RNA–Protein interactions for RNA: ENST00000521559.1

VPS13B-209, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 466 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-209ENST00000521559 GUF1Q8N442 669 aaKnown RBP3.31□□□□□ -1.88
VPS13B-209ENST00000521559 TRIML1Q8N9V2 468 aa3.31□□□□□ -1.88
VPS13B-209ENST00000521559 CLEC18CQ8NCF0 446 aa3.31□□□□□ -1.88
VPS13B-209ENST00000521559 KIAA0895Q8NCT3 520 aa3.31□□□□□ -1.88
VPS13B-209ENST00000521559 CEP76Q8TAP6 659 aa3.31□□□□□ -1.88
VPS13B-209ENST00000521559 PHOSPHO2Q8TCD6 241 aa3.31□□□□□ -1.88
VPS13B-209ENST00000521559 FAM216AQ8WUB2 273 aa3.31□□□□□ -1.88
VPS13B-209ENST00000521559 SCFD1Q8WVM8 642 aa3.31□□□□□ -1.88
VPS13B-209ENST00000521559 THAP4Q8WY91 577 aa3.31□□□□□ -1.88
VPS13B-209ENST00000521559 DHTKD1Q96HY7 919 aaPredicted RBP3.31□□□□□ -1.88
VPS13B-209ENST00000521559 CPB2Q96IY4 423 aa3.31□□□□□ -1.88
VPS13B-209ENST00000521559 TCHPQ9BT92 498 aa3.31□□□□□ -1.88
VPS13B-209ENST00000521559 DDX23Q9BUQ8 820 aaKnown RBP3.31□□□□□ -1.88
VPS13B-209ENST00000521559 FGFBP2Q9BYJ0 223 aa3.31□□□□□ -1.88
VPS13B-209ENST00000521559 CLPBQ9H078 707 aa3.31□□□□□ -1.88
VPS13B-209ENST00000521559 PRO3102Q9H379 93 aa3.31□□□□□ -1.88
VPS13B-209ENST00000521559 PDZD7Q9H5P4 517 aa3.31□□□□□ -1.88
VPS13B-209ENST00000521559 TMEM206Q9H813 350 aa3.31□□□□□ -1.88
VPS13B-209ENST00000521559 ITM2CQ9NQX7 267 aa3.31□□□□□ -1.88
VPS13B-209ENST00000521559 RGS18Q9NS28 235 aa3.31□□□□□ -1.88
VPS13B-209ENST00000521559 CGNQ9P2M7 1197 aaKnown RBP3.31□□□□□ -1.88
VPS13B-209ENST00000521559 SUFUQ9UMX1 484 aa3.31□□□□□ -1.88
VPS13B-209ENST00000521559 PIN4Q9Y237 131 aaKnown RBP3.31□□□□□ -1.88
VPS13B-209ENST00000521559 GPR52Q9Y2T5 361 aa3.31□□□□□ -1.88
VPS13B-209ENST00000521559 PCDHGB1Q9Y5G3 927 aa3.31□□□□□ -1.88
VPS13B-209ENST00000521559 STYXL1Q9Y6J8 313 aa3.31□□□□□ -1.88
VPS13B-209ENST00000521559 PLXNA1Q9UIW2 1896 aa3.3□□□□□ -1.88
VPS13B-209ENST00000521559 A0A096LPK6 155 aa3.3□□□□□ -1.88
VPS13B-209ENST00000521559 HSFX4A0A1B0GTS1 333 aaPredicted RBP3.3□□□□□ -1.88
VPS13B-209ENST00000521559 HSFX3A0A1B0GWH4 333 aaPredicted RBP3.3□□□□□ -1.88
VPS13B-209ENST00000521559 H0Y3Z8 333 aa3.3□□□□□ -1.88
VPS13B-209ENST00000521559 I6L893 689 aaPredicted RBP3.3□□□□□ -1.88
VPS13B-209ENST00000521559 PDXKO00764 312 aa3.3□□□□□ -1.88
VPS13B-209ENST00000521559 PSMA7O14818 248 aa3.3□□□□□ -1.88
VPS13B-209ENST00000521559 CLDN3O15551 220 aa3.3□□□□□ -1.88
VPS13B-209ENST00000521559 TGFB1I1O43294 461 aa3.3□□□□□ -1.88
VPS13B-209ENST00000521559 EXTL3O43909 919 aa3.3□□□□□ -1.88
VPS13B-209ENST00000521559 KRT38O76015 456 aa3.3□□□□□ -1.88
VPS13B-209ENST00000521559 LETM1O95202 739 aaPredicted RBP3.3□□□□□ -1.88
VPS13B-209ENST00000521559 DDAH2O95865 285 aa3.3□□□□□ -1.88
VPS13B-209ENST00000521559 EDN1P05305 212 aa3.3□□□□□ -1.88
VPS13B-209ENST00000521559 CLTAP09496 248 aa3.3□□□□□ -1.88
VPS13B-209ENST00000521559 MCF2P10911 925 aa3.3□□□□□ -1.88
VPS13B-209ENST00000521559 YWHAQP27348 245 aa3.3□□□□□ -1.88
VPS13B-209ENST00000521559 PPP1R2P41236 205 aa3.3□□□□□ -1.88
VPS13B-209ENST00000521559 PNPLA4P41247 253 aa3.3□□□□□ -1.88
VPS13B-209ENST00000521559 PRCPP42785 496 aa3.3□□□□□ -1.88
VPS13B-209ENST00000521559 GPR12P47775 334 aa3.3□□□□□ -1.88
VPS13B-209ENST00000521559 PPP3CCP48454 512 aa3.3□□□□□ -1.88
VPS13B-209ENST00000521559 AMTP48728 403 aa3.3□□□□□ -1.88
VPS13B-209ENST00000521559 DEFB103AP81534 67 aa3.3□□□□□ -1.88
VPS13B-209ENST00000521559 POU5F1Q01860 360 aaKnown RBP3.3□□□□□ -1.88
VPS13B-209ENST00000521559 HYAL1Q12794 435 aa3.3□□□□□ -1.88
VPS13B-209ENST00000521559 MYBPC2Q14324 1141 aa3.3□□□□□ -1.88
VPS13B-209ENST00000521559 TAF12Q16514 161 aa3.3□□□□□ -1.88
VPS13B-209ENST00000521559 NFIL3Q16649 462 aa3.3□□□□□ -1.88
VPS13B-209ENST00000521559 IZUMO4Q1ZYL8 232 aa3.3□□□□□ -1.88
VPS13B-209ENST00000521559 KLHL40Q2TBA0 621 aa3.3□□□□□ -1.88
VPS13B-209ENST00000521559 DCAF4L1Q3SXM0 396 aa3.3□□□□□ -1.88
VPS13B-209ENST00000521559 C9orf50Q5SZB4 431 aa3.3□□□□□ -1.88
VPS13B-209ENST00000521559 SLC39A4Q6P5W5 647 aa3.3□□□□□ -1.88
VPS13B-209ENST00000521559 SLC27A1Q6PCB7 646 aa3.3□□□□□ -1.88
VPS13B-209ENST00000521559 SASS6Q6UVJ0 657 aa3.3□□□□□ -1.88
VPS13B-209ENST00000521559 RBM43Q6ZSC3 357 aaKnown RBP3.3□□□□□ -1.88
VPS13B-209ENST00000521559 CREB3L2Q70SY1 520 aa3.3□□□□□ -1.88
VPS13B-209ENST00000521559 RRAGAQ7L523 313 aa3.3□□□□□ -1.88
VPS13B-209ENST00000521559 RNF144BQ7Z419 303 aa3.3□□□□□ -1.88
VPS13B-209ENST00000521559 PATL1Q86TB9 770 aaKnown RBP3.3□□□□□ -1.88
VPS13B-209ENST00000521559 RBM23Q86U06 439 aaKnown RBP3.3□□□□□ -1.88
VPS13B-209ENST00000521559 CDR2LQ86X02 465 aaPredicted RBP3.3□□□□□ -1.88
VPS13B-209ENST00000521559 HERC6Q8IVU3 1022 aa3.3□□□□□ -1.88
VPS13B-209ENST00000521559 BRSK2Q8IWQ3 736 aa3.3□□□□□ -1.88
VPS13B-209ENST00000521559 NELFCDQ8IXH7 590 aa3.3□□□□□ -1.88
VPS13B-209ENST00000521559 C12orf56Q8IXR9 622 aa3.3□□□□□ -1.88
VPS13B-209ENST00000521559 HACE1Q8IYU2 909 aa3.3□□□□□ -1.88
VPS13B-209ENST00000521559 ADSSL1Q8N142 457 aa3.3□□□□□ -1.88
VPS13B-209ENST00000521559 SCAIQ8N9R8 606 aa3.3□□□□□ -1.88
VPS13B-209ENST00000521559 MLKLQ8NB16 471 aa3.3□□□□□ -1.88
VPS13B-209ENST00000521559 GOLGA5Q8TBA6 731 aa3.3□□□□□ -1.88
VPS13B-209ENST00000521559 STT3BQ8TCJ2 826 aa3.3□□□□□ -1.88
VPS13B-209ENST00000521559 C2CD4CQ8TF44 421 aa3.3□□□□□ -1.88
VPS13B-209ENST00000521559 RSPH1Q8WYR4 309 aa3.3□□□□□ -1.88
VPS13B-209ENST00000521559 NCSTNQ92542 709 aa3.3□□□□□ -1.88
VPS13B-209ENST00000521559 TOP1MTQ969P6 601 aa3.3□□□□□ -1.88
VPS13B-209ENST00000521559 SYAP1Q96A49 352 aaPredicted RBP3.3□□□□□ -1.88
VPS13B-209ENST00000521559 SDCCAG3Q96C92 435 aa3.3□□□□□ -1.88
VPS13B-209ENST00000521559 RTP4Q96DX8 246 aa3.3□□□□□ -1.88
VPS13B-209ENST00000521559 BICD1Q96G01 975 aa3.3□□□□□ -1.88
VPS13B-209ENST00000521559 APOLD1Q96LR9 279 aa3.3□□□□□ -1.88
VPS13B-209ENST00000521559 TSPAN18Q96SJ8 248 aa3.3□□□□□ -1.88
VPS13B-209ENST00000521559 ADPGKQ9BRR6 497 aa3.3□□□□□ -1.88
VPS13B-209ENST00000521559 CCDC94Q9BW85 323 aaPredicted RBP3.3□□□□□ -1.88
VPS13B-209ENST00000521559 PLEKHA5Q9HAU0 1116 aa3.3□□□□□ -1.88
VPS13B-209ENST00000521559 NOD2Q9HC29 1040 aa3.3□□□□□ -1.88
VPS13B-209ENST00000521559 UBN1Q9NPG3 1134 aa3.3□□□□□ -1.88
VPS13B-209ENST00000521559 AGPAT3Q9NRZ7 376 aa3.3□□□□□ -1.88
VPS13B-209ENST00000521559 TXLNGQ9NUQ3 528 aa3.3□□□□□ -1.88
VPS13B-209ENST00000521559 THAP1Q9NVV9 213 aa3.3□□□□□ -1.88
VPS13B-209ENST00000521559 ANO10Q9NW15 660 aa3.3□□□□□ -1.88
VPS13B-209ENST00000521559 DMAC2Q9NW81 257 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms