74□□□□□ -1.65
CD44-220ENST00000525688 KRTAP1-3Q8IUG1 177 aa4.74□□□□□ -1.65
CD44-220ENST00000525688 LINC00346Q8IVM7 164 aa4.74□□□□□ -1.65
CD44-220ENST00000525688 DENND6AQ8IWF6 608 aa4.74□□□□□ -1.65
CD44-220ENST00000525688 SYT2Q8N9I0 419 aaPredicted RBP4.74□□□□□ -1.65
CD44-220ENST00000525688 GJC3Q8NFK1 279 aa4.74□□□□□ -1.65
CD44-220ENST00000525688 OR56B2PQ8NGI1 322 aa4.74□□□□□ -1.65
CD44-220ENST00000525688 ARHGEF26Q96DR7 871 aa4.74□□□□□ -1.65
CD44-220ENST00000525688 FAM81BQ96LP2 452 aa4.74□□□□□ -1.65
CD44-220ENST00000525688 TMEM68Q96MH6 324 aa4.74□□□□□ -1.65
CD44-220ENST00000525688 ZNF396Q96N95 335 aaPredicted RBP4.74□□□□□ -1.65
CD44-220ENST00000525688 SLITRK1Q96PX8 696 aa4.74□□□□□ -1.65
CD44-220ENST00000525688 MXRA8Q9BRK3 442 aa4.74□□□□□ -1.65
CD44-220ENST00000525688 LZTS2Q9BRK4 669 aa4.74□□□□□ -1.65
CD44-220ENST00000525688 NUF2Q9BZD4 464 aa4.74□□□□□ -1.65
CD44-220ENST00000525688 SLC7A5P2Q9GIP4 190 aa4.74□□□□□ -1.65
CD44-220ENST00000525688 PRSS22Q9GZN4 317 aa4.74□□□□□ -1.65
CD44-220ENST00000525688 NYXQ9GZU5 481 aa4.74□□□□□ -1.65
CD44-220ENST00000525688 ISCUQ9H1K1 167 aa4.74□□□□□ -1.65
CD44-220ENST00000525688 CLSTN2Q9H4D0 955 aa4.74□□□□□ -1.65
CD44-220ENST00000525688 PANK3Q9H999 370 aa4.74□□□□□ -1.65
CD44-220ENST00000525688 KIF9Q9HAQ2 790 aa4.74□□□□□ -1.65
CD44-220ENST00000525688 C17orf75Q9HAS0 396 aa4.74□□□□□ -1.65
CD44-220ENST00000525688 CRLF2Q9HC73 371 aa4.74□□□□□ -1.65
CD44-220ENST00000525688 LTB4R2Q9NPC1 389 aa4.74□□□□□ -1.65
CD44-220ENST00000525688 SLC35D1Q9NTN3 355 aa4.74□□□□□ -1.65
CD44-220ENST00000525688 GIMAP4Q9NUV9 329 aa4.74□□□□□ -1.65
CD44-220ENST00000525688 NMRK1Q9NWW6 199 aa4.74□□□□□ -1.65
CD44-220ENST00000525688 MSRB1Q9NZV6 116 aa4.74□□□□□ -1.65
CD44-220ENST00000525688 COX16Q9P0S2 106 aa4.74□□□□□ -1.65
CD44-220ENST00000525688 FETUBQ9UGM5 382 aa4.74□□□□□ -1.65
CD44-220ENST00000525688 APPL1Q9UKG1 709 aa4.74□□□□□ -1.65
CD44-220ENST00000525688 GRID1Q9ULK0 1009 aa4.74□□□□□ -1.65
CD44-220ENST00000525688 BTBD3Q9Y2F9 522 aa4.74□□□□□ -1.65
CD44-220ENST00000525688 WDR37Q9Y2I8 494 aa4.74□□□□□ -1.65
CD44-220ENST00000525688 PCDHGA5Q9Y5G8 931 aa4.74□□□□□ -1.65
CD44-220ENST00000525688 PCDHGA1Q9Y5H4 931 aa4.74□□□□□ -1.65
CD44-220ENST00000525688 A3GALT2U3KPV4 340 aa4.74□□□□□ -1.65
CD44-220ENST00000525688 KDRP35968 1356 aa4.74□□□□□ -1.65
CD44-220ENST00000525688 CGNL1Q0VF96 1302 aa4.73□□□□□ -1.65
CD44-220ENST00000525688 CRB1P82279 1406 aa4.73□□□□□ -1.65
CD44-220ENST00000525688 ZNF814B7Z6K7 855 aa4.73□□□□□ -1.65
CD44-220ENST00000525688 VWA5AO00534 786 aa4.73□□□□□ -1.65
CD44-220ENST00000525688 MAGEB3O15480 346 aa4.73□□□□□ -1.65
CD44-220ENST00000525688 NDUFS3O75489 264 aa4.73□□□□□ -1.65
CD44-220ENST00000525688 CLDN7O95471 211 aa4.73□□□□□ -1.65
CD44-220ENST00000525688 KLKB1P03952 638 aa4.73□□□□□ -1.65
CD44-220ENST00000525688 TNFRSF8P28908 595 aa4.73□□□□□ -1.65
CD44-220ENST00000525688 DCTDP32321 178 aa4.73□□□□□ -1.65
CD44-220ENST00000525688 RABIFP47224 123 aa4.73□□□□□ -1.65
CD44-220ENST00000525688 ARCN1P48444 511 aaKnown RBP4.73□□□□□ -1.65
CD44-220ENST00000525688 CAPSQ13938 189 aa4.73□□□□□ -1.65
CD44-220ENST00000525688 LPIN1Q14693 890 aa4.73□□□□□ -1.65
CD44-220ENST00000525688 SOWAHAQ2M3V2 549 aa4.73□□□□□ -1.65
CD44-220ENST00000525688 COL28A1Q2UY09 1125 aa4.73□□□□□ -1.65
CD44-220ENST00000525688 USP41Q3LFD5 358 aa4.73□□□□□ -1.65
CD44-220ENST00000525688 ESCO2Q56NI9 601 aa4.73□□□□□ -1.65
CD44-220ENST00000525688 SGO1Q5FBB7 561 aa4.73□□□□□ -1.65
CD44-220ENST00000525688 NHSL2Q5HYW2 709 aa4.73□□□□□ -1.65
CD44-220ENST00000525688 C6orf141Q5SZD1 244 aa4.73□□□□□ -1.65
CD44-220ENST00000525688 CES4AQ5XG92 561 aa4.73□□□□□ -1.65
CD44-220ENST00000525688 PLEKHA7Q6IQ23 1121 aa4.73□□□□□ -1.65
CD44-220ENST00000525688 HEPHL1Q6MZM0 1159 aa4.73□□□□□ -1.65
CD44-220ENST00000525688 LRRC8EQ6NSJ5 796 aa4.73□□□□□ -1.65
CD44-220ENST00000525688 SLC18B1Q6NT16 456 aa4.73□□□□□ -1.65
CD44-220ENST00000525688 SLC25A24Q6NUK1 477 aa4.73□□□□□ -1.65
CD44-220ENST00000525688 TMEM71Q6P5X7 295 aa4.73□□□□□ -1.65
CD44-220ENST00000525688 TRILQ7L0X0 811 aa4.73□□□□□ -1.65
CD44-220ENST00000525688 TDRPQ86YL5 185 aa4.73□□□□□ -1.65
CD44-220ENST00000525688 GPSM1Q86YR5 675 aa4.73□□□□□ -1.65
CD44-220ENST00000525688 CAMK1DQ8IU85 385 aa4.73□□□□□ -1.65
CD44-220ENST00000525688 CNTN4Q8IWV2 1026 aa4.73□□□□□ -1.65
CD44-220ENST00000525688 ZCCHC9Q8N567 271 aaKnown RBP4.73□□□□□ -1.65
CD44-220ENST00000525688 HORMAD2Q8N7B1 307 aa4.73□□□□□ -1.65
CD44-220ENST00000525688 TEX45Q8NA69 505 aa4.73□□□□□ -1.65
CD44-220ENST00000525688 POC5Q8NA72 575 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms