RNA–Protein interactions for RNA: ENST00000508852.5

CCHCR1-227, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 589 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-227ENST00000508852 PRKAR1AP10644 381 aa13.29□□□□□ -0.28
CCHCR1-227ENST00000508852 MARCKSL1P49006 195 aa13.29□□□□□ -0.28
CCHCR1-227ENST00000508852 CTSCP53634 463 aa13.29□□□□□ -0.28
CCHCR1-227ENST00000508852 TUBB3Q13509 450 aa13.29□□□□□ -0.28
CCHCR1-227ENST00000508852 LAMB3Q13751 1172 aa13.29□□□□□ -0.28
CCHCR1-227ENST00000508852 NFE2L1Q14494 772 aa13.29□□□□□ -0.28
CCHCR1-227ENST00000508852 GSE1Q14687 1217 aa13.29□□□□□ -0.28
CCHCR1-227ENST00000508852 P3H1Q32P28 736 aa13.29□□□□□ -0.28
CCHCR1-227ENST00000508852 GALNT6Q8NCL4 622 aa13.29□□□□□ -0.28
CCHCR1-227ENST00000508852 HM13Q8TCT9 377 aa13.29□□□□□ -0.28
CCHCR1-227ENST00000508852 C12orf66Q96MD2 445 aa13.29□□□□□ -0.28
CCHCR1-227ENST00000508852 ALS2CR12Q96Q35 445 aa13.29□□□□□ -0.28
CCHCR1-227ENST00000508852 COPS8Q99627 209 aa13.29□□□□□ -0.28
CCHCR1-227ENST00000508852 TBL1YQ9BQ87 522 aa13.29□□□□□ -0.28
CCHCR1-227ENST00000508852 GOLPH3Q9H4A6 298 aa13.29□□□□□ -0.28
CCHCR1-227ENST00000508852 KIR3DX1Q9H7L2 352 aa13.29□□□□□ -0.28
CCHCR1-227ENST00000508852 HRASLS2Q9NWW9 162 aa13.29□□□□□ -0.28
CCHCR1-227ENST00000508852 CROTQ9UKG9 612 aa13.29□□□□□ -0.28
CCHCR1-227ENST00000508852 AMFRQ9UKV5 643 aa13.29□□□□□ -0.28
CCHCR1-227ENST00000508852 MKRN2OSH3BPM6 223 aa13.28□□□□□ -0.28
CCHCR1-227ENST00000508852 IFRD1O00458 451 aaPredicted RBP13.28□□□□□ -0.28
CCHCR1-227ENST00000508852 ATP1B2P14415 290 aaPredicted RBP13.28□□□□□ -0.28
CCHCR1-227ENST00000508852 PSMB4P28070 264 aa13.28□□□□□ -0.28
CCHCR1-227ENST00000508852 TUBB4BP68371 445 aa13.28□□□□□ -0.28
CCHCR1-227ENST00000508852 SH3BP2P78314 561 aa13.28□□□□□ -0.28
CCHCR1-227ENST00000508852 RPA4Q13156 261 aa13.28□□□□□ -0.28
CCHCR1-227ENST00000508852 TUBB2AQ13885 445 aa13.28□□□□□ -0.28
CCHCR1-227ENST00000508852 PARP6Q2NL67 630 aa13.28□□□□□ -0.28
CCHCR1-227ENST00000508852 DEFB109BQ30KR1 87 aa13.28□□□□□ -0.28
CCHCR1-227ENST00000508852 C16orf46Q6P387 395 aa13.28□□□□□ -0.28
CCHCR1-227ENST00000508852 ARHGEF18Q6ZSZ5 1173 aa13.28□□□□□ -0.28
CCHCR1-227ENST00000508852 KIAA1328Q86T90 577 aa13.28□□□□□ -0.28
CCHCR1-227ENST00000508852 UNC5BQ8IZJ1 945 aa13.28□□□□□ -0.28
CCHCR1-227ENST00000508852 NXPE1Q8N323 547 aa13.28□□□□□ -0.28
CCHCR1-227ENST00000508852 D2HGDHQ8N465 521 aa13.28□□□□□ -0.28
CCHCR1-227ENST00000508852 TUBB2BQ9BVA1 445 aa13.28□□□□□ -0.28
CCHCR1-227ENST00000508852 WWP1Q9H0M0 922 aa13.28□□□□□ -0.28
CCHCR1-227ENST00000508852 LRRC40Q9H9A6 602 aa13.28□□□□□ -0.28
CCHCR1-227ENST00000508852 LATS2Q9NRM7 1088 aa13.28□□□□□ -0.28
CCHCR1-227ENST00000508852 PSMD13Q9UNM6 376 aa13.28□□□□□ -0.28
CCHCR1-227ENST00000508852 IGHV5-51A0A0C4DH38 117 aa13.27□□□□□ -0.29
CCHCR1-227ENST00000508852 F5H423 210 aaPredicted RBP13.27□□□□□ -0.29
CCHCR1-227ENST00000508852 H7C0S8 307 aa13.27□□□□□ -0.29
CCHCR1-227ENST00000508852 BUD23O43709 281 aaKnown RBP13.27□□□□□ -0.29
CCHCR1-227ENST00000508852 KIF1CO43896 1103 aaKnown RBP13.27□□□□□ -0.29
CCHCR1-227ENST00000508852 CPNE3O75131 537 aaKnown RBP13.27□□□□□ -0.29
CCHCR1-227ENST00000508852 CREG1O75629 220 aa13.27□□□□□ -0.29
CCHCR1-227ENST00000508852 GAS8O95995 478 aa13.27□□□□□ -0.29
CCHCR1-227ENST00000508852 OAS2P29728 719 aaKnown RBP13.27□□□□□ -0.29
CCHCR1-227ENST00000508852 PBLDP30039 288 aaPredicted RBP13.27□□□□□ -0.29
CCHCR1-227ENST00000508852 CASRP41180 1078 aa13.27□□□□□ -0.29
CCHCR1-227ENST00000508852 CD151P48509 253 aa13.27□□□□□ -0.29
CCHCR1-227ENST00000508852 PRLHRP49683 370 aa13.27□□□□□ -0.29
CCHCR1-227ENST00000508852 ZNF75DP51815 510 aa13.27□□□□□ -0.29
CCHCR1-227ENST00000508852 VAV2P52735 878 aa13.27□□□□□ -0.29
CCHCR1-227ENST00000508852 GSDMDP57764 484 aa13.27□□□□□ -0.29
CCHCR1-227ENST00000508852 RPS15P62841 145 aaKnown RBP13.27□□□□□ -0.29
CCHCR1-227ENST00000508852 KIF5AQ12840 1032 aa13.27□□□□□ -0.29
CCHCR1-227ENST00000508852 LACTB2Q53H82 288 aaPredicted RBP13.27□□□□□ -0.29
CCHCR1-227ENST00000508852 FAM182AQ5T1J6 154 aa13.27□□□□□ -0.29
CCHCR1-227ENST00000508852 FAM83HQ6ZRV2 1179 aaPredicted RBP13.27□□□□□ -0.29
CCHCR1-227ENST00000508852 DET1Q7L5Y6 550 aa13.27□□□□□ -0.29
CCHCR1-227ENST00000508852 PEX26Q7Z412 305 aa13.27□□□□□ -0.29
CCHCR1-227ENST00000508852 LINC00523Q86TU6 105 aa13.27□□□□□ -0.29
CCHCR1-227ENST00000508852 KLHDC8BQ8IXV7 354 aa13.27□□□□□ -0.29
CCHCR1-227ENST00000508852 CFAP206Q8IYR0 622 aa13.27□□□□□ -0.29
CCHCR1-227ENST00000508852 ACVR1CQ8NER5 493 aa13.27□□□□□ -0.29
CCHCR1-227ENST00000508852 GPR150Q8NGU9 434 aa13.27□□□□□ -0.29
CCHCR1-227ENST00000508852 THAP4Q8WY91 577 aa13.27□□□□□ -0.29
CCHCR1-227ENST00000508852 INSM2Q96T92 566 aaPredicted RBP13.27□□□□□ -0.29
CCHCR1-227ENST00000508852 TTC1Q99614 292 aa13.27□□□□□ -0.29
CCHCR1-227ENST00000508852 FRMD8P1Q9BZ68 369 aaPredicted RBP13.27□□□□□ -0.29
CCHCR1-227ENST00000508852 LHX9Q9NQ69 397 aa13.27□□□□□ -0.29
CCHCR1-227ENST00000508852 C1GALT1Q9NS00 363 aa13.27□□□□□ -0.29
CCHCR1-227ENST00000508852 FGF21Q9NSA1 209 aa13.27□□□□□ -0.29
CCHCR1-227ENST00000508852 ZDHHC3Q9NYG2 299 aa13.27□□□□□ -0.29
CCHCR1-227ENST00000508852 SLC24A2Q9UI40 661 aa13.27□□□□□ -0.29
CCHCR1-227ENST00000508852 FKBPLQ9UIM3 349 aa13.27□□□□□ -0.29
CCHCR1-227ENST00000508852 BSNQ9UPA5 3926 aa13.27□□□□□ -0.29
CCHCR1-227ENST00000508852 SOWAHDA6NJG2 315 aa13.26□□□□□ -0.29
CCHCR1-227ENST00000508852 ERI2A8K979 691 aaKnown RBP13.26□□□□□ -0.29
CCHCR1-227ENST00000508852 KDM1AO60341 852 aa13.26□□□□□ -0.29
CCHCR1-227ENST00000508852 KATNA1O75449 491 aa13.26□□□□□ -0.29
CCHCR1-227ENST00000508852 AP2A2O94973 939 aa13.26□□□□□ -0.29
CCHCR1-227ENST00000508852 ZIC2O95409 532 aaPredicted RBP13.26□□□□□ -0.29
CCHCR1-227ENST00000508852 KLK3P07288 261 aaPredicted RBP13.26□□□□□ -0.29
CCHCR1-227ENST00000508852 MSL3P1P0C860 447 aa13.26□□□□□ -0.29
CCHCR1-227ENST00000508852 ZNF28P17035 718 aa13.26□□□□□ -0.29
CCHCR1-227ENST00000508852 ZNF140P52738 457 aaPredicted RBP13.26□□□□□ -0.29
CCHCR1-227ENST00000508852 XIAPP98170 497 aa13.26□□□□□ -0.29
CCHCR1-227ENST00000508852 PLOD1Q02809 727 aaPredicted RBP13.26□□□□□ -0.29
CCHCR1-227ENST00000508852 DNASE1L3Q13609 305 aa13.26□□□□□ -0.29
CCHCR1-227ENST00000508852 CAPRIN2Q6IMN6 1127 aaKnown RBP13.26□□□□□ -0.29
CCHCR1-227ENST00000508852 CCDC110Q8TBZ0 833 aa13.26□□□□□ -0.29
CCHCR1-227ENST00000508852 STYXQ8WUJ0 223 aa13.26□□□□□ -0.29
CCHCR1-227ENST00000508852 ABHD17AQ96GS6 310 aa13.26□□□□□ -0.29
CCHCR1-227ENST00000508852 ELMO2Q96JJ3 720 aa13.26□□□□□ -0.29
CCHCR1-227ENST00000508852 LRFN5Q96NI6 719 aa13.26□□□□□ -0.29
CCHCR1-227ENST00000508852 MAP3K3Q99759 626 aa13.26□□□□□ -0.29
CCHCR1-227ENST00000508852 TWSG1Q9GZX9 223 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms