RNA–Protein interactions for RNA: ENST00000515397.1

VCAN-212, Transcript of versican, humanhuman

TSL 2

Gene VCAN, Length 536 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-212ENST00000515397 ADRA1DP25100 572 aa11.23□□□□□ -0.61
VCAN-212ENST00000515397 MGAT1P26572 445 aa11.23□□□□□ -0.61
VCAN-212ENST00000515397 NMBRP28336 390 aa11.23□□□□□ -0.61
VCAN-212ENST00000515397 FOXN2P32314 431 aa11.23□□□□□ -0.61
VCAN-212ENST00000515397 PRLHRP49683 370 aa11.23□□□□□ -0.61
VCAN-212ENST00000515397 FOXM1Q08050 763 aa11.23□□□□□ -0.61
VCAN-212ENST00000515397 GPS1Q13098 491 aa11.23□□□□□ -0.61
VCAN-212ENST00000515397 PRKG2Q13237 762 aa11.23□□□□□ -0.61
VCAN-212ENST00000515397 KRT33BQ14525 404 aa11.23□□□□□ -0.61
VCAN-212ENST00000515397 PLCL1Q15111 1095 aa11.23□□□□□ -0.61
VCAN-212ENST00000515397 CLPPQ16740 277 aaPredicted RBP11.23□□□□□ -0.61
VCAN-212ENST00000515397 CACHD1Q5VU97 1274 aa11.23□□□□□ -0.61
VCAN-212ENST00000515397 ANKRD22Q5VYY1 191 aa11.23□□□□□ -0.61
VCAN-212ENST00000515397 KIAA1614Q5VZ46 1190 aa11.23□□□□□ -0.61
VCAN-212ENST00000515397 DRICH1Q6PGQ1 229 aaPredicted RBP11.23□□□□□ -0.61
VCAN-212ENST00000515397 CERS6Q6ZMG9 384 aa11.23□□□□□ -0.61
VCAN-212ENST00000515397 ZNF534Q76KX8 674 aa11.23□□□□□ -0.61
VCAN-212ENST00000515397 PLXDC1Q8IUK5 500 aa11.23□□□□□ -0.61
VCAN-212ENST00000515397 BMPERQ8N8U9 685 aa11.23□□□□□ -0.61
VCAN-212ENST00000515397 OR4E2Q8NGC2 313 aa11.23□□□□□ -0.61
VCAN-212ENST00000515397 UBE2Q2Q8WVN8 375 aa11.23□□□□□ -0.61
VCAN-212ENST00000515397 TMEM159Q96B96 161 aa11.23□□□□□ -0.61
VCAN-212ENST00000515397 C9orf72Q96LT7 481 aa11.23□□□□□ -0.61
VCAN-212ENST00000515397 FERD3LQ96RJ6 166 aa11.23□□□□□ -0.61
VCAN-212ENST00000515397 DPYSL5Q9BPU6 564 aa11.23□□□□□ -0.61
VCAN-212ENST00000515397 TRIM56Q9BRZ2 755 aaKnown RBP11.23□□□□□ -0.61
VCAN-212ENST00000515397 CCM2Q9BSQ5 444 aa11.23□□□□□ -0.61
VCAN-212ENST00000515397 UCK1Q9HA47 277 aa11.23□□□□□ -0.61
VCAN-212ENST00000515397 MARCH4Q9P2E8 410 aaPredicted RBP11.23□□□□□ -0.61
VCAN-212ENST00000515397 ACSL5Q9ULC5 683 aa11.23□□□□□ -0.61
VCAN-212ENST00000515397 PYCARDQ9ULZ3 195 aa11.23□□□□□ -0.61
VCAN-212ENST00000515397 TCAF1Q9Y4C2 921 aa11.23□□□□□ -0.61
VCAN-212ENST00000515397 PIEZO2Q9H5I5 2752 aa11.22□□□□□ -0.61
VCAN-212ENST00000515397 TEX51A0A1B0GUA7 166 aa11.22□□□□□ -0.61
VCAN-212ENST00000515397 OR6C74A6NCV1 312 aa11.22□□□□□ -0.61
VCAN-212ENST00000515397 IQCF5A8MTL0 148 aa11.22□□□□□ -0.61
VCAN-212ENST00000515397 GOLGA8MH3BSY2 632 aa11.22□□□□□ -0.61
VCAN-212ENST00000515397 KRT14P02533 472 aa11.22□□□□□ -0.61
VCAN-212ENST00000515397 F7P08709 466 aaPredicted RBP11.22□□□□□ -0.61
VCAN-212ENST00000515397 SLC35G4P0C7Q5 338 aa11.22□□□□□ -0.61
VCAN-212ENST00000515397 PSMA3P25788 255 aa11.22□□□□□ -0.61
VCAN-212ENST00000515397 MLLT3P42568 568 aaPredicted RBP11.22□□□□□ -0.61
VCAN-212ENST00000515397 TMPRSS3P57727 454 aa11.22□□□□□ -0.61
VCAN-212ENST00000515397 CYP4F2P78329 520 aa11.22□□□□□ -0.61
VCAN-212ENST00000515397 MC2RQ01718 297 aa11.22□□□□□ -0.61
VCAN-212ENST00000515397 KCNAB1Q14722 419 aa11.22□□□□□ -0.61
VCAN-212ENST00000515397 TMEM164Q5U3C3 297 aa11.22□□□□□ -0.61
VCAN-212ENST00000515397 CAPRIN2Q6IMN6 1127 aaKnown RBP11.22□□□□□ -0.61
VCAN-212ENST00000515397 CCDC81Q6ZN84 652 aa11.22□□□□□ -0.61
VCAN-212ENST00000515397 GPR155Q7Z3F1 870 aa11.22□□□□□ -0.61
VCAN-212ENST00000515397 SPNS2Q8IVW8 549 aa11.22□□□□□ -0.61
VCAN-212ENST00000515397 UNC5BQ8IZJ1 945 aa11.22□□□□□ -0.61
VCAN-212ENST00000515397 MPP5Q8N3R9 675 aa11.22□□□□□ -0.61
VCAN-212ENST00000515397 RASGEF1CQ8N431 466 aa11.22□□□□□ -0.61
VCAN-212ENST00000515397 AVL9Q8NBF6 648 aa11.22□□□□□ -0.61
VCAN-212ENST00000515397 OR4L1Q8NH43 312 aa11.22□□□□□ -0.61
VCAN-212ENST00000515397 HM13Q8TCT9 377 aa11.22□□□□□ -0.61
VCAN-212ENST00000515397 PBKQ96KB5 322 aa11.22□□□□□ -0.61
VCAN-212ENST00000515397 LINC00615Q96LM1 132 aaPredicted RBP11.22□□□□□ -0.61
VCAN-212ENST00000515397 CCNL2Q96S94 520 aaPredicted RBP11.22□□□□□ -0.61
VCAN-212ENST00000515397 OSBPL9Q96SU4 736 aa11.22□□□□□ -0.61
VCAN-212ENST00000515397 MAP3K3Q99759 626 aa11.22□□□□□ -0.61
VCAN-212ENST00000515397 XKR8Q9H6D3 395 aa11.22□□□□□ -0.61
VCAN-212ENST00000515397 COG4Q9H9E3 785 aa11.22□□□□□ -0.61
VCAN-212ENST00000515397 HRASLS2Q9NWW9 162 aa11.22□□□□□ -0.61
VCAN-212ENST00000515397 SLC24A2Q9UI40 661 aa11.22□□□□□ -0.61
VCAN-212ENST00000515397 LOC400499M0QZD8 3231 aa11.22□□□□□ -0.61
VCAN-212ENST00000515397 BAHCC1Q9P281 2608 aa11.22□□□□□ -0.61
VCAN-212ENST00000515397 IGHV5-51A0A0C4DH38 117 aa11.21□□□□□ -0.61
VCAN-212ENST00000515397 B4E171 279 aa11.21□□□□□ -0.61
VCAN-212ENST00000515397 ZSCAN12O43309 604 aa11.21□□□□□ -0.61
VCAN-212ENST00000515397 C9P02748 559 aa11.21□□□□□ -0.61
VCAN-212ENST00000515397 LIPCP11150 499 aa11.21□□□□□ -0.61
VCAN-212ENST00000515397 POLR2CP19387 275 aaPredicted RBP11.21□□□□□ -0.61
VCAN-212ENST00000515397 COILP38432 576 aaPredicted RBP11.21□□□□□ -0.61
VCAN-212ENST00000515397 TSPAN7P41732 249 aa11.21□□□□□ -0.61
VCAN-212ENST00000515397 CAPZBP47756 277 aa11.21□□□□□ -0.61
VCAN-212ENST00000515397 PRAMEP78395 509 aa11.21□□□□□ -0.61
VCAN-212ENST00000515397 VAC14Q08AM6 782 aa11.21□□□□□ -0.61
VCAN-212ENST00000515397 ZNF658BQ4V348 819 aaPredicted RBP11.21□□□□□ -0.61
VCAN-212ENST00000515397 PCID2Q5JVF3 399 aa11.21□□□□□ -0.61
VCAN-212ENST00000515397 DCAF12Q5T6F0 453 aa11.21□□□□□ -0.61
VCAN-212ENST00000515397 TIPARPQ7Z3E1 657 aaKnown RBP11.21□□□□□ -0.61
VCAN-212ENST00000515397 DTX1Q86Y01 620 aa11.21□□□□□ -0.61
VCAN-212ENST00000515397 KRT222Q8N1A0 295 aa11.21□□□□□ -0.61
VCAN-212ENST00000515397 LMNTD1Q8N9Z9 388 aa11.21□□□□□ -0.61
VCAN-212ENST00000515397 PPHLN1Q8NEY8 458 aaKnown RBP11.21□□□□□ -0.61
VCAN-212ENST00000515397 LKAAEAR1Q8TD35 194 aa11.21□□□□□ -0.61
VCAN-212ENST00000515397 HEXDCQ8WVB3 486 aa11.21□□□□□ -0.61
VCAN-212ENST00000515397 ELMO1Q92556 727 aa11.21□□□□□ -0.61
VCAN-212ENST00000515397 NKD1Q969G9 470 aa11.21□□□□□ -0.61
VCAN-212ENST00000515397 MFSD3Q96ES6 412 aa11.21□□□□□ -0.61
VCAN-212ENST00000515397 ZDHHC12Q96GR4 267 aa11.21□□□□□ -0.61
VCAN-212ENST00000515397 RANBP9Q96S59 729 aa11.21□□□□□ -0.61
VCAN-212ENST00000515397 OR52A5Q9H2C5 316 aa11.21□□□□□ -0.61
VCAN-212ENST00000515397 SYBUQ9NX95 663 aa11.21□□□□□ -0.61
VCAN-212ENST00000515397 IL1RAPL1Q9NZN1 696 aa11.21□□□□□ -0.61
VCAN-212ENST00000515397 CIDEBQ9UHD4 219 aa11.21□□□□□ -0.61
VCAN-212ENST00000515397 ZKSCAN5Q9Y2L8 839 aa11.21□□□□□ -0.61
VCAN-212ENST00000515397 PCDHB11Q9Y5F2 797 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms