RNA–Protein interactions for RNA: ENST00000519914.5

SDC2-204, Transcript of syndecan 2, humanhuman

TSL 2 BASIC

Gene SDC2, Length 1,318 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-204ENST00000519914 CELA3AP09093 270 aa4.99□□□□□ -1.61
SDC2-204ENST00000519914 ALDOCP09972 364 aaKnown RBP4.99□□□□□ -1.61
SDC2-204ENST00000519914 OR4Q2P0C623 313 aa4.99□□□□□ -1.61
SDC2-204ENST00000519914 ENO3P13929 434 aaPredicted RBP4.99□□□□□ -1.61
SDC2-204ENST00000519914 HNRNPLP14866 589 aaKnown RBP eCLIP4.99□□□□□ -1.61
SDC2-204ENST00000519914 SAT1P21673 171 aa4.99□□□□□ -1.61
SDC2-204ENST00000519914 CCND3P30281 292 aaPredicted RBP4.99□□□□□ -1.61
SDC2-204ENST00000519914 ACVRL1P37023 503 aa4.99□□□□□ -1.61
SDC2-204ENST00000519914 ETFBP38117 255 aa4.99□□□□□ -1.61
SDC2-204ENST00000519914 RPL5P46777 297 aaKnown RBP4.99□□□□□ -1.61
SDC2-204ENST00000519914 OR1G1P47890 313 aa4.99□□□□□ -1.61
SDC2-204ENST00000519914 ACLYP53396 1101 aa4.99□□□□□ -1.61
SDC2-204ENST00000519914 PGGT1BP53609 377 aa4.99□□□□□ -1.61
SDC2-204ENST00000519914 MAXP61244 160 aa4.99□□□□□ -1.61
SDC2-204ENST00000519914 TUBA4AP68366 448 aa4.99□□□□□ -1.61
SDC2-204ENST00000519914 PHEXP78562 749 aa4.99□□□□□ -1.61
SDC2-204ENST00000519914 GNA12Q03113 381 aa4.99□□□□□ -1.61
SDC2-204ENST00000519914 EFEMP1Q12805 493 aa4.99□□□□□ -1.61
SDC2-204ENST00000519914 TAF10Q12962 218 aa4.99□□□□□ -1.61
SDC2-204ENST00000519914 LCP2Q13094 533 aa4.99□□□□□ -1.61
SDC2-204ENST00000519914 LSAMPQ13449 338 aa4.99□□□□□ -1.61
SDC2-204ENST00000519914 SEMA3AQ14563 771 aa4.99□□□□□ -1.61
SDC2-204ENST00000519914 OR4D1Q15615 310 aa4.99□□□□□ -1.61
SDC2-204ENST00000519914 GPR162Q16538 588 aa4.99□□□□□ -1.61
SDC2-204ENST00000519914 SMU1Q2TAY7 513 aa4.99□□□□□ -1.61
SDC2-204ENST00000519914 CNPY1Q3B7I2 92 aa4.99□□□□□ -1.61
SDC2-204ENST00000519914 GRAMD1BQ3KR37 738 aa4.99□□□□□ -1.61
SDC2-204ENST00000519914 MGAT5BQ3V5L5 792 aa4.99□□□□□ -1.61
SDC2-204ENST00000519914 CTXN3Q4LDR2 81 aa4.99□□□□□ -1.61
SDC2-204ENST00000519914 PDCD4Q53EL6 469 aaKnown RBP4.99□□□□□ -1.61
SDC2-204ENST00000519914 AGKQ53H12 422 aa4.99□□□□□ -1.61
SDC2-204ENST00000519914 INTS11Q5TA45 600 aaKnown RBP4.99□□□□□ -1.61
SDC2-204ENST00000519914 THEMIS2Q5TEJ8 643 aa4.99□□□□□ -1.61
SDC2-204ENST00000519914 RNF220Q5VTB9 566 aa4.99□□□□□ -1.61
SDC2-204ENST00000519914 RAP1GAP2Q684P5 730 aa4.99□□□□□ -1.61
SDC2-204ENST00000519914 NXNQ6DKJ4 435 aa4.99□□□□□ -1.61
SDC2-204ENST00000519914 SLC8B1Q6J4K2 584 aa4.99□□□□□ -1.61
SDC2-204ENST00000519914 LCN8Q6JVE9 175 aa4.99□□□□□ -1.61
SDC2-204ENST00000519914 PPP4R4Q6NUP7 873 aa4.99□□□□□ -1.61
SDC2-204ENST00000519914 METTL2BQ6P1Q9 378 aaKnown RBP4.99□□□□□ -1.61
SDC2-204ENST00000519914 LCNL1Q6ZST4 164 aa4.99□□□□□ -1.61
SDC2-204ENST00000519914 ANKS3Q6ZW76 656 aa4.99□□□□□ -1.61
SDC2-204ENST00000519914 ERMP1Q7Z2K6 904 aa4.99□□□□□ -1.61
SDC2-204ENST00000519914 PTAR1Q7Z6K3 402 aaPredicted RBP4.99□□□□□ -1.61
SDC2-204ENST00000519914 TFAP2DQ7Z6R9 452 aa4.99□□□□□ -1.61
SDC2-204ENST00000519914 RNF180Q86T96 592 aa4.99□□□□□ -1.61
SDC2-204ENST00000519914 CARM1Q86X55 608 aa4.99□□□□□ -1.61
SDC2-204ENST00000519914 PTRH1Q86Y79 214 aaKnown RBP4.99□□□□□ -1.61
SDC2-204ENST00000519914 NPAS4Q8IUM7 802 aa4.99□□□□□ -1.61
SDC2-204ENST00000519914 CHERPQ8IWX8 916 aaKnown RBP4.99□□□□□ -1.61
SDC2-204ENST00000519914 SPATA6LQ8N4H0 392 aa4.99□□□□□ -1.61
SDC2-204ENST00000519914 CARNMT1Q8N4J0 409 aa4.99□□□□□ -1.61
SDC2-204ENST00000519914 PTGR2Q8N8N7 351 aaPredicted RBP4.99□□□□□ -1.61
SDC2-204ENST00000519914 MFSD2AQ8NA29 543 aa4.99□□□□□ -1.61
SDC2-204ENST00000519914 ZBTB8BQ8NAP8 495 aaPredicted RBP4.99□□□□□ -1.61
SDC2-204ENST00000519914 PCYOX1LQ8NBM8 494 aa4.99□□□□□ -1.61
SDC2-204ENST00000519914 KCT2Q8NC54 265 aa4.99□□□□□ -1.61
SDC2-204ENST00000519914 PAPD5Q8NDF8 572 aaKnown RBP4.99□□□□□ -1.61
SDC2-204ENST00000519914 STAG3L4Q8TBR4 150 aa4.99□□□□□ -1.61
SDC2-204ENST00000519914 AGR3Q8TD06 166 aa4.99□□□□□ -1.61
SDC2-204ENST00000519914 UBE2FQ969M7 185 aa4.99□□□□□ -1.61
SDC2-204ENST00000519914 SLCO4A1Q96BD0 722 aa4.99□□□□□ -1.61
SDC2-204ENST00000519914 PABPC5Q96DU9 382 aaKnown RBP4.99□□□□□ -1.61
SDC2-204ENST00000519914 MYEOVQ96EZ4 313 aa4.99□□□□□ -1.61
SDC2-204ENST00000519914 DNAJC1Q96KC8 554 aaKnown RBP4.99□□□□□ -1.61
SDC2-204ENST00000519914 CASD1Q96PB1 797 aa4.99□□□□□ -1.61
SDC2-204ENST00000519914 NDNQ99608 321 aa4.99□□□□□ -1.61
SDC2-204ENST00000519914 PKP2Q99959 881 aa4.99□□□□□ -1.61
SDC2-204ENST00000519914 SEMA3CQ99985 751 aa4.99□□□□□ -1.61
SDC2-204ENST00000519914 OSBPL11Q9BXB4 747 aa4.99□□□□□ -1.61
SDC2-204ENST00000519914 TDRD1Q9BXT4 1180 aaKnown RBP4.99□□□□□ -1.61
SDC2-204ENST00000519914 TRIM54Q9BYV2 358 aa4.99□□□□□ -1.61
SDC2-204ENST00000519914 TRIM15Q9C019 465 aa4.99□□□□□ -1.61
SDC2-204ENST00000519914 BRINP2Q9C0B6 783 aa4.99□□□□□ -1.61
SDC2-204ENST00000519914 YIPF3Q9GZM5 350 aa4.99□□□□□ -1.61
SDC2-204ENST00000519914 ALG9Q9H6U8 611 aa4.99□□□□□ -1.61
SDC2-204ENST00000519914 TRMT13Q9NUP7 481 aaKnown RBP4.99□□□□□ -1.61
SDC2-204ENST00000519914 C19orf73Q9NVV2 129 aa4.99□□□□□ -1.61
SDC2-204ENST00000519914 UBAP1Q9NZ09 502 aa4.99□□□□□ -1.61
SDC2-204ENST00000519914 DNMT3BQ9UBC3 853 aaKnown RBP4.99□□□□□ -1.61
SDC2-204ENST00000519914 NUDT5Q9UKK9 219 aa4.99□□□□□ -1.61
SDC2-204ENST00000519914 ZNF510Q9Y2H8 683 aa4.99□□□□□ -1.61
SDC2-204ENST00000519914 TMEM98Q9Y2Y6 226 aa4.99□□□□□ -1.61
SDC2-204ENST00000519914 AP4S1Q9Y587 144 aa4.99□□□□□ -1.61
SDC2-204ENST00000519914 DNAJC15Q9Y5T4 150 aa4.99□□□□□ -1.61
SDC2-204ENST00000519914 BACE2Q9Y5Z0 518 aa4.99□□□□□ -1.61
SDC2-204ENST00000519914 AP4B1Q9Y6B7 739 aa4.99□□□□□ -1.61
SDC2-204ENST00000519914 A0A1B0GVM2 712 aa4.98□□□□□ -1.61
SDC2-204ENST00000519914 TMEM221A6NGB7 291 aa4.98□□□□□ -1.61
SDC2-204ENST00000519914 SLC38A8A6NNN8 435 aa4.98□□□□□ -1.61
SDC2-204ENST00000519914 H3BMM5 538 aa4.98□□□□□ -1.61
SDC2-204ENST00000519914 FXYD1O00168 92 aa4.98□□□□□ -1.61
SDC2-204ENST00000519914 IFRD1O00458 451 aaPredicted RBP4.98□□□□□ -1.61
SDC2-204ENST00000519914 ENPP3O14638 875 aa4.98□□□□□ -1.61
SDC2-204ENST00000519914 PFDN6O15212 129 aa4.98□□□□□ -1.61
SDC2-204ENST00000519914 CFLARO15519 480 aa4.98□□□□□ -1.61
SDC2-204ENST00000519914 TLR5O60602 858 aa4.98□□□□□ -1.61
SDC2-204ENST00000519914 EEDO75530 441 aaKnown RBP4.98□□□□□ -1.61
SDC2-204ENST00000519914 TPPPO94811 219 aa4.98□□□□□ -1.61
SDC2-204ENST00000519914 SUPT7LO94864 414 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms