RNA–Protein interactions for RNA: ENST00000525013.1

CAPN1-203, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-203ENST00000525013 PRSS56P0CW18 603 aa18.13■□□□□ 0.49
CAPN1-203ENST00000525013 LIFP15018 202 aa18.13■□□□□ 0.49
CAPN1-203ENST00000525013 ACRV1P26436 265 aa18.13■□□□□ 0.49
CAPN1-203ENST00000525013 FDFT1P37268 417 aa18.13■□□□□ 0.49
CAPN1-203ENST00000525013 PRLHRP49683 370 aa18.13■□□□□ 0.49
CAPN1-203ENST00000525013 PPP1CAP62136 330 aa18.13■□□□□ 0.49
CAPN1-203ENST00000525013 SH3BP2P78314 561 aa18.13■□□□□ 0.49
CAPN1-203ENST00000525013 CACNG1Q06432 222 aa18.13■□□□□ 0.49
CAPN1-203ENST00000525013 SKIDA1Q1XH10 827 aa18.13■□□□□ 0.49
CAPN1-203ENST00000525013 CCDC38Q502W7 563 aa18.13■□□□□ 0.49
CAPN1-203ENST00000525013 PPP1R21Q6ZMI0 780 aa18.13■□□□□ 0.49
CAPN1-203ENST00000525013 PRSS42Q7Z5A4 293 aa18.13■□□□□ 0.49
CAPN1-203ENST00000525013 NLGN4XQ8N0W4 816 aa18.13■□□□□ 0.49
CAPN1-203ENST00000525013 LILRA3Q8N6C8 439 aaPredicted RBP18.13■□□□□ 0.49
CAPN1-203ENST00000525013 CCDC89Q8N998 374 aa18.13■□□□□ 0.49
CAPN1-203ENST00000525013 NLGN4YQ8NFZ3 816 aaPredicted RBP18.13■□□□□ 0.49
CAPN1-203ENST00000525013 EXTL1Q92935 676 aa18.13■□□□□ 0.49
CAPN1-203ENST00000525013 RNF31Q96EP0 1072 aa18.13■□□□□ 0.49
CAPN1-203ENST00000525013 ELMO2Q96JJ3 720 aa18.13■□□□□ 0.49
CAPN1-203ENST00000525013 RMDN2Q96LZ7 410 aa18.13■□□□□ 0.49
CAPN1-203ENST00000525013 OR6C1Q96RD1 312 aa18.13■□□□□ 0.49
CAPN1-203ENST00000525013 ARHGAP9Q9BRR9 750 aa18.13■□□□□ 0.49
CAPN1-203ENST00000525013 CCM2Q9BSQ5 444 aa18.13■□□□□ 0.49
CAPN1-203ENST00000525013 SEMA4CQ9C0C4 833 aa18.13■□□□□ 0.49
CAPN1-203ENST00000525013 H7C0S8 307 aa18.12■□□□□ 0.49
CAPN1-203ENST00000525013 ITGB2P05107 769 aa18.12■□□□□ 0.49
CAPN1-203ENST00000525013 ETS1P14921 441 aa18.12■□□□□ 0.49
CAPN1-203ENST00000525013 MAP4P27816 1152 aaKnown RBP18.12■□□□□ 0.49
CAPN1-203ENST00000525013 CDH17Q12864 832 aa18.12■□□□□ 0.49
CAPN1-203ENST00000525013 ARMC6Q6NXE6 501 aa18.12■□□□□ 0.49
CAPN1-203ENST00000525013 TIPARPQ7Z3E1 657 aaKnown RBP18.12■□□□□ 0.49
CAPN1-203ENST00000525013 PRUNE1Q86TP1 453 aa18.12■□□□□ 0.49
CAPN1-203ENST00000525013 CLDN19Q8N6F1 224 aa18.12■□□□□ 0.49
CAPN1-203ENST00000525013 KIAA1143Q96AT1 154 aaPredicted RBP18.12■□□□□ 0.49
CAPN1-203ENST00000525013 SPRY4Q9C004 299 aa18.12■□□□□ 0.49
CAPN1-203ENST00000525013 RAB33BQ9H082 229 aa18.12■□□□□ 0.49
CAPN1-203ENST00000525013 VPS37BQ9H9H4 285 aa18.12■□□□□ 0.49
CAPN1-203ENST00000525013 GPN2Q9H9Y4 310 aaPredicted RBP18.12■□□□□ 0.49
CAPN1-203ENST00000525013 RAB6BQ9NRW1 208 aa18.12■□□□□ 0.49
CAPN1-203ENST00000525013 HRASLS2Q9NWW9 162 aa18.12■□□□□ 0.49
CAPN1-203ENST00000525013 SMARCAL1Q9NZC9 954 aa18.12■□□□□ 0.49
CAPN1-203ENST00000525013 COLEC10Q9Y6Z7 277 aa18.12■□□□□ 0.49
CAPN1-203ENST00000525013 TLN1Q9Y490 2541 aaKnown RBP18.12■□□□□ 0.49
CAPN1-203ENST00000525013 IGLV3-16A0A075B6K0 115 aa18.11■□□□□ 0.49
CAPN1-203ENST00000525013 TRBV5-4A0A0C4DH59 114 aa18.11■□□□□ 0.49
CAPN1-203ENST00000525013 MROH6A6NGR9 719 aa18.11■□□□□ 0.49
CAPN1-203ENST00000525013 MSNP26038 577 aaKnown RBP18.11■□□□□ 0.49
CAPN1-203ENST00000525013 DNTTIP2Q5QJE6 756 aaKnown RBP18.11■□□□□ 0.49
CAPN1-203ENST00000525013 CAPRIN2Q6IMN6 1127 aaKnown RBP18.11■□□□□ 0.49
CAPN1-203ENST00000525013 ZNF449Q6P9G9 518 aa18.11■□□□□ 0.49
CAPN1-203ENST00000525013 RASGRP3Q8IV61 690 aa18.11■□□□□ 0.49
CAPN1-203ENST00000525013 LRRC8AQ8IWT6 810 aa18.11■□□□□ 0.49
CAPN1-203ENST00000525013 PIANPQ8IYJ0 282 aa18.11■□□□□ 0.49
CAPN1-203ENST00000525013 UNC5BQ8IZJ1 945 aa18.11■□□□□ 0.49
CAPN1-203ENST00000525013 ZFPM2Q8WW38 1151 aa18.11■□□□□ 0.49
CAPN1-203ENST00000525013 KLHL6Q8WZ60 621 aa18.11■□□□□ 0.49
CAPN1-203ENST00000525013 MED8Q96G25 268 aa18.11■□□□□ 0.49
CAPN1-203ENST00000525013 ULBP3Q9BZM4 244 aa18.11■□□□□ 0.49
CAPN1-203ENST00000525013 TRIT1Q9H3H1 467 aaKnown RBP18.11■□□□□ 0.49
CAPN1-203ENST00000525013 SLC24A2Q9UI40 661 aa18.11■□□□□ 0.49
CAPN1-203ENST00000525013 TMEM184BQ9Y519 407 aaPredicted RBP18.11■□□□□ 0.49
CAPN1-203ENST00000525013 HEBP2Q9Y5Z4 205 aa18.11■□□□□ 0.49
CAPN1-203ENST00000525013 SPTBP11277 2137 aa18.1■□□□□ 0.49
CAPN1-203ENST00000525013 IGHV5-51A0A0C4DH38 117 aa18.1■□□□□ 0.49
CAPN1-203ENST00000525013 C17orf113A0A1B0GUU1 675 aa18.1■□□□□ 0.49
CAPN1-203ENST00000525013 OR6C74A6NCV1 312 aa18.1■□□□□ 0.49
CAPN1-203ENST00000525013 OR5K3A6NET4 321 aa18.1■□□□□ 0.49
CAPN1-203ENST00000525013 OR51F1A6NGY5 319 aa18.1■□□□□ 0.49
CAPN1-203ENST00000525013 NRDCO43847 1150 aa18.1■□□□□ 0.49
CAPN1-203ENST00000525013 NELFEP18615 380 aaKnown RBP18.1■□□□□ 0.49
CAPN1-203ENST00000525013 ARL4DP49703 201 aa18.1■□□□□ 0.49
CAPN1-203ENST00000525013 IL11RAQ14626 422 aa18.1■□□□□ 0.49
CAPN1-203ENST00000525013 DBN1Q16643 649 aa18.1■□□□□ 0.49
CAPN1-203ENST00000525013 XKR5Q6UX68 686 aa18.1■□□□□ 0.49
CAPN1-203ENST00000525013 OOSP2Q86WS3 158 aa18.1■□□□□ 0.49
CAPN1-203ENST00000525013 SIDT2Q8NBJ9 832 aaKnown RBP18.1■□□□□ 0.49
CAPN1-203ENST00000525013 UBXN4Q92575 508 aa18.1■□□□□ 0.49
CAPN1-203ENST00000525013 FERD3LQ96RJ6 166 aa18.1■□□□□ 0.49
CAPN1-203ENST00000525013 MAP3K3Q99759 626 aa18.1■□□□□ 0.49
CAPN1-203ENST00000525013 SLC12A9Q9BXP2 914 aa18.1■□□□□ 0.49
CAPN1-203ENST00000525013 KIR3DX1Q9H7L2 352 aa18.1■□□□□ 0.49
CAPN1-203ENST00000525013 COG4Q9H9E3 785 aa18.1■□□□□ 0.49
CAPN1-203ENST00000525013 LOC101059948A0A1B0GTJ6 334 aa18.09■□□□□ 0.49
CAPN1-203ENST00000525013 UBA6A0AVT1 1052 aaPredicted RBP18.09■□□□□ 0.49
CAPN1-203ENST00000525013 HEATR9A2RTY3 570 aa18.09■□□□□ 0.49
CAPN1-203ENST00000525013 CCDC162PA2VCL2 907 aa18.09■□□□□ 0.49
CAPN1-203ENST00000525013 IFRD1O00458 451 aaPredicted RBP18.09■□□□□ 0.49
CAPN1-203ENST00000525013 SUN1O94901 812 aa18.09■□□□□ 0.49
CAPN1-203ENST00000525013 APRTP07741 180 aa18.09■□□□□ 0.49
CAPN1-203ENST00000525013 ZNF28P17035 718 aa18.09■□□□□ 0.49
CAPN1-203ENST00000525013 NDUFS1P28331 727 aa18.09■□□□□ 0.49
CAPN1-203ENST00000525013 GRIA1P42261 906 aa18.09■□□□□ 0.49
CAPN1-203ENST00000525013 ARCN1P48444 511 aaKnown RBP18.09■□□□□ 0.49
CAPN1-203ENST00000525013 ABHD18Q0P651 414 aa18.09■□□□□ 0.49
CAPN1-203ENST00000525013 LAMB3Q13751 1172 aa18.09■□□□□ 0.49
CAPN1-203ENST00000525013 CCNG2Q16589 344 aa18.09■□□□□ 0.49
CAPN1-203ENST00000525013 TBR1Q16650 682 aa18.09■□□□□ 0.49
CAPN1-203ENST00000525013 LINC00303Q3SY05 128 aa18.09■□□□□ 0.49
CAPN1-203ENST00000525013 ZNF662Q6ZS27 426 aa18.09■□□□□ 0.49
CAPN1-203ENST00000525013 ZNF605Q86T29 641 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms