RNA–Protein interactions for RNA: ENST00000521700.5

TRAPPC9-211, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-211ENST00000521700 BASP1P80723 227 aaKnown RBP17.47■□□□□ 0.39
TRAPPC9-211ENST00000521700 ACVR1Q04771 509 aa17.47■□□□□ 0.39
TRAPPC9-211ENST00000521700 VAC14Q08AM6 782 aa17.47■□□□□ 0.39
TRAPPC9-211ENST00000521700 ITIH4Q14624 930 aa17.47■□□□□ 0.39
TRAPPC9-211ENST00000521700 DCAF12Q5T6F0 453 aa17.47■□□□□ 0.39
TRAPPC9-211ENST00000521700 ANKS6Q68DC2 871 aa17.47■□□□□ 0.39
TRAPPC9-211ENST00000521700 SLC35F6Q8N357 371 aa17.47■□□□□ 0.39
TRAPPC9-211ENST00000521700 SNRNP27Q8WVK2 155 aaKnown RBP17.47■□□□□ 0.39
TRAPPC9-211ENST00000521700 CCNL2Q96S94 520 aaPredicted RBP17.47■□□□□ 0.39
TRAPPC9-211ENST00000521700 ASPSCR1Q9BZE9 553 aa17.47■□□□□ 0.39
TRAPPC9-211ENST00000521700 RAB33BQ9H082 229 aa17.47■□□□□ 0.39
TRAPPC9-211ENST00000521700 COG4Q9H9E3 785 aa17.47■□□□□ 0.39
TRAPPC9-211ENST00000521700 FBXO8Q9NRD0 319 aa17.47■□□□□ 0.39
TRAPPC9-211ENST00000521700 EPHA6Q9UF33 1036 aa17.47■□□□□ 0.39
TRAPPC9-211ENST00000521700 TCAF1Q9Y4C2 921 aa17.47■□□□□ 0.39
TRAPPC9-211ENST00000521700 PRSS21Q9Y6M0 314 aa17.47■□□□□ 0.39
TRAPPC9-211ENST00000521700 PIKFYVEQ9Y2I7 2098 aa17.47■□□□□ 0.39
TRAPPC9-211ENST00000521700 SDK2Q58EX2 2172 aa17.47■□□□□ 0.39
TRAPPC9-211ENST00000521700 K7ENP7 123 aa17.46■□□□□ 0.39
TRAPPC9-211ENST00000521700 TOX3O15405 576 aaPredicted RBP17.46■□□□□ 0.39
TRAPPC9-211ENST00000521700 KIF1CO43896 1103 aaKnown RBP17.46■□□□□ 0.39
TRAPPC9-211ENST00000521700 AP2A2O94973 939 aa17.46■□□□□ 0.39
TRAPPC9-211ENST00000521700 NSG1P42857 185 aa17.46■□□□□ 0.39
TRAPPC9-211ENST00000521700 SESN2P58004 480 aaPredicted RBP17.46■□□□□ 0.39
TRAPPC9-211ENST00000521700 RAB15P59190 212 aa17.46■□□□□ 0.39
TRAPPC9-211ENST00000521700 SRSF6Q13247 344 aaKnown RBP17.46■□□□□ 0.39
TRAPPC9-211ENST00000521700 GSE1Q14687 1217 aa17.46■□□□□ 0.39
TRAPPC9-211ENST00000521700 TRIP13Q15645 432 aaPredicted RBP17.46■□□□□ 0.39
TRAPPC9-211ENST00000521700 PCID2Q5JVF3 399 aa17.46■□□□□ 0.39
TRAPPC9-211ENST00000521700 TTC27Q6P3X3 843 aa17.46■□□□□ 0.39
TRAPPC9-211ENST00000521700 INO80CQ6PI98 192 aaPredicted RBP17.46■□□□□ 0.39
TRAPPC9-211ENST00000521700 CCDC81Q6ZN84 652 aa17.46■□□□□ 0.39
TRAPPC9-211ENST00000521700 ZNF534Q76KX8 674 aa17.46■□□□□ 0.39
TRAPPC9-211ENST00000521700 NLRP9Q7RTR0 991 aa17.46■□□□□ 0.39
TRAPPC9-211ENST00000521700 ZFPM2Q8WW38 1151 aa17.46■□□□□ 0.39
TRAPPC9-211ENST00000521700 ZDHHC12Q96GR4 267 aa17.46■□□□□ 0.39
TRAPPC9-211ENST00000521700 CTRCQ99895 268 aa17.46■□□□□ 0.39
TRAPPC9-211ENST00000521700 APMAPQ9HDC9 416 aa17.46■□□□□ 0.39
TRAPPC9-211ENST00000521700 CHRAC1Q9NRG0 131 aa17.46■□□□□ 0.39
TRAPPC9-211ENST00000521700 TRMT1Q9NXH9 659 aaKnown RBP17.46■□□□□ 0.39
TRAPPC9-211ENST00000521700 TTC7AQ9ULT0 858 aaPredicted RBP17.46■□□□□ 0.39
TRAPPC9-211ENST00000521700 PCDHB11Q9Y5F2 797 aa17.46■□□□□ 0.39
TRAPPC9-211ENST00000521700 TEX51A0A1B0GUA7 166 aa17.45■□□□□ 0.38
TRAPPC9-211ENST00000521700 STMND1H3BQB6 276 aa17.45■□□□□ 0.38
TRAPPC9-211ENST00000521700 PDHA2P29803 388 aa17.45■□□□□ 0.38
TRAPPC9-211ENST00000521700 SEPHS1P49903 392 aa17.45■□□□□ 0.38
TRAPPC9-211ENST00000521700 PPP1CAP62136 330 aa17.45■□□□□ 0.38
TRAPPC9-211ENST00000521700 PLCL1Q15111 1095 aa17.45■□□□□ 0.38
TRAPPC9-211ENST00000521700 IRGCQ6NXR0 463 aa17.45■□□□□ 0.38
TRAPPC9-211ENST00000521700 AFTPHQ6ULP2 937 aa17.45■□□□□ 0.38
TRAPPC9-211ENST00000521700 PACS1Q6VY07 963 aa17.45■□□□□ 0.38
TRAPPC9-211ENST00000521700 FAM92BQ6ZTR7 304 aa17.45■□□□□ 0.38
TRAPPC9-211ENST00000521700 PPHLN1Q8NEY8 458 aaKnown RBP17.45■□□□□ 0.38
TRAPPC9-211ENST00000521700 OR6P1Q8NGX9 317 aa17.45■□□□□ 0.38
TRAPPC9-211ENST00000521700 OR4L1Q8NH43 312 aa17.45■□□□□ 0.38
TRAPPC9-211ENST00000521700 PEX13Q92968 403 aa17.45■□□□□ 0.38
TRAPPC9-211ENST00000521700 MAGOHBQ96A72 148 aaKnown RBP17.45■□□□□ 0.38
TRAPPC9-211ENST00000521700 AP1M1Q9BXS5 423 aa17.45■□□□□ 0.38
TRAPPC9-211ENST00000521700 SPRY4Q9C004 299 aa17.45■□□□□ 0.38
TRAPPC9-211ENST00000521700 OR52A5Q9H2C5 316 aa17.45■□□□□ 0.38
TRAPPC9-211ENST00000521700 VPS37BQ9H9H4 285 aa17.45■□□□□ 0.38
TRAPPC9-211ENST00000521700 SIDT1Q9NXL6 827 aaKnown RBP17.45■□□□□ 0.38
TRAPPC9-211ENST00000521700 SLC24A2Q9UI40 661 aa17.45■□□□□ 0.38
TRAPPC9-211ENST00000521700 COLEC10Q9Y6Z7 277 aa17.45■□□□□ 0.38
TRAPPC9-211ENST00000521700 ATRXP46100 2492 aa17.44■□□□□ 0.38
TRAPPC9-211ENST00000521700 TCRBV7S3A2A0A539 114 aa17.44■□□□□ 0.38
TRAPPC9-211ENST00000521700 OR1I1O60431 355 aa17.44■□□□□ 0.38
TRAPPC9-211ENST00000521700 RASSF9O75901 435 aa17.44■□□□□ 0.38
TRAPPC9-211ENST00000521700 NPY2RP49146 381 aa17.44■□□□□ 0.38
TRAPPC9-211ENST00000521700 CRADDP78560 199 aa17.44■□□□□ 0.38
TRAPPC9-211ENST00000521700 SEMA3AQ14563 771 aa17.44■□□□□ 0.38
TRAPPC9-211ENST00000521700 CACHD1Q5VU97 1274 aa17.44■□□□□ 0.38
TRAPPC9-211ENST00000521700 LYPLAL1Q5VWZ2 237 aa17.44■□□□□ 0.38
TRAPPC9-211ENST00000521700 KLHL35Q6PF15 583 aa17.44■□□□□ 0.38
TRAPPC9-211ENST00000521700 PRSS42Q7Z5A4 293 aa17.44■□□□□ 0.38
TRAPPC9-211ENST00000521700 VASH2Q86V25 355 aa17.44■□□□□ 0.38
TRAPPC9-211ENST00000521700 COG1Q8WTW3 980 aa17.44■□□□□ 0.38
TRAPPC9-211ENST00000521700 KLHL6Q8WZ60 621 aa17.44■□□□□ 0.38
TRAPPC9-211ENST00000521700 NKD1Q969G9 470 aa17.44■□□□□ 0.38
TRAPPC9-211ENST00000521700 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.44■□□□□ 0.384e-10■■■■■ 86.3
TRAPPC9-211ENST00000521700 SGSM3Q96HU1 749 aa17.44■□□□□ 0.38
TRAPPC9-211ENST00000521700 TEFMQ96QE5 360 aaKnown RBP17.44■□□□□ 0.38
TRAPPC9-211ENST00000521700 UBL7Q96S82 380 aaPredicted RBP17.44■□□□□ 0.38
TRAPPC9-211ENST00000521700 OSBPL9Q96SU4 736 aa17.44■□□□□ 0.38
TRAPPC9-211ENST00000521700 ZNF768Q9H5H4 540 aaKnown RBP17.44■□□□□ 0.38
TRAPPC9-211ENST00000521700 KIR3DX1Q9H7L2 352 aa17.44■□□□□ 0.38
TRAPPC9-211ENST00000521700 SEMA5BQ9P283 1151 aa17.44■□□□□ 0.38
TRAPPC9-211ENST00000521700 AP3B1O00203 1094 aa17.43■□□□□ 0.38
TRAPPC9-211ENST00000521700 POLR1CO15160 346 aaPredicted RBP17.43■□□□□ 0.38
TRAPPC9-211ENST00000521700 KRT14P02533 472 aa17.43■□□□□ 0.38
TRAPPC9-211ENST00000521700 GSTM1P09488 218 aa17.43■□□□□ 0.38
TRAPPC9-211ENST00000521700 TPSB2P20231 275 aa17.43■□□□□ 0.38
TRAPPC9-211ENST00000521700 PREPP48147 710 aa17.43■□□□□ 0.38
TRAPPC9-211ENST00000521700 CD151P48509 253 aa17.43■□□□□ 0.38
TRAPPC9-211ENST00000521700 VPS41P49754 854 aa17.43■□□□□ 0.38
TRAPPC9-211ENST00000521700 TERF1P54274 439 aa17.43■□□□□ 0.38
TRAPPC9-211ENST00000521700 SH3BP2P78314 561 aa17.43■□□□□ 0.38
TRAPPC9-211ENST00000521700 PRAMEP78395 509 aa17.43■□□□□ 0.38
TRAPPC9-211ENST00000521700 CDK16Q00536 496 aa17.43■□□□□ 0.38
TRAPPC9-211ENST00000521700 GSTM4Q03013 218 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms