RNA–Protein interactions for RNA: ENST00000514271.2

CLIP1-205, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 3,493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-205ENST00000514271 CDH8P55286 799 aa7.32□□□□□ -1.24
CLIP1-205ENST00000514271 RING1Q06587 406 aa7.32□□□□□ -1.24
CLIP1-205ENST00000514271 SEPT7Q16181 437 aaKnown RBP7.32□□□□□ -1.24
CLIP1-205ENST00000514271 HADHQ16836 314 aaKnown RBP7.32□□□□□ -1.24
CLIP1-205ENST00000514271 RBM48Q5RL73 367 aaKnown RBP7.32□□□□□ -1.24
CLIP1-205ENST00000514271 HECTD3Q5T447 861 aa7.32□□□□□ -1.24
CLIP1-205ENST00000514271 SYT6Q5T7P8 510 aaPredicted RBP7.32□□□□□ -1.24
CLIP1-205ENST00000514271 DLEU7Q6UYE1 221 aa7.32□□□□□ -1.24
CLIP1-205ENST00000514271 PAQR9Q6ZVX9 377 aa7.32□□□□□ -1.24
CLIP1-205ENST00000514271 SCN4BQ8IWT1 228 aa7.32□□□□□ -1.24
CLIP1-205ENST00000514271 ZNF683Q8IZ20 524 aa7.32□□□□□ -1.24
CLIP1-205ENST00000514271 TRPV3Q8NET8 790 aa7.32□□□□□ -1.24
CLIP1-205ENST00000514271 OR6Q1Q8NGQ2 317 aa7.32□□□□□ -1.24
CLIP1-205ENST00000514271 RAB2BQ8WUD1 216 aa7.32□□□□□ -1.24
CLIP1-205ENST00000514271 HDAC2Q92769 488 aaKnown RBP7.32□□□□□ -1.24
CLIP1-205ENST00000514271 SMARCD2Q92925 531 aa7.32□□□□□ -1.24
CLIP1-205ENST00000514271 RELTQ969Z4 430 aa7.32□□□□□ -1.24
CLIP1-205ENST00000514271 HDAC11Q96DB2 347 aa7.32□□□□□ -1.24
CLIP1-205ENST00000514271 CENPNQ96H22 339 aaPredicted RBP7.32□□□□□ -1.24
CLIP1-205ENST00000514271 REXO5Q96IC2 774 aaKnown RBP7.32□□□□□ -1.24
CLIP1-205ENST00000514271 SMOQ99835 787 aa7.32□□□□□ -1.24
CLIP1-205ENST00000514271 DUSP21Q9H596 190 aa7.32□□□□□ -1.24
CLIP1-205ENST00000514271 TMLHEQ9NVH6 421 aa7.32□□□□□ -1.24
CLIP1-205ENST00000514271 CACNG4Q9UBN1 327 aa7.32□□□□□ -1.24
CLIP1-205ENST00000514271 METRNQ9UJH8 293 aa7.32□□□□□ -1.24
CLIP1-205ENST00000514271 LSM7Q9UK45 103 aaKnown RBP7.32□□□□□ -1.24
CLIP1-205ENST00000514271 TNRC18O15417 2968 aaPredicted RBP7.32□□□□□ -1.24
CLIP1-205ENST00000514271 GOLGA8TH3BQL2 631 aa7.31□□□□□ -1.24
CLIP1-205ENST00000514271 M0QYV0 167 aa7.31□□□□□ -1.24
CLIP1-205ENST00000514271 TK2O00142 265 aa7.31□□□□□ -1.24
CLIP1-205ENST00000514271 PER2O15055 1255 aa7.31□□□□□ -1.24
CLIP1-205ENST00000514271 FOXD2O60548 495 aaPredicted RBP7.31□□□□□ -1.24
CLIP1-205ENST00000514271 EEDO75530 441 aaKnown RBP7.31□□□□□ -1.24
CLIP1-205ENST00000514271 F9P00740 461 aa7.31□□□□□ -1.24
CLIP1-205ENST00000514271 MTHFD2P13995 350 aa7.31□□□□□ -1.24
CLIP1-205ENST00000514271 RYKP34925 604 aa7.31□□□□□ -1.24
CLIP1-205ENST00000514271 COG7P83436 770 aa7.31□□□□□ -1.24
CLIP1-205ENST00000514271 ZBTB16Q05516 673 aa7.31□□□□□ -1.24
CLIP1-205ENST00000514271 ZBTB17Q13105 803 aa7.31□□□□□ -1.24
CLIP1-205ENST00000514271 DOC2BQ14184 412 aa7.31□□□□□ -1.24
CLIP1-205ENST00000514271 MAP7D1Q3KQU3 841 aa7.31□□□□□ -1.24
CLIP1-205ENST00000514271 LRRC8EQ6NSJ5 796 aa7.31□□□□□ -1.24
CLIP1-205ENST00000514271 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.31□□□□□ -1.24
CLIP1-205ENST00000514271 FSTL5Q8N475 847 aaPredicted RBP7.31□□□□□ -1.24
CLIP1-205ENST00000514271 FAM47BQ8NA70 645 aa7.31□□□□□ -1.24
CLIP1-205ENST00000514271 ATAD1Q8NBU5 361 aa7.31□□□□□ -1.24
CLIP1-205ENST00000514271 KCTD6Q8NC69 237 aa7.31□□□□□ -1.24
CLIP1-205ENST00000514271 CHDHQ8NE62 594 aaPredicted RBP7.31□□□□□ -1.24
CLIP1-205ENST00000514271 HCAR2Q8TDS4 363 aa7.31□□□□□ -1.24
CLIP1-205ENST00000514271 CANT1Q8WVQ1 401 aa7.31□□□□□ -1.24
CLIP1-205ENST00000514271 SGCDQ92629 289 aa7.31□□□□□ -1.24
CLIP1-205ENST00000514271 NTAN1Q96AB6 310 aa7.31□□□□□ -1.24
CLIP1-205ENST00000514271 SHDQ96IW2 340 aa7.31□□□□□ -1.24
CLIP1-205ENST00000514271 ACE2Q9BYF1 805 aaPredicted RBP7.31□□□□□ -1.24
CLIP1-205ENST00000514271 ACTL8Q9H568 366 aa7.31□□□□□ -1.24
CLIP1-205ENST00000514271 EFCAB1Q9HAE3 211 aa7.31□□□□□ -1.24
CLIP1-205ENST00000514271 IL21Q9HBE4 155 aa7.31□□□□□ -1.24
CLIP1-205ENST00000514271 TRPC7Q9HCX4 862 aa7.31□□□□□ -1.24
CLIP1-205ENST00000514271 ZNF225Q9UK10 706 aa7.31□□□□□ -1.24
CLIP1-205ENST00000514271 E2F8A0AVK6 867 aa7.31□□□□□ -1.24
CLIP1-205ENST00000514271 MROH6A6NGR9 719 aa7.31□□□□□ -1.24
CLIP1-205ENST00000514271 ERI2A8K979 691 aaKnown RBP7.31□□□□□ -1.24
CLIP1-205ENST00000514271 MUSKO15146 869 aa7.31□□□□□ -1.24
CLIP1-205ENST00000514271 CCL16O15467 120 aa7.31□□□□□ -1.24
CLIP1-205ENST00000514271 LINC01565O15544 149 aa7.31□□□□□ -1.24
CLIP1-205ENST00000514271 BCAS1O75363 584 aaPredicted RBP7.31□□□□□ -1.24
CLIP1-205ENST00000514271 SUPT3HO75486 399 aa7.31□□□□□ -1.24
CLIP1-205ENST00000514271 DAB1O75553 588 aa7.31□□□□□ -1.24
CLIP1-205ENST00000514271 RAC2P15153 192 aa7.31□□□□□ -1.24
CLIP1-205ENST00000514271 MGAT1P26572 445 aa7.31□□□□□ -1.24
CLIP1-205ENST00000514271 UGT2B10P36537 528 aa7.31□□□□□ -1.24
CLIP1-205ENST00000514271 EPHB1P54762 984 aa7.31□□□□□ -1.24
CLIP1-205ENST00000514271 YWHAGP61981 247 aaKnown RBP eCLIP7.31□□□□□ -1.24
CLIP1-205ENST00000514271 ZP2Q05996 745 aa7.31□□□□□ -1.24
CLIP1-205ENST00000514271 MTM1Q13496 603 aa7.31□□□□□ -1.24
CLIP1-205ENST00000514271 NKG7Q16617 165 aa7.31□□□□□ -1.24
CLIP1-205ENST00000514271 SLC44A4Q53GD3 710 aa7.31□□□□□ -1.24
CLIP1-205ENST00000514271 SMUG1Q53HV7 270 aa7.31□□□□□ -1.24
CLIP1-205ENST00000514271 CCNYL2Q5T2Q4 361 aa7.31□□□□□ -1.24
CLIP1-205ENST00000514271 SEL1L3Q68CR1 1132 aa7.31□□□□□ -1.24
CLIP1-205ENST00000514271 ITPRIPL1Q6GPH6 555 aa7.31□□□□□ -1.24
CLIP1-205ENST00000514271 PLBD1Q6P4A8 553 aa7.31□□□□□ -1.24
CLIP1-205ENST00000514271 BLOC1S3Q6QNY0 202 aa7.31□□□□□ -1.24
CLIP1-205ENST00000514271 KIAA2013Q8IYS2 634 aa7.31□□□□□ -1.24
CLIP1-205ENST00000514271 NPWQ8N729 165 aa7.31□□□□□ -1.24
CLIP1-205ENST00000514271 FAM156AQ8NDB6 213 aa7.31□□□□□ -1.24
CLIP1-205ENST00000514271 ADAM32Q8TC27 787 aa7.31□□□□□ -1.24
CLIP1-205ENST00000514271 P2RY11Q96G91 374 aa7.31□□□□□ -1.24
CLIP1-205ENST00000514271 B3GALT6Q96L58 329 aa7.31□□□□□ -1.24
CLIP1-205ENST00000514271 DPEP3Q9H4B8 488 aa7.31□□□□□ -1.24
CLIP1-205ENST00000514271 RHOJQ9H4E5 214 aa7.31□□□□□ -1.24
CLIP1-205ENST00000514271 PAIP2BQ9ULR5 123 aaKnown RBP7.31□□□□□ -1.24
CLIP1-205ENST00000514271 GTF2A1LQ9UNN4 478 aa7.31□□□□□ -1.24
CLIP1-205ENST00000514271 SPO11Q9Y5K1 396 aa7.31□□□□□ -1.24
CLIP1-205ENST00000514271 GPC6Q9Y625 555 aaPredicted RBP7.31□□□□□ -1.24
CLIP1-205ENST00000514271 C2orf81A6NN90 581 aa7.31□□□□□ -1.24
CLIP1-205ENST00000514271 TMEM233B4DJY2 109 aa7.31□□□□□ -1.24
CLIP1-205ENST00000514271 GPIP06744 558 aa7.31□□□□□ -1.24
CLIP1-205ENST00000514271 BMP4P12644 408 aa7.31□□□□□ -1.24
CLIP1-205ENST00000514271 LAMP2P13473 410 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms