RNA–Protein interactions for RNA: ENST00000512656.1

USP46-208, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 3

Gene USP46, Length 467 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-208ENST00000512656 KLC4Q9NSK0 619 aa7.08□□□□□ -1.28
USP46-208ENST00000512656 ZNHIT6Q9NWK9 470 aaKnown RBP7.08□□□□□ -1.28
USP46-208ENST00000512656 DTLQ9NZJ0 730 aa7.08□□□□□ -1.28
USP46-208ENST00000512656 TMEM9Q9P0T7 183 aa7.08□□□□□ -1.28
USP46-208ENST00000512656 NFKBIL1Q9UBC1 381 aaPredicted RBP7.08□□□□□ -1.28
USP46-208ENST00000512656 CPNE7Q9UBL6 633 aa7.08□□□□□ -1.28
USP46-208ENST00000512656 GPN3Q9UHW5 284 aaPredicted RBP7.08□□□□□ -1.28
USP46-208ENST00000512656 PILRAQ9UKJ1 303 aa7.08□□□□□ -1.28
USP46-208ENST00000512656 CNOT6Q9ULM6 557 aaKnown RBP7.08□□□□□ -1.28
USP46-208ENST00000512656 PRKAB1Q9Y478 270 aa7.08□□□□□ -1.28
USP46-208ENST00000512656 HEY1Q9Y5J3 304 aa7.08□□□□□ -1.28
USP46-208ENST00000512656 SPTAN1Q13813 2472 aaKnown RBP7.08□□□□□ -1.28
USP46-208ENST00000512656 LRRD1A4D1F6 860 aa7.07□□□□□ -1.28
USP46-208ENST00000512656 A6NCN8 305 aa7.07□□□□□ -1.28
USP46-208ENST00000512656 FADS2P1A8MWK0 482 aa7.07□□□□□ -1.28
USP46-208ENST00000512656 PYCARD-AS1I3L0S3 204 aa7.07□□□□□ -1.28
USP46-208ENST00000512656 APOL1O14791 398 aa7.07□□□□□ -1.28
USP46-208ENST00000512656 TOX3O15405 576 aaPredicted RBP7.07□□□□□ -1.28
USP46-208ENST00000512656 VEGFDO43915 354 aa7.07□□□□□ -1.28
USP46-208ENST00000512656 STK17BO94768 372 aa7.07□□□□□ -1.28
USP46-208ENST00000512656 EML2O95834 649 aa7.07□□□□□ -1.28
USP46-208ENST00000512656 VIPP01282 170 aa7.07□□□□□ -1.28
USP46-208ENST00000512656 GYPCP04921 128 aa7.07□□□□□ -1.28
USP46-208ENST00000512656 MMP2P08253 660 aa7.07□□□□□ -1.28
USP46-208ENST00000512656 TPM1P09493 284 aa7.07□□□□□ -1.28
USP46-208ENST00000512656 ANKRD34CP0C6C1 535 aa7.07□□□□□ -1.28
USP46-208ENST00000512656 ZNF8P17098 575 aaPredicted RBP7.07□□□□□ -1.28
USP46-208ENST00000512656 AMD1P17707 334 aa7.07□□□□□ -1.28
USP46-208ENST00000512656 XRCC1P18887 633 aaPredicted RBP7.07□□□□□ -1.28
USP46-208ENST00000512656 IDSP22304 550 aa7.07□□□□□ -1.28
USP46-208ENST00000512656 KDELR1P24390 212 aa7.07□□□□□ -1.28
USP46-208ENST00000512656 ARNTP27540 789 aa7.07□□□□□ -1.28
USP46-208ENST00000512656 HNRNPH3P31942 346 aaKnown RBP7.07□□□□□ -1.28
USP46-208ENST00000512656 CASP14P31944 242 aa7.07□□□□□ -1.28
USP46-208ENST00000512656 ARHGAP25P42331 645 aa7.07□□□□□ -1.28
USP46-208ENST00000512656 POLE2P56282 527 aa7.07□□□□□ -1.28
USP46-208ENST00000512656 TAS2R40P59535 323 aa7.07□□□□□ -1.28
USP46-208ENST00000512656 NFKB2Q00653 900 aa7.07□□□□□ -1.28
USP46-208ENST00000512656 CDK18Q07002 472 aa7.07□□□□□ -1.28
USP46-208ENST00000512656 AP1B1Q10567 949 aa7.07□□□□□ -1.28
USP46-208ENST00000512656 SLC10A2Q12908 348 aaPredicted RBP7.07□□□□□ -1.28
USP46-208ENST00000512656 GTF2H3Q13889 308 aa7.07□□□□□ -1.28
USP46-208ENST00000512656 SEPT6Q14141 434 aa7.07□□□□□ -1.28
USP46-208ENST00000512656 TRIM14Q14142 442 aa7.07□□□□□ -1.28
USP46-208ENST00000512656 IHHQ14623 411 aa7.07□□□□□ -1.28
USP46-208ENST00000512656 CLCA4Q14CN2 919 aa7.07□□□□□ -1.28
USP46-208ENST00000512656 SLC18A3Q16572 532 aa7.07□□□□□ -1.28
USP46-208ENST00000512656 INSCQ1MX18 579 aa7.07□□□□□ -1.28
USP46-208ENST00000512656 CYB5D1Q6P9G0 228 aa7.07□□□□□ -1.28
USP46-208ENST00000512656 NT5DC3Q86UY8 548 aa7.07□□□□□ -1.28
USP46-208ENST00000512656 LRRTM4Q86VH4 590 aa7.07□□□□□ -1.28
USP46-208ENST00000512656 RBM12BQ8IXT5 1001 aaKnown RBP7.07□□□□□ -1.28
USP46-208ENST00000512656 CNTD1Q8N815 330 aa7.07□□□□□ -1.28
USP46-208ENST00000512656 C9orf43Q8TAL5 461 aaPredicted RBP7.07□□□□□ -1.28
USP46-208ENST00000512656 GLYATL1Q969I3 302 aa7.07□□□□□ -1.28
USP46-208ENST00000512656 RTP4Q96DX8 246 aa7.07□□□□□ -1.28
USP46-208ENST00000512656 IMP4Q96G21 291 aaKnown RBP7.07□□□□□ -1.28
USP46-208ENST00000512656 WDR24Q96S15 920 aa7.07□□□□□ -1.28
USP46-208ENST00000512656 TIMM29Q9BSF4 260 aa7.07□□□□□ -1.28
USP46-208ENST00000512656 SPRY4Q9C004 299 aa7.07□□□□□ -1.28
USP46-208ENST00000512656 TRIM4Q9C037 500 aa7.07□□□□□ -1.28
USP46-208ENST00000512656 OR2AG1Q9H205 316 aa7.07□□□□□ -1.28
USP46-208ENST00000512656 MAGEE1Q9HCI5 957 aa7.07□□□□□ -1.28
USP46-208ENST00000512656 PRDM8Q9NQV8 689 aa7.07□□□□□ -1.28
USP46-208ENST00000512656 ATXN10Q9UBB4 475 aa7.07□□□□□ -1.28
USP46-208ENST00000512656 KLHL3Q9UH77 587 aa7.07□□□□□ -1.28
USP46-208ENST00000512656 NENFQ9UMX5 172 aa7.07□□□□□ -1.28
USP46-208ENST00000512656 TMEM184BQ9Y519 407 aaPredicted RBP7.07□□□□□ -1.28
USP46-208ENST00000512656 SDK2Q58EX2 2172 aa7.07□□□□□ -1.28
USP46-208ENST00000512656 USP9XQ93008 2570 aaPredicted RBP7.07□□□□□ -1.28
USP46-208ENST00000512656 CENPEQ02224 2701 aa7.07□□□□□ -1.28
USP46-208ENST00000512656 MN1Q10571 1320 aaPredicted RBP7.06□□□□□ -1.28
USP46-208ENST00000512656 NOTCH2Q04721 2471 aa7.06□□□□□ -1.28
USP46-208ENST00000512656 LOC101059948A0A1B0GTJ6 334 aa7.06□□□□□ -1.28
USP46-208ENST00000512656 SSU72P8A0A1W2PR75 194 aa7.06□□□□□ -1.28
USP46-208ENST00000512656 SYCE3A1L190 88 aa7.06□□□□□ -1.28
USP46-208ENST00000512656 PDZK1P1A8MUH7 402 aa7.06□□□□□ -1.28
USP46-208ENST00000512656 CHUKO15111 745 aa7.06□□□□□ -1.28
USP46-208ENST00000512656 CBFA2T2O43439 604 aa7.06□□□□□ -1.28
USP46-208ENST00000512656 AKR1B10O60218 316 aa7.06□□□□□ -1.28
USP46-208ENST00000512656 KCNJ13O60928 360 aa7.06□□□□□ -1.28
USP46-208ENST00000512656 UBXN7O94888 489 aa7.06□□□□□ -1.28
USP46-208ENST00000512656 NDST3O95803 873 aa7.06□□□□□ -1.28
USP46-208ENST00000512656 SLC4A1P02730 911 aa7.06□□□□□ -1.28
USP46-208ENST00000512656 C9P02748 559 aa7.06□□□□□ -1.28
USP46-208ENST00000512656 TMEM253P0C7T8 217 aa7.06□□□□□ -1.28
USP46-208ENST00000512656 PRKAR1AP10644 381 aa7.06□□□□□ -1.28
USP46-208ENST00000512656 ZNF7P17097 686 aaPredicted RBP7.06□□□□□ -1.28
USP46-208ENST00000512656 TCN2P20062 427 aa7.06□□□□□ -1.28
USP46-208ENST00000512656 NME2P22392 152 aa7.06□□□□□ -1.28
USP46-208ENST00000512656 STAT5AP42229 794 aa7.06□□□□□ -1.28
USP46-208ENST00000512656 HALP42357 657 aa7.06□□□□□ -1.28
USP46-208ENST00000512656 SLC1A1P43005 524 aa7.06□□□□□ -1.28
USP46-208ENST00000512656 NR2C2P49116 596 aa7.06□□□□□ -1.28
USP46-208ENST00000512656 UBE2IP63279 158 aaKnown RBP7.06□□□□□ -1.28
USP46-208ENST00000512656 FOXM1Q08050 763 aa7.06□□□□□ -1.28
USP46-208ENST00000512656 CDC20Q12834 499 aa7.06□□□□□ -1.28
USP46-208ENST00000512656 ZBTB17Q13105 803 aa7.06□□□□□ -1.28
USP46-208ENST00000512656 GALNT3Q14435 633 aa7.06□□□□□ -1.28
USP46-208ENST00000512656 IL11RAQ14626 422 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms