RNA–Protein interactions for RNA: ENST00000521340.1

HMGN1P28-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 28, humanhuman

BASIC

Gene HMGN1P28, Length 364 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P28-201ENST00000521340 INSL5Q9Y5Q6 135 aa3.33□□□□□ -1.88
HMGN1P28-201ENST00000521340 PTPRCP08575 1304 aa3.33□□□□□ -1.88
HMGN1P28-201ENST00000521340 TTC3P53804 2025 aa3.32□□□□□ -1.88
HMGN1P28-201ENST00000521340 PRSS51A0A1B0GVH4 220 aa3.32□□□□□ -1.88
HMGN1P28-201ENST00000521340 hDV102S1A0JD36 115 aa3.32□□□□□ -1.88
HMGN1P28-201ENST00000521340 HTR3EA5X5Y0 456 aa3.32□□□□□ -1.88
HMGN1P28-201ENST00000521340 PPEF2O14830 753 aa3.32□□□□□ -1.88
HMGN1P28-201ENST00000521340 ASAP2O43150 1006 aa3.32□□□□□ -1.88
HMGN1P28-201ENST00000521340 WDPCPO95876 746 aa3.32□□□□□ -1.88
HMGN1P28-201ENST00000521340 CSN3P07498 182 aa3.32□□□□□ -1.88
HMGN1P28-201ENST00000521340 OR2T7P0C7T2 308 aa3.32□□□□□ -1.88
HMGN1P28-201ENST00000521340 LINC00271P0C7V0 271 aa3.32□□□□□ -1.88
HMGN1P28-201ENST00000521340 SUPT20HL2P0C7V6 817 aa3.32□□□□□ -1.88
HMGN1P28-201ENST00000521340 HLA-DOBP13765 273 aa3.32□□□□□ -1.88
HMGN1P28-201ENST00000521340 GM2AP17900 193 aa3.32□□□□□ -1.88
HMGN1P28-201ENST00000521340 CD22P20273 847 aa3.32□□□□□ -1.88
HMGN1P28-201ENST00000521340 CD38P28907 300 aa3.32□□□□□ -1.88
HMGN1P28-201ENST00000521340 HOXD3P31249 432 aaPredicted RBP3.32□□□□□ -1.88
HMGN1P28-201ENST00000521340 PCGF2P35227 344 aa3.32□□□□□ -1.88
HMGN1P28-201ENST00000521340 NR4A2P43354 598 aa3.32□□□□□ -1.88
HMGN1P28-201ENST00000521340 CRKLP46109 303 aaKnown RBP3.32□□□□□ -1.88
HMGN1P28-201ENST00000521340 KRTAP10-11P60412 298 aa3.32□□□□□ -1.88
HMGN1P28-201ENST00000521340 PRKCZQ05513 592 aa3.32□□□□□ -1.88
HMGN1P28-201ENST00000521340 PRTGQ2VWP7 1150 aa3.32□□□□□ -1.88
HMGN1P28-201ENST00000521340 ZDHHC20Q5W0Z9 365 aa3.32□□□□□ -1.88
HMGN1P28-201ENST00000521340 SHQ1Q6PI26 577 aaKnown RBP3.32□□□□□ -1.88
HMGN1P28-201ENST00000521340 LINGO4Q6UY18 593 aa3.32□□□□□ -1.88
HMGN1P28-201ENST00000521340 OTOAQ7RTW8 1153 aa3.32□□□□□ -1.88
HMGN1P28-201ENST00000521340 TMPRSS11BQ86T26 416 aa3.32□□□□□ -1.88
HMGN1P28-201ENST00000521340 TMEM173Q86WV6 379 aaPredicted RBP3.32□□□□□ -1.88
HMGN1P28-201ENST00000521340 TMEM219Q86XT9 240 aa3.32□□□□□ -1.88
HMGN1P28-201ENST00000521340 FAM219AQ8IW50 185 aa3.32□□□□□ -1.88
HMGN1P28-201ENST00000521340 ANKRD13CQ8N6S4 541 aa3.32□□□□□ -1.88
HMGN1P28-201ENST00000521340 IQUBQ8NA54 791 aa3.32□□□□□ -1.88
HMGN1P28-201ENST00000521340 OR52I2Q8NH67 350 aa3.32□□□□□ -1.88
HMGN1P28-201ENST00000521340 ROBO4Q8WZ75 1007 aa3.32□□□□□ -1.88
HMGN1P28-201ENST00000521340 WASF1Q92558 559 aa3.32□□□□□ -1.88
HMGN1P28-201ENST00000521340 NAF1Q96HR8 494 aaKnown RBP3.32□□□□□ -1.88
HMGN1P28-201ENST00000521340 ZNF558Q96NG5 402 aa3.32□□□□□ -1.88
HMGN1P28-201ENST00000521340 SPAG5Q96R06 1193 aa3.32□□□□□ -1.88
HMGN1P28-201ENST00000521340 MTERF1Q99551 399 aaKnown RBP3.32□□□□□ -1.88
HMGN1P28-201ENST00000521340 CPNE1Q99829 537 aa3.32□□□□□ -1.88
HMGN1P28-201ENST00000521340 EGFL8Q99944 293 aa3.32□□□□□ -1.88
HMGN1P28-201ENST00000521340 BTBD10Q9BSF8 475 aa3.32□□□□□ -1.88
HMGN1P28-201ENST00000521340 MMTAG2Q9BU76 263 aaKnown RBP3.32□□□□□ -1.88
HMGN1P28-201ENST00000521340 FUT8Q9BYC5 575 aa3.32□□□□□ -1.88
HMGN1P28-201ENST00000521340 DCLK3Q9C098 648 aa3.32□□□□□ -1.88
HMGN1P28-201ENST00000521340 GAREM1Q9H706 876 aa3.32□□□□□ -1.88
HMGN1P28-201ENST00000521340 HHATLQ9HCP6 504 aa3.32□□□□□ -1.88
HMGN1P28-201ENST00000521340 DNAJC4Q9NNZ3 241 aa3.32□□□□□ -1.88
HMGN1P28-201ENST00000521340 LRWD1Q9UFC0 647 aa3.32□□□□□ -1.88
HMGN1P28-201ENST00000521340 ABT1Q9ULW3 272 aaKnown RBP3.32□□□□□ -1.88
HMGN1P28-201ENST00000521340 LOXL2Q9Y4K0 774 aa3.32□□□□□ -1.88
HMGN1P28-201ENST00000521340 POMT1Q9Y6A1 747 aa3.32□□□□□ -1.88
HMGN1P28-201ENST00000521340 IGSF1Q8N6C5 1336 aa3.32□□□□□ -1.88
HMGN1P28-201ENST00000521340 EVPLQ92817 2033 aa3.31□□□□□ -1.88
HMGN1P28-201ENST00000521340 A0A0U1RQK1 487 aa3.31□□□□□ -1.88
HMGN1P28-201ENST00000521340 ZCWPW2A0A1B0GU75 182 aa3.31□□□□□ -1.88
HMGN1P28-201ENST00000521340 ZNF320A2RRD8 509 aa3.31□□□□□ -1.88
HMGN1P28-201ENST00000521340 OR6C75A6NL08 312 aa3.31□□□□□ -1.88
HMGN1P28-201ENST00000521340 FAM86B1E9PN63 330 aa3.31□□□□□ -1.88
HMGN1P28-201ENST00000521340 HS3ST1O14792 307 aa3.31□□□□□ -1.88
HMGN1P28-201ENST00000521340 WDR46O15213 610 aaKnown RBP3.31□□□□□ -1.88
HMGN1P28-201ENST00000521340 FAM86B2P0C5J1 330 aa3.31□□□□□ -1.88
HMGN1P28-201ENST00000521340 VPREB1P12018 145 aa3.31□□□□□ -1.88
HMGN1P28-201ENST00000521340 MYOD1P15172 320 aa3.31□□□□□ -1.88
HMGN1P28-201ENST00000521340 GJA1P17302 382 aa3.31□□□□□ -1.88
HMGN1P28-201ENST00000521340 PTPN3P26045 913 aa3.31□□□□□ -1.88
HMGN1P28-201ENST00000521340 BMXP51813 675 aa3.31□□□□□ -1.88
HMGN1P28-201ENST00000521340 SNRPEP62304 92 aaKnown RBP3.31□□□□□ -1.88
HMGN1P28-201ENST00000521340 PLIN5Q00G26 463 aa3.31□□□□□ -1.88
HMGN1P28-201ENST00000521340 PPATQ06203 517 aa3.31□□□□□ -1.88
HMGN1P28-201ENST00000521340 MZT1Q08AG7 82 aa3.31□□□□□ -1.88
HMGN1P28-201ENST00000521340 HSPB3Q12988 150 aa3.31□□□□□ -1.88
HMGN1P28-201ENST00000521340 ITGA7Q13683 1181 aa3.31□□□□□ -1.88
HMGN1P28-201ENST00000521340 KRT33BQ14525 404 aa3.31□□□□□ -1.88
HMGN1P28-201ENST00000521340 ETFDHQ16134 617 aa3.31□□□□□ -1.88
HMGN1P28-201ENST00000521340 PKN2Q16513 984 aaKnown RBP3.31□□□□□ -1.88
HMGN1P28-201ENST00000521340 SRSF7Q16629 238 aaKnown RBP eCLIP3.31□□□□□ -1.88
HMGN1P28-201ENST00000521340 LBHQ53QV2 105 aaPredicted RBP3.31□□□□□ -1.88
HMGN1P28-201ENST00000521340 SUSD4Q5VX71 490 aa3.31□□□□□ -1.88
HMGN1P28-201ENST00000521340 FAM91A1Q658Y4 838 aa3.31□□□□□ -1.88
HMGN1P28-201ENST00000521340 TYW3Q6IPR3 259 aaKnown RBP3.31□□□□□ -1.88
HMGN1P28-201ENST00000521340 RAD9BQ6WBX8 426 aa3.31□□□□□ -1.88
HMGN1P28-201ENST00000521340 ADCK2Q7Z695 626 aa3.31□□□□□ -1.88
HMGN1P28-201ENST00000521340 MRPL10Q7Z7H8 261 aaKnown RBP3.31□□□□□ -1.88
HMGN1P28-201ENST00000521340 TMPRSS12Q86WS5 348 aa3.31□□□□□ -1.88
HMGN1P28-201ENST00000521340 IQCA1Q86XH1 822 aa3.31□□□□□ -1.88
HMGN1P28-201ENST00000521340 SIX6OS1Q8N1H7 587 aa3.31□□□□□ -1.88
HMGN1P28-201ENST00000521340 BMPERQ8N8U9 685 aa3.31□□□□□ -1.88
HMGN1P28-201ENST00000521340 C9orf43Q8TAL5 461 aaPredicted RBP3.31□□□□□ -1.88
HMGN1P28-201ENST00000521340 SETD6Q8TBK2 473 aa3.31□□□□□ -1.88
HMGN1P28-201ENST00000521340 AFAP1L1Q8TED9 768 aa3.31□□□□□ -1.88
HMGN1P28-201ENST00000521340 SLC20A1Q8WUM9 679 aa3.31□□□□□ -1.88
HMGN1P28-201ENST00000521340 ATL1Q8WXF7 558 aa3.31□□□□□ -1.88
HMGN1P28-201ENST00000521340 SEPT1Q8WYJ6 367 aa3.31□□□□□ -1.88
HMGN1P28-201ENST00000521340 PIGTQ969N2 578 aa3.31□□□□□ -1.88
HMGN1P28-201ENST00000521340 RPL36ALQ969Q0 106 aaKnown RBP3.31□□□□□ -1.88
HMGN1P28-201ENST00000521340 FAM84BQ96KN1 310 aaPredicted RBP3.31□□□□□ -1.88
HMGN1P28-201ENST00000521340 FAM81BQ96LP2 452 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms