RNA–Protein interactions for RNA: ENST00000523088.5

HDAC3-216, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-216ENST00000523088 CD207Q9UJ71 328 aa7.44□□□□□ -1.22
HDAC3-216ENST00000523088 RAB23Q9ULC3 237 aa7.44□□□□□ -1.22
HDAC3-216ENST00000523088 CA14Q9ULX7 337 aa7.44□□□□□ -1.22
HDAC3-216ENST00000523088 KCNJ14Q9UNX9 436 aa7.44□□□□□ -1.22
HDAC3-216ENST00000523088 SLC9A8Q9Y2E8 581 aa7.44□□□□□ -1.22
HDAC3-216ENST00000523088 SRPRBQ9Y5M8 271 aaKnown RBP7.44□□□□□ -1.22
HDAC3-216ENST00000523088 AK5Q9Y6K8 562 aa7.44□□□□□ -1.22
HDAC3-216ENST00000523088 CNTNAP2Q9UHC6 1331 aa7.44□□□□□ -1.22
HDAC3-216ENST00000523088 A0A1W2PN81 502 aa7.43□□□□□ -1.22
HDAC3-216ENST00000523088 A8MXQ7 604 aa7.43□□□□□ -1.22
HDAC3-216ENST00000523088 CFAP99D6REC4 459 aa7.43□□□□□ -1.22
HDAC3-216ENST00000523088 TAF4O00268 1085 aa7.43□□□□□ -1.22
HDAC3-216ENST00000523088 PODXLO00592 558 aa7.43□□□□□ -1.22
HDAC3-216ENST00000523088 TFECO14948 347 aaPredicted RBP7.43□□□□□ -1.22
HDAC3-216ENST00000523088 KIAA0391O15091 583 aaKnown RBP7.43□□□□□ -1.22
HDAC3-216ENST00000523088 VILLO15195 856 aa7.43□□□□□ -1.22
HDAC3-216ENST00000523088 TOX3O15405 576 aaPredicted RBP7.43□□□□□ -1.22
HDAC3-216ENST00000523088 SLC31A2O15432 143 aa7.43□□□□□ -1.22
HDAC3-216ENST00000523088 GPR39O43194 453 aa7.43□□□□□ -1.22
HDAC3-216ENST00000523088 SLC37A4O43826 429 aa7.43□□□□□ -1.22
HDAC3-216ENST00000523088 EDIL3O43854 480 aa7.43□□□□□ -1.22
HDAC3-216ENST00000523088 ZNF623O75123 536 aa7.43□□□□□ -1.22
HDAC3-216ENST00000523088 CSDE1O75534 798 aaKnown RBP7.43□□□□□ -1.22
HDAC3-216ENST00000523088 SPDEFO95238 335 aa7.43□□□□□ -1.22
HDAC3-216ENST00000523088 MBP02144 154 aa7.43□□□□□ -1.22
HDAC3-216ENST00000523088 NTRK1P04629 796 aa7.43□□□□□ -1.22
HDAC3-216ENST00000523088 IFNA4P05014 189 aa7.43□□□□□ -1.22
HDAC3-216ENST00000523088 HNRNPLP14866 589 aaKnown RBP eCLIP7.43□□□□□ -1.22
HDAC3-216ENST00000523088 YWHAQP27348 245 aa7.43□□□□□ -1.22
HDAC3-216ENST00000523088 GNA15P30679 374 aa7.43□□□□□ -1.22
HDAC3-216ENST00000523088 AKT1P31749 480 aa7.43□□□□□ -1.22
HDAC3-216ENST00000523088 CHRNA7P36544 502 aa7.43□□□□□ -1.22
HDAC3-216ENST00000523088 CDKN1BP46527 198 aa7.43□□□□□ -1.22
HDAC3-216ENST00000523088 SLC11A2P49281 568 aa7.43□□□□□ -1.22
HDAC3-216ENST00000523088 MECP2P51608 486 aaKnown RBP7.43□□□□□ -1.22
HDAC3-216ENST00000523088 ITGA8P53708 1063 aa7.43□□□□□ -1.22
HDAC3-216ENST00000523088 HYAL1Q12794 435 aa7.43□□□□□ -1.22
HDAC3-216ENST00000523088 IL24Q13007 206 aa7.43□□□□□ -1.22
HDAC3-216ENST00000523088 RPA4Q13156 261 aa7.43□□□□□ -1.22
HDAC3-216ENST00000523088 PDCLQ13371 301 aa7.43□□□□□ -1.22
HDAC3-216ENST00000523088 IKZF1Q13422 519 aa7.43□□□□□ -1.22
HDAC3-216ENST00000523088 RIN1Q13671 783 aa7.43□□□□□ -1.22
HDAC3-216ENST00000523088 ATP1A4Q13733 1029 aa7.43□□□□□ -1.22
HDAC3-216ENST00000523088 ZNF568Q3ZCX4 644 aa7.43□□□□□ -1.22
HDAC3-216ENST00000523088 GALNTL6Q49A17 601 aa7.43□□□□□ -1.22
HDAC3-216ENST00000523088 PKDCCQ504Y2 493 aa7.43□□□□□ -1.22
HDAC3-216ENST00000523088 PAGE2BQ5JRK9 111 aa7.43□□□□□ -1.22
HDAC3-216ENST00000523088 UBAP2Q5T6F2 1119 aaKnown RBP7.43□□□□□ -1.22
HDAC3-216ENST00000523088 ZNF385CQ66K41 422 aaPredicted RBP7.43□□□□□ -1.22
HDAC3-216ENST00000523088 BHLHB9Q6PI77 547 aa7.43□□□□□ -1.22
HDAC3-216ENST00000523088 ASRGL1Q7L266 308 aa7.43□□□□□ -1.22
HDAC3-216ENST00000523088 TRMT1LQ7Z2T5 733 aaKnown RBP7.43□□□□□ -1.22
HDAC3-216ENST00000523088 GPBP1Q86WP2 473 aa7.43□□□□□ -1.22
HDAC3-216ENST00000523088 SCN4BQ8IWT1 228 aa7.43□□□□□ -1.22
HDAC3-216ENST00000523088 THEM5Q8N1Q8 247 aa7.43□□□□□ -1.22
HDAC3-216ENST00000523088 ZCCHC7Q8N3Z6 543 aaKnown RBP7.43□□□□□ -1.22
HDAC3-216ENST00000523088 LRRC20Q8TCA0 184 aa7.43□□□□□ -1.22
HDAC3-216ENST00000523088 UFD1Q92890 307 aa7.43□□□□□ -1.22
HDAC3-216ENST00000523088 TMEM169Q96HH4 297 aa7.43□□□□□ -1.22
HDAC3-216ENST00000523088 PPP1R36Q96LQ0 422 aa7.43□□□□□ -1.22
HDAC3-216ENST00000523088 LRFN5Q96NI6 719 aa7.43□□□□□ -1.22
HDAC3-216ENST00000523088 ACBD6Q9BR61 282 aa7.43□□□□□ -1.22
HDAC3-216ENST00000523088 TMEM175Q9BSA9 504 aa7.43□□□□□ -1.22
HDAC3-216ENST00000523088 KIFC1Q9BW19 673 aa7.43□□□□□ -1.22
HDAC3-216ENST00000523088 BBS2Q9BXC9 721 aa7.43□□□□□ -1.22
HDAC3-216ENST00000523088 RAB34Q9BZG1 259 aa7.43□□□□□ -1.22
HDAC3-216ENST00000523088 TINAGL1Q9GZM7 467 aaPredicted RBP7.43□□□□□ -1.22
HDAC3-216ENST00000523088 OR51M1Q9H341 326 aa7.43□□□□□ -1.22
HDAC3-216ENST00000523088 TP63Q9H3D4 680 aaPredicted RBP7.43□□□□□ -1.22
HDAC3-216ENST00000523088 RIMS4Q9H426 269 aaPredicted RBP7.43□□□□□ -1.22
HDAC3-216ENST00000523088 EXO5Q9H790 373 aa7.43□□□□□ -1.22
HDAC3-216ENST00000523088 TLE6Q9H808 572 aa7.43□□□□□ -1.22
HDAC3-216ENST00000523088 ARHGEF4Q9NR80 690 aa7.43□□□□□ -1.22
HDAC3-216ENST00000523088 NKIRAS1Q9NYS0 192 aa7.43□□□□□ -1.22
HDAC3-216ENST00000523088 SPG21Q9NZD8 308 aa7.43□□□□□ -1.22
HDAC3-216ENST00000523088 ZNF212Q9UDV6 495 aa7.43□□□□□ -1.22
HDAC3-216ENST00000523088 PCDHGB4Q9UN71 923 aa7.43□□□□□ -1.22
HDAC3-216ENST00000523088 PLCL2Q9UPR0 1127 aa7.43□□□□□ -1.22
HDAC3-216ENST00000523088 MRPS2Q9Y399 296 aaKnown RBP7.43□□□□□ -1.22
HDAC3-216ENST00000523088 KCNE2Q9Y6J6 123 aa7.43□□□□□ -1.22
HDAC3-216ENST00000523088 A0A087WZ62 844 aa7.42□□□□□ -1.22
HDAC3-216ENST00000523088 MARCH11A6NNE9 402 aa7.42□□□□□ -1.22
HDAC3-216ENST00000523088 H3BQ06 376 aaPredicted RBP7.42□□□□□ -1.22
HDAC3-216ENST00000523088 ADAMTS3O15072 1205 aa7.42□□□□□ -1.22
HDAC3-216ENST00000523088 MBTPS2O43462 519 aa7.42□□□□□ -1.22
HDAC3-216ENST00000523088 GMFGO60234 142 aa7.42□□□□□ -1.22
HDAC3-216ENST00000523088 TSPAN2O60636 221 aa7.42□□□□□ -1.22
HDAC3-216ENST00000523088 GCATO75600 419 aa7.42□□□□□ -1.22
HDAC3-216ENST00000523088 RFPL3O75679 317 aa7.42□□□□□ -1.22
HDAC3-216ENST00000523088 STBD1O95210 358 aa7.42□□□□□ -1.22
HDAC3-216ENST00000523088 CTDNEP1O95476 244 aa7.42□□□□□ -1.22
HDAC3-216ENST00000523088 ZBTB11O95625 1053 aaPredicted RBP7.42□□□□□ -1.22
HDAC3-216ENST00000523088 LDOC1O95751 146 aaPredicted RBP7.42□□□□□ -1.22
HDAC3-216ENST00000523088 TGM6O95932 706 aa7.42□□□□□ -1.22
HDAC3-216ENST00000523088 IL1AP01583 271 aa7.42□□□□□ -1.22
HDAC3-216ENST00000523088 ASGR2P07307 311 aa7.42□□□□□ -1.22
HDAC3-216ENST00000523088 CYC1P08574 325 aa7.42□□□□□ -1.22
HDAC3-216ENST00000523088 SMIM6P0DI80 62 aa7.42□□□□□ -1.22
HDAC3-216ENST00000523088 MSH3P20585 1137 aa7.42□□□□□ -1.22
HDAC3-216ENST00000523088 PRPS1L1P21108 318 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms