RNA–Protein interactions for RNA: ENST00000517400.5

LINC00534-201, long intergenic non-protein coding RNA 534, humanhuman

TSL 2 BASIC

Gene LINC00534, Length 793 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00534-201ENST00000517400 HIST2H2BCQ6DN03 193 aa4.4□□□□□ -1.71
LINC00534-201ENST00000517400 HIST2H2BDQ6DRA6 164 aa4.4□□□□□ -1.71
LINC00534-201ENST00000517400 TATDN1Q6P1N9 297 aa4.4□□□□□ -1.71
LINC00534-201ENST00000517400 CXCL17Q6UXB2 119 aa4.4□□□□□ -1.71
LINC00534-201ENST00000517400 SZRD1Q7Z422 152 aa4.4□□□□□ -1.71
LINC00534-201ENST00000517400 RNF168Q8IYW5 571 aaPredicted RBP4.4□□□□□ -1.71
LINC00534-201ENST00000517400 SPATA6LQ8N4H0 392 aa4.4□□□□□ -1.71
LINC00534-201ENST00000517400 IGSF8Q969P0 613 aa4.4□□□□□ -1.71
LINC00534-201ENST00000517400 FCRL4Q96PJ5 515 aa4.4□□□□□ -1.71
LINC00534-201ENST00000517400 SH3GL2Q99962 352 aa4.4□□□□□ -1.71
LINC00534-201ENST00000517400 SLF1Q9BQI6 1058 aa4.4□□□□□ -1.71
LINC00534-201ENST00000517400 TRPV6Q9H1D0 765 aa4.4□□□□□ -1.71
LINC00534-201ENST00000517400 VCPKMTQ9H867 229 aa4.4□□□□□ -1.71
LINC00534-201ENST00000517400 RAVER2Q9HCJ3 691 aaKnown RBP4.4□□□□□ -1.71
LINC00534-201ENST00000517400 LTB4R2Q9NPC1 389 aa4.4□□□□□ -1.71
LINC00534-201ENST00000517400 HINT3Q9NQE9 182 aaKnown RBP4.4□□□□□ -1.71
LINC00534-201ENST00000517400 RNF7Q9UBF6 113 aa4.4□□□□□ -1.71
LINC00534-201ENST00000517400 DBNLQ9UJU6 430 aaKnown RBP4.4□□□□□ -1.71
LINC00534-201ENST00000517400 RCOR1Q9UKL0 485 aa4.4□□□□□ -1.71
LINC00534-201ENST00000517400 EXOC6BQ9Y2D4 811 aa4.4□□□□□ -1.71
LINC00534-201ENST00000517400 PAM16Q9Y3D7 125 aa4.4□□□□□ -1.71
LINC00534-201ENST00000517400 DDX49Q9Y6V7 483 aaKnown RBP4.4□□□□□ -1.71
LINC00534-201ENST00000517400 MAU2Q9Y6X3 613 aa4.4□□□□□ -1.71
LINC00534-201ENST00000517400 PIEZO1Q92508 2521 aa4.4□□□□□ -1.71
LINC00534-201ENST00000517400 UMODL1Q5DID0 1318 aa4.4□□□□□ -1.71
LINC00534-201ENST00000517400 TRIP12Q14669 1992 aaPredicted RBP4.4□□□□□ -1.71
LINC00534-201ENST00000517400 TCF20Q9UGU0 1960 aaKnown RBP4.4□□□□□ -1.71
LINC00534-201ENST00000517400 CHD7Q9P2D1 2997 aa4.39□□□□□ -1.71
LINC00534-201ENST00000517400 MUC6Q6W4X9 2439 aa4.39□□□□□ -1.71
LINC00534-201ENST00000517400 CDRT15L2A8MXV6 281 aa4.39□□□□□ -1.71
LINC00534-201ENST00000517400 BTBD18B2RXH4 712 aa4.39□□□□□ -1.71
LINC00534-201ENST00000517400 TIMM23O14925 209 aa4.39□□□□□ -1.71
LINC00534-201ENST00000517400 WDR46O15213 610 aaKnown RBP4.39□□□□□ -1.71
LINC00534-201ENST00000517400 HSPA12AO43301 675 aa4.39□□□□□ -1.71
LINC00534-201ENST00000517400 DAB1O75553 588 aa4.39□□□□□ -1.71
LINC00534-201ENST00000517400 JRKO75564 520 aa4.39□□□□□ -1.71
LINC00534-201ENST00000517400 PRDM1O75626 825 aa4.39□□□□□ -1.71
LINC00534-201ENST00000517400 CRYABP02511 175 aaKnown RBP4.39□□□□□ -1.71
LINC00534-201ENST00000517400 CA3P07451 260 aa4.39□□□□□ -1.71
LINC00534-201ENST00000517400 TMEM11P17152 192 aa4.39□□□□□ -1.71
LINC00534-201ENST00000517400 GABRB1P18505 474 aa4.39□□□□□ -1.71
LINC00534-201ENST00000517400 MCM3P25205 808 aa4.39□□□□□ -1.71
LINC00534-201ENST00000517400 HNRNPH1P31943 449 aaKnown RBP4.39□□□□□ -1.71
LINC00534-201ENST00000517400 RPL3P39023 403 aaKnown RBP4.39□□□□□ -1.71
LINC00534-201ENST00000517400 AMTP48728 403 aa4.39□□□□□ -1.71
LINC00534-201ENST00000517400 MXI1P50539 228 aa4.39□□□□□ -1.71
LINC00534-201ENST00000517400 SNAP25P60880 206 aa4.39□□□□□ -1.71
LINC00534-201ENST00000517400 TFAP4Q01664 338 aa4.39□□□□□ -1.71
LINC00534-201ENST00000517400 KRTAP1-1Q07627 177 aa4.39□□□□□ -1.71
LINC00534-201ENST00000517400 EPS8Q12929 822 aa4.39□□□□□ -1.71
LINC00534-201ENST00000517400 CHAF1BQ13112 559 aa4.39□□□□□ -1.71
LINC00534-201ENST00000517400 NAB2Q15742 525 aa4.39□□□□□ -1.71
LINC00534-201ENST00000517400 GGNBP1Q5YKI7 109 aa4.39□□□□□ -1.71
LINC00534-201ENST00000517400 PMS2CLQ68D20 193 aa4.39□□□□□ -1.71
LINC00534-201ENST00000517400 C16orf54Q6UWD8 224 aa4.39□□□□□ -1.71
LINC00534-201ENST00000517400 PQLC2Q6ZP29 291 aa4.39□□□□□ -1.71
LINC00534-201ENST00000517400 SEPT14Q6ZU15 432 aa4.39□□□□□ -1.71
LINC00534-201ENST00000517400 ARMCX2Q7L311 632 aa4.39□□□□□ -1.71
LINC00534-201ENST00000517400 FBXO16Q8IX29 292 aaPredicted RBP4.39□□□□□ -1.71
LINC00534-201ENST00000517400 CCDC13Q8IYE1 715 aa4.39□□□□□ -1.71
LINC00534-201ENST00000517400 HACE1Q8IYU2 909 aa4.39□□□□□ -1.71
LINC00534-201ENST00000517400 PRR26Q8N8Z3 221 aa4.39□□□□□ -1.71
LINC00534-201ENST00000517400 NEXN-AS1Q8NBZ9 246 aa4.39□□□□□ -1.71
LINC00534-201ENST00000517400 OR14L1PQ8NHC6 308 aa4.39□□□□□ -1.71
LINC00534-201ENST00000517400 RRNAD1Q96FB5 475 aaKnown RBP4.39□□□□□ -1.71
LINC00534-201ENST00000517400 CCDC34Q96HJ3 373 aa4.39□□□□□ -1.71
LINC00534-201ENST00000517400 OR2A14Q96R47 310 aa4.39□□□□□ -1.71
LINC00534-201ENST00000517400 NUDT16L1Q9BRJ7 211 aaKnown RBP4.39□□□□□ -1.71
LINC00534-201ENST00000517400 DCLK3Q9C098 648 aa4.39□□□□□ -1.71
LINC00534-201ENST00000517400 KCNN2Q9H2S1 579 aa4.39□□□□□ -1.71
LINC00534-201ENST00000517400 ADD3Q9UEY8 706 aaKnown RBP4.39□□□□□ -1.71
LINC00534-201ENST00000517400 TBX21Q9UL17 535 aa4.39□□□□□ -1.71
LINC00534-201ENST00000517400 INSL5Q9Y5Q6 135 aa4.39□□□□□ -1.71
LINC00534-201ENST00000517400 SIPA1L1O43166 1804 aa4.39□□□□□ -1.71
LINC00534-201ENST00000517400 LTBP2Q14767 1821 aa4.39□□□□□ -1.71
LINC00534-201ENST00000517400 FRMPD3Q5JV73 1810 aa4.39□□□□□ -1.71
LINC00534-201ENST00000517400 REV3LO60673 3130 aa4.38□□□□□ -1.71
LINC00534-201ENST00000517400 hCG_1807616A0A1W2PRN6 198 aa4.38□□□□□ -1.71
LINC00534-201ENST00000517400 DYTNA2CJ06 578 aa4.38□□□□□ -1.71
LINC00534-201ENST00000517400 CD8B2A6NJW9 211 aa4.38□□□□□ -1.71
LINC00534-201ENST00000517400 INO80B-WBP1J3KQ70 363 aa4.38□□□□□ -1.71
LINC00534-201ENST00000517400 DUSP11O75319 330 aaKnown RBP4.38□□□□□ -1.71
LINC00534-201ENST00000517400 CYC1P08574 325 aa4.38□□□□□ -1.71
LINC00534-201ENST00000517400 ACTN1P12814 892 aa4.38□□□□□ -1.71
LINC00534-201ENST00000517400 ARRB2P32121 409 aa4.38□□□□□ -1.71
LINC00534-201ENST00000517400 PIK3CAP42336 1068 aa4.38□□□□□ -1.71
LINC00534-201ENST00000517400 TDO2P48775 406 aa4.38□□□□□ -1.71
LINC00534-201ENST00000517400 CLCN3P51790 818 aa4.38□□□□□ -1.71
LINC00534-201ENST00000517400 GALCP54803 685 aa4.38□□□□□ -1.71
LINC00534-201ENST00000517400 CNTN2Q02246 1040 aa4.38□□□□□ -1.71
LINC00534-201ENST00000517400 DSC1Q08554 894 aa4.38□□□□□ -1.71
LINC00534-201ENST00000517400 GRIK2Q13002 908 aa4.38□□□□□ -1.71
LINC00534-201ENST00000517400 IRF3Q14653 427 aa4.38□□□□□ -1.71
LINC00534-201ENST00000517400 EFNB3Q15768 340 aa4.38□□□□□ -1.71
LINC00534-201ENST00000517400 CCDC96Q2M329 555 aa4.38□□□□□ -1.71
LINC00534-201ENST00000517400 ASTE1Q2TB18 679 aaPredicted RBP4.38□□□□□ -1.71
LINC00534-201ENST00000517400 PCGF3Q3KNV8 242 aa4.38□□□□□ -1.71
LINC00534-201ENST00000517400 ZSCAN23Q3MJ62 389 aa4.38□□□□□ -1.71
LINC00534-201ENST00000517400 TDRD12Q587J7 1177 aaKnown RBP4.38□□□□□ -1.71
LINC00534-201ENST00000517400 RAB41Q5JT25 222 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms