RNA–Protein interactions for RNA: ENST00000516768.1

SCARNA20-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 131 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20-201ENST00000516768 UBXN7O94888 489 aa10.9□□□□□ -0.66
SCARNA20-201ENST00000516768 MTHFD1P11586 935 aaKnown RBP10.9□□□□□ -0.66
SCARNA20-201ENST00000516768 PLOD1Q02809 727 aaPredicted RBP10.9□□□□□ -0.66
SCARNA20-201ENST00000516768 CBLBQ13191 982 aa10.9□□□□□ -0.66
SCARNA20-201ENST00000516768 EIF3IQ13347 325 aaKnown RBP10.9□□□□□ -0.66
SCARNA20-201ENST00000516768 TRA2AQ13595 282 aaKnown RBP eCLIP10.9□□□□□ -0.66
SCARNA20-201ENST00000516768 GPR18Q14330 331 aa10.9□□□□□ -0.66
SCARNA20-201ENST00000516768 MSS51Q4VC12 460 aa10.9□□□□□ -0.66
SCARNA20-201ENST00000516768 NEPROQ6NW34 567 aa10.9□□□□□ -0.66
SCARNA20-201ENST00000516768 IGF2-ASQ6U949 168 aa10.9□□□□□ -0.66
SCARNA20-201ENST00000516768 RAB11FIP2Q7L804 512 aa10.9□□□□□ -0.66
SCARNA20-201ENST00000516768 ZNF572Q7Z3I7 529 aaPredicted RBP10.9□□□□□ -0.66
SCARNA20-201ENST00000516768 C16orf45Q96MC5 204 aaPredicted RBP10.9□□□□□ -0.66
SCARNA20-201ENST00000516768 C12orf66Q96MD2 445 aa10.9□□□□□ -0.66
SCARNA20-201ENST00000516768 EBNA1BP2Q99848 306 aaKnown RBP10.9□□□□□ -0.66
SCARNA20-201ENST00000516768 TRIM56Q9BRZ2 755 aaKnown RBP10.9□□□□□ -0.66
SCARNA20-201ENST00000516768 TRIM51Q9BSJ1 452 aa10.9□□□□□ -0.66
SCARNA20-201ENST00000516768 P2RY12Q9H244 342 aa10.9□□□□□ -0.66
SCARNA20-201ENST00000516768 COG4Q9H9E3 785 aa10.9□□□□□ -0.66
SCARNA20-201ENST00000516768 EPB41L5Q9HCM4 733 aa10.9□□□□□ -0.66
SCARNA20-201ENST00000516768 OGFRQ9NZT2 677 aa10.9□□□□□ -0.66
SCARNA20-201ENST00000516768 FAM8A1Q9UBU6 413 aa10.9□□□□□ -0.66
SCARNA20-201ENST00000516768 CDC23Q9UJX2 597 aa10.9□□□□□ -0.66
SCARNA20-201ENST00000516768 SATB2Q9UPW6 733 aa10.9□□□□□ -0.66
SCARNA20-201ENST00000516768 CFAP20Q9Y6A4 193 aaKnown RBP10.9□□□□□ -0.66
SCARNA20-201ENST00000516768 MAD1L1Q9Y6D9 718 aa10.9□□□□□ -0.66
SCARNA20-201ENST00000516768 RPS6KL1Q9Y6S9 549 aa10.9□□□□□ -0.66
SCARNA20-201ENST00000516768 COLEC10Q9Y6Z7 277 aa10.9□□□□□ -0.66
SCARNA20-201ENST00000516768 BHMG1C9JSJ3 638 aaPredicted RBP10.89□□□□□ -0.67
SCARNA20-201ENST00000516768 GOLGA8KD6RF30 607 aa10.89□□□□□ -0.67
SCARNA20-201ENST00000516768 GOLGA8TH3BQL2 631 aa10.89□□□□□ -0.67
SCARNA20-201ENST00000516768 PLD2O14939 933 aa10.89□□□□□ -0.67
SCARNA20-201ENST00000516768 HGSO14964 777 aaPredicted RBP10.89□□□□□ -0.67
SCARNA20-201ENST00000516768 PFDN6O15212 129 aa10.89□□□□□ -0.67
SCARNA20-201ENST00000516768 DUX1O43812 170 aa10.89□□□□□ -0.67
SCARNA20-201ENST00000516768 SEC31AO94979 1220 aaKnown RBP10.89□□□□□ -0.67
SCARNA20-201ENST00000516768 S1PR4O95977 384 aa10.89□□□□□ -0.67
SCARNA20-201ENST00000516768 SLC35G4P0C7Q5 338 aa10.89□□□□□ -0.67
SCARNA20-201ENST00000516768 AMD1P17707 334 aa10.89□□□□□ -0.67
SCARNA20-201ENST00000516768 RPS3P23396 243 aaKnown RBP eCLIP10.89□□□□□ -0.67
SCARNA20-201ENST00000516768 ACADLP28330 430 aa10.89□□□□□ -0.67
SCARNA20-201ENST00000516768 NDUFS1P28331 727 aa10.89□□□□□ -0.67
SCARNA20-201ENST00000516768 CCR7P32248 378 aa10.89□□□□□ -0.67
SCARNA20-201ENST00000516768 CSF2RBP32927 897 aa10.89□□□□□ -0.67
SCARNA20-201ENST00000516768 ITGA8P53708 1063 aa10.89□□□□□ -0.67
SCARNA20-201ENST00000516768 ADARP55265 1226 aaKnown RBP10.89□□□□□ -0.67
SCARNA20-201ENST00000516768 ERVPABLB-1P60509 514 aa10.89□□□□□ -0.67
SCARNA20-201ENST00000516768 GABREP78334 506 aa10.89□□□□□ -0.67
SCARNA20-201ENST00000516768 LONRF1Q17RB8 773 aa10.89□□□□□ -0.67
SCARNA20-201ENST00000516768 TYSND1Q2T9J0 566 aa10.89□□□□□ -0.67
SCARNA20-201ENST00000516768 MAP9Q49MG5 647 aa10.89□□□□□ -0.67
SCARNA20-201ENST00000516768 C3orf38Q5JPI3 329 aa10.89□□□□□ -0.67
SCARNA20-201ENST00000516768 PHF19Q5T6S3 580 aa10.89□□□□□ -0.67
SCARNA20-201ENST00000516768 CENPUQ71F23 418 aa10.89□□□□□ -0.67
SCARNA20-201ENST00000516768 ARHGAP22Q7Z5H3 698 aa10.89□□□□□ -0.67
SCARNA20-201ENST00000516768 LRRC6Q86X45 466 aa10.89□□□□□ -0.67
SCARNA20-201ENST00000516768 PROSER1Q86XN7 944 aa10.89□□□□□ -0.67
SCARNA20-201ENST00000516768 PLXDC1Q8IUK5 500 aa10.89□□□□□ -0.67
SCARNA20-201ENST00000516768 CILP2Q8IUL8 1156 aa10.89□□□□□ -0.67
SCARNA20-201ENST00000516768 PDIK1LQ8N165 341 aa10.89□□□□□ -0.67
SCARNA20-201ENST00000516768 FBXO39Q8N4B4 442 aa10.89□□□□□ -0.67
SCARNA20-201ENST00000516768 PHC3Q8NDX5 983 aa10.89□□□□□ -0.67
SCARNA20-201ENST00000516768 ELMO1Q92556 727 aa10.89□□□□□ -0.67
SCARNA20-201ENST00000516768 TFGQ92734 400 aaPredicted RBP10.89□□□□□ -0.67
SCARNA20-201ENST00000516768 FGF11Q92914 225 aa10.89□□□□□ -0.67
SCARNA20-201ENST00000516768 TRIM44Q96DX7 344 aaPredicted RBP10.89□□□□□ -0.67
SCARNA20-201ENST00000516768 STAMBPL1Q96FJ0 436 aa10.89□□□□□ -0.67
SCARNA20-201ENST00000516768 SNF8Q96H20 258 aa10.89□□□□□ -0.67
SCARNA20-201ENST00000516768 BIRC8Q96P09 236 aa10.89□□□□□ -0.67
SCARNA20-201ENST00000516768 CMKLR1Q99788 373 aa10.89□□□□□ -0.67
SCARNA20-201ENST00000516768 ERP44Q9BS26 406 aa10.89□□□□□ -0.67
SCARNA20-201ENST00000516768 NAT9Q9BTE0 207 aa10.89□□□□□ -0.67
SCARNA20-201ENST00000516768 TRIM31Q9BZY9 425 aa10.89□□□□□ -0.67
SCARNA20-201ENST00000516768 RAB33BQ9H082 229 aa10.89□□□□□ -0.67
SCARNA20-201ENST00000516768 KIR3DX1Q9H7L2 352 aa10.89□□□□□ -0.67
SCARNA20-201ENST00000516768 IMP3Q9NV31 184 aaKnown RBP10.89□□□□□ -0.67
SCARNA20-201ENST00000516768 TMEM9Q9P0T7 183 aa10.89□□□□□ -0.67
SCARNA20-201ENST00000516768 EPHA6Q9UF33 1036 aa10.89□□□□□ -0.67
SCARNA20-201ENST00000516768 ZMIZ1Q9ULJ6 1067 aa10.89□□□□□ -0.67
SCARNA20-201ENST00000516768 HEBP2Q9Y5Z4 205 aa10.89□□□□□ -0.67
SCARNA20-201ENST00000516768 COL27A1Q8IZC6 1860 aaPredicted RBP10.89□□□□□ -0.67
SCARNA20-201ENST00000516768 URB1O60287 2271 aaKnown RBP10.88□□□□□ -0.67
SCARNA20-201ENST00000516768 ASPMQ8IZT6 3477 aa10.88□□□□□ -0.67
SCARNA20-201ENST00000516768 IQCF5A8MTL0 148 aa10.88□□□□□ -0.67
SCARNA20-201ENST00000516768 IFRD1O00458 451 aaPredicted RBP10.88□□□□□ -0.67
SCARNA20-201ENST00000516768 BRINP1O60477 761 aa10.88□□□□□ -0.67
SCARNA20-201ENST00000516768 GPC4O75487 556 aa10.88□□□□□ -0.67
SCARNA20-201ENST00000516768 URI1O94763 535 aaPredicted RBP10.88□□□□□ -0.67
SCARNA20-201ENST00000516768 SLCO2B1O94956 709 aa10.88□□□□□ -0.67
SCARNA20-201ENST00000516768 TTC4O95801 387 aa10.88□□□□□ -0.67
SCARNA20-201ENST00000516768 C9P02748 559 aa10.88□□□□□ -0.67
SCARNA20-201ENST00000516768 THRAP10827 490 aa10.88□□□□□ -0.67
SCARNA20-201ENST00000516768 TYRP1P17643 537 aa10.88□□□□□ -0.67
SCARNA20-201ENST00000516768 OGNP20774 298 aaKnown RBP10.88□□□□□ -0.67
SCARNA20-201ENST00000516768 MPSTP25325 297 aa10.88□□□□□ -0.67
SCARNA20-201ENST00000516768 AOAHP28039 575 aa10.88□□□□□ -0.67
SCARNA20-201ENST00000516768 RBMS1P29558 406 aaKnown RBP10.88□□□□□ -0.67
SCARNA20-201ENST00000516768 MLLT3P42568 568 aaPredicted RBP10.88□□□□□ -0.67
SCARNA20-201ENST00000516768 RPL21P46778 160 aaKnown RBP10.88□□□□□ -0.67
SCARNA20-201ENST00000516768 PREPP48147 710 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms