RNA–Protein interactions for RNA: ENST00000509995.5

SNF8-207, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-207ENST00000509995 A0A0J9YYE9 177 aa10.43□□□□□ -0.74
SNF8-207ENST00000509995 C2CD4BA6NLJ0 364 aa10.43□□□□□ -0.74
SNF8-207ENST00000509995 TRBC1P01850 177 aa10.43□□□□□ -0.74
SNF8-207ENST00000509995 PDHA1P08559 390 aa10.43□□□□□ -0.74
SNF8-207ENST00000509995 HOXD4P09016 255 aaPredicted RBP10.43□□□□□ -0.74
SNF8-207ENST00000509995 CDH3P22223 829 aa10.43□□□□□ -0.74
SNF8-207ENST00000509995 HOXC12P31275 282 aa10.43□□□□□ -0.74
SNF8-207ENST00000509995 RFC1P35251 1148 aaPredicted RBP10.43□□□□□ -0.74
SNF8-207ENST00000509995 HSPA9P38646 679 aaKnown RBP10.43□□□□□ -0.74
SNF8-207ENST00000509995 HALP42357 657 aa10.43□□□□□ -0.74
SNF8-207ENST00000509995 PMP22Q01453 160 aa10.43□□□□□ -0.74
SNF8-207ENST00000509995 CACNG1Q06432 222 aa10.43□□□□□ -0.74
SNF8-207ENST00000509995 IL10RBQ08334 325 aa10.43□□□□□ -0.74
SNF8-207ENST00000509995 TUBB8Q3ZCM7 444 aa10.43□□□□□ -0.74
SNF8-207ENST00000509995 RHBDD2Q6NTF9 364 aa10.43□□□□□ -0.74
SNF8-207ENST00000509995 ARMC6Q6NXE6 501 aa10.43□□□□□ -0.74
SNF8-207ENST00000509995 TRIM65Q6PJ69 517 aa10.43□□□□□ -0.74
SNF8-207ENST00000509995 KIRREL2Q6UWL6 708 aa10.43□□□□□ -0.74
SNF8-207ENST00000509995 ZNF547Q8IVP9 402 aa10.43□□□□□ -0.74
SNF8-207ENST00000509995 ACRBPQ8NEB7 543 aa10.43□□□□□ -0.74
SNF8-207ENST00000509995 HAS2Q92819 552 aa10.43□□□□□ -0.74
SNF8-207ENST00000509995 SPATA32Q96LK8 384 aa10.43□□□□□ -0.74
SNF8-207ENST00000509995 CEP63Q96MT8 703 aa10.43□□□□□ -0.74
SNF8-207ENST00000509995 AP1M1Q9BXS5 423 aa10.43□□□□□ -0.74
SNF8-207ENST00000509995 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP10.43□□□□□ -0.74
SNF8-207ENST00000509995 ZNF395Q9H8N7 513 aaPredicted RBP10.43□□□□□ -0.74
SNF8-207ENST00000509995 TRIM39Q9HCM9 518 aa10.43□□□□□ -0.74
SNF8-207ENST00000509995 PLA2G3Q9NZ20 509 aa10.43□□□□□ -0.74
SNF8-207ENST00000509995 STMN3Q9NZ72 180 aa10.43□□□□□ -0.74
SNF8-207ENST00000509995 PPT2Q9UMR5 302 aa10.43□□□□□ -0.74
SNF8-207ENST00000509995 HPSEQ9Y251 543 aa10.43□□□□□ -0.74
SNF8-207ENST00000509995 HS3ST3B1Q9Y662 390 aa10.43□□□□□ -0.74
SNF8-207ENST00000509995 ANK3Q12955 4377 aaKnown RBP10.42□□□□□ -0.74
SNF8-207ENST00000509995 NKX2-6A6NCS4 301 aa10.42□□□□□ -0.74
SNF8-207ENST00000509995 DFFAO00273 331 aa10.42□□□□□ -0.74
SNF8-207ENST00000509995 ADAM10O14672 748 aa10.42□□□□□ -0.74
SNF8-207ENST00000509995 ZRANB2O95218 330 aaKnown RBP eCLIP10.42□□□□□ -0.74
SNF8-207ENST00000509995 SOX11P35716 441 aa10.42□□□□□ -0.74
SNF8-207ENST00000509995 SPINT3P49223 89 aa10.42□□□□□ -0.74
SNF8-207ENST00000509995 LMAN1P49257 510 aa10.42□□□□□ -0.74
SNF8-207ENST00000509995 CTSCP53634 463 aa10.42□□□□□ -0.74
SNF8-207ENST00000509995 TPI1P60174 286 aa10.42□□□□□ -0.74
SNF8-207ENST00000509995 DEFB113Q30KQ7 82 aa10.42□□□□□ -0.74
SNF8-207ENST00000509995 NKAIN1Q4KMZ8 207 aa10.42□□□□□ -0.74
SNF8-207ENST00000509995 COBLL1Q53SF7 1204 aa10.42□□□□□ -0.74
SNF8-207ENST00000509995 C3P1Q6ZMU1 363 aa10.42□□□□□ -0.74
SNF8-207ENST00000509995 ADGRG6Q86SQ4 1221 aa10.42□□□□□ -0.74
SNF8-207ENST00000509995 KRTAP1-3Q8IUG1 177 aa10.42□□□□□ -0.74
SNF8-207ENST00000509995 ARHGAP12Q8IWW6 846 aa10.42□□□□□ -0.74
SNF8-207ENST00000509995 GPR135Q8IZ08 494 aa10.42□□□□□ -0.74
SNF8-207ENST00000509995 NDUFAF2Q8N183 169 aa10.42□□□□□ -0.74
SNF8-207ENST00000509995 PGBD5Q8N414 524 aa10.42□□□□□ -0.74
SNF8-207ENST00000509995 TAB3Q8N5C8 712 aaPredicted RBP10.42□□□□□ -0.74
SNF8-207ENST00000509995 MSANTD4Q8NCY6 345 aa10.42□□□□□ -0.74
SNF8-207ENST00000509995 GPR137Q96N19 417 aa10.42□□□□□ -0.74
SNF8-207ENST00000509995 MGME1Q9BQP7 344 aa10.42□□□□□ -0.74
SNF8-207ENST00000509995 PDCL3Q9H2J4 239 aa10.42□□□□□ -0.74
SNF8-207ENST00000509995 CLEC4MQ9H2X3 399 aaPredicted RBP10.42□□□□□ -0.74
SNF8-207ENST00000509995 FAM83DQ9H4H8 585 aa10.42□□□□□ -0.74
SNF8-207ENST00000509995 LRFN1Q9P244 771 aa10.42□□□□□ -0.74
SNF8-207ENST00000509995 POMT2Q9UKY4 750 aa10.42□□□□□ -0.74
SNF8-207ENST00000509995 DNPEPQ9ULA0 475 aa10.42□□□□□ -0.74
SNF8-207ENST00000509995 LUC7L2Q9Y383 392 aaKnown RBP10.42□□□□□ -0.74
SNF8-207ENST00000509995 FAM237BA0A1B0GVD1 139 aa10.41□□□□□ -0.74
SNF8-207ENST00000509995 OR6C74A6NCV1 312 aa10.41□□□□□ -0.74
SNF8-207ENST00000509995 FAM90A27PA6NNH2 459 aa10.41□□□□□ -0.74
SNF8-207ENST00000509995 TOXO94900 526 aa10.41□□□□□ -0.74
SNF8-207ENST00000509995 SLC25A14O95258 325 aaPredicted RBP10.41□□□□□ -0.74
SNF8-207ENST00000509995 CLDN7O95471 211 aa10.41□□□□□ -0.74
SNF8-207ENST00000509995 F10P00742 488 aa10.41□□□□□ -0.74
SNF8-207ENST00000509995 PYGMP11217 842 aa10.41□□□□□ -0.74
SNF8-207ENST00000509995 CYP11B1P15538 503 aa10.41□□□□□ -0.74
SNF8-207ENST00000509995 ST6GAL1P15907 406 aa10.41□□□□□ -0.74
SNF8-207ENST00000509995 VCLP18206 1134 aa10.41□□□□□ -0.74
SNF8-207ENST00000509995 HTR7P34969 479 aa10.41□□□□□ -0.74
SNF8-207ENST00000509995 SYKP43405 635 aa10.41□□□□□ -0.74
SNF8-207ENST00000509995 APBA1Q02410 837 aa10.41□□□□□ -0.74
SNF8-207ENST00000509995 RPE65Q16518 533 aa10.41□□□□□ -0.74
SNF8-207ENST00000509995 FOXD4L6Q3SYB3 417 aaPredicted RBP10.41□□□□□ -0.74
SNF8-207ENST00000509995 RALGPS1Q5JS13 557 aa10.41□□□□□ -0.74
SNF8-207ENST00000509995 ZNF569Q5MCW4 686 aa10.41□□□□□ -0.74
SNF8-207ENST00000509995 PAMR1Q6UXH9 720 aa10.41□□□□□ -0.74
SNF8-207ENST00000509995 FOXD4L3Q6VB84 417 aaPredicted RBP10.41□□□□□ -0.74
SNF8-207ENST00000509995 C11orf96Q7Z7L8 435 aa10.41□□□□□ -0.74
SNF8-207ENST00000509995 DOLPP1Q86YN1 238 aa10.41□□□□□ -0.74
SNF8-207ENST00000509995 TRIM59Q8IWR1 403 aa10.41□□□□□ -0.74
SNF8-207ENST00000509995 EID3Q8N140 333 aa10.41□□□□□ -0.74
SNF8-207ENST00000509995 OR11G2Q8NGC1 345 aa10.41□□□□□ -0.74
SNF8-207ENST00000509995 JOSD2Q8TAC2 188 aa10.41□□□□□ -0.74
SNF8-207ENST00000509995 ZFPM2Q8WW38 1151 aa10.41□□□□□ -0.74
SNF8-207ENST00000509995 COX4I2Q96KJ9 171 aa10.41□□□□□ -0.74
SNF8-207ENST00000509995 ZNF599Q96NL3 588 aa10.41□□□□□ -0.74
SNF8-207ENST00000509995 GPATCH1Q9BRR8 931 aaKnown RBP10.41□□□□□ -0.74
SNF8-207ENST00000509995 MRM3Q9HC36 420 aaKnown RBP10.41□□□□□ -0.74
SNF8-207ENST00000509995 DTLQ9NZJ0 730 aa10.41□□□□□ -0.74
SNF8-207ENST00000509995 DHCR7Q9UBM7 475 aaKnown RBP10.41□□□□□ -0.74
SNF8-207ENST00000509995 APEX2Q9UBZ4 518 aa10.41□□□□□ -0.74
SNF8-207ENST00000509995 AP1M2Q9Y6Q5 423 aa10.41□□□□□ -0.74
SNF8-207ENST00000509995 H3BMH7 237 aa10.4□□□□□ -0.74
SNF8-207ENST00000509995 FZD6O60353 706 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms