RNA–Protein interactions for RNA: ENST00000508635.5

UBE2D3-226, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 587 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-226ENST00000508635 VDRP11473 427 aa3.59□□□□□ -1.83
UBE2D3-226ENST00000508635 CD19P15391 556 aa3.59□□□□□ -1.83
UBE2D3-226ENST00000508635 PECAM1P16284 738 aaPredicted RBP3.59□□□□□ -1.83
UBE2D3-226ENST00000508635 BCKDHBP21953 392 aa3.59□□□□□ -1.83
UBE2D3-226ENST00000508635 GABRB3P28472 473 aa3.59□□□□□ -1.83
UBE2D3-226ENST00000508635 SERPINB3P29508 390 aa3.59□□□□□ -1.83
UBE2D3-226ENST00000508635 DIO1P49895 249 aa3.59□□□□□ -1.83
UBE2D3-226ENST00000508635 ZNF132P52740 706 aa3.59□□□□□ -1.83
UBE2D3-226ENST00000508635 LIMK1P53667 647 aa3.59□□□□□ -1.83
UBE2D3-226ENST00000508635 SLC8A3P57103 927 aa3.59□□□□□ -1.83
UBE2D3-226ENST00000508635 YWHAEP62258 255 aaKnown RBP3.59□□□□□ -1.83
UBE2D3-226ENST00000508635 COG7P83436 770 aa3.59□□□□□ -1.83
UBE2D3-226ENST00000508635 GCNT1Q02742 428 aa3.59□□□□□ -1.83
UBE2D3-226ENST00000508635 CREB5Q02930 508 aa3.59□□□□□ -1.83
UBE2D3-226ENST00000508635 BST2Q10589 180 aaKnown RBP3.59□□□□□ -1.83
UBE2D3-226ENST00000508635 CETN1Q12798 172 aa3.59□□□□□ -1.83
UBE2D3-226ENST00000508635 LMAN2Q12907 356 aa3.59□□□□□ -1.83
UBE2D3-226ENST00000508635 LRMPQ12912 555 aa3.59□□□□□ -1.83
UBE2D3-226ENST00000508635 GPS1Q13098 491 aa3.59□□□□□ -1.83
UBE2D3-226ENST00000508635 FHL3Q13643 280 aa3.59□□□□□ -1.83
UBE2D3-226ENST00000508635 SF3A2Q15428 464 aaKnown RBP3.59□□□□□ -1.83
UBE2D3-226ENST00000508635 CCDC6Q16204 474 aa3.59□□□□□ -1.83
UBE2D3-226ENST00000508635 STX1AQ16623 288 aa3.59□□□□□ -1.83
UBE2D3-226ENST00000508635 GOLGA7BQ2TAP0 167 aa3.59□□□□□ -1.83
UBE2D3-226ENST00000508635 CCDC40Q4G0X9 1142 aa3.59□□□□□ -1.83
UBE2D3-226ENST00000508635 EOGTQ5NDL2 527 aa3.59□□□□□ -1.83
UBE2D3-226ENST00000508635 C10orf76Q5T2E6 689 aa3.59□□□□□ -1.83
UBE2D3-226ENST00000508635 PRAMEF17Q5VTA0 474 aa3.59□□□□□ -1.83
UBE2D3-226ENST00000508635 PMS2CLQ68D20 193 aa3.59□□□□□ -1.83
UBE2D3-226ENST00000508635 FBXO38Q6PIJ6 1188 aa3.59□□□□□ -1.83
UBE2D3-226ENST00000508635 TMEM270Q6UE05 265 aa3.59□□□□□ -1.83
UBE2D3-226ENST00000508635 LCLAT1Q6UWP7 414 aa3.59□□□□□ -1.83
UBE2D3-226ENST00000508635 ZNF782Q6ZMW2 699 aaPredicted RBP3.59□□□□□ -1.83
UBE2D3-226ENST00000508635 TPGS1Q6ZTW0 290 aa3.59□□□□□ -1.83
UBE2D3-226ENST00000508635 KIAA0408Q6ZU52 694 aa3.59□□□□□ -1.83
UBE2D3-226ENST00000508635 TOGARAM2Q6ZUX3 1019 aa3.59□□□□□ -1.83
UBE2D3-226ENST00000508635 RSRC2Q7L4I2 434 aaKnown RBP3.59□□□□□ -1.83
UBE2D3-226ENST00000508635 RRAGAQ7L523 313 aa3.59□□□□□ -1.83
UBE2D3-226ENST00000508635 P3H2Q8IVL5 708 aa3.59□□□□□ -1.83
UBE2D3-226ENST00000508635 FAM114A1Q8IWE2 563 aa3.59□□□□□ -1.83
UBE2D3-226ENST00000508635 CCDC28AQ8IWP9 274 aa3.59□□□□□ -1.83
UBE2D3-226ENST00000508635 DHX40Q8IX18 779 aaKnown RBP3.59□□□□□ -1.83
UBE2D3-226ENST00000508635 SCML4Q8N228 414 aa3.59□□□□□ -1.83
UBE2D3-226ENST00000508635 ARHGAP18Q8N392 663 aa3.59□□□□□ -1.83
UBE2D3-226ENST00000508635 CPXM2Q8N436 756 aa3.59□□□□□ -1.83
UBE2D3-226ENST00000508635 FRMD1Q8N878 549 aa3.59□□□□□ -1.83
UBE2D3-226ENST00000508635 PNLDC1Q8NA58 520 aaKnown RBP3.59□□□□□ -1.83
UBE2D3-226ENST00000508635 ACRBPQ8NEB7 543 aa3.59□□□□□ -1.83
UBE2D3-226ENST00000508635 UBA3Q8TBC4 463 aa3.59□□□□□ -1.83
UBE2D3-226ENST00000508635 SLC35F5Q8WV83 523 aa3.59□□□□□ -1.83
UBE2D3-226ENST00000508635 RLN3Q8WXF3 142 aa3.59□□□□□ -1.83
UBE2D3-226ENST00000508635 DDB2Q92466 427 aa3.59□□□□□ -1.83
UBE2D3-226ENST00000508635 NDRG1Q92597 394 aaKnown RBP3.59□□□□□ -1.83
UBE2D3-226ENST00000508635 ZNF764Q96H86 408 aaPredicted RBP3.59□□□□□ -1.83
UBE2D3-226ENST00000508635 SGCZQ96LD1 299 aa3.59□□□□□ -1.83
UBE2D3-226ENST00000508635 XPO6Q96QU8 1125 aaKnown RBP3.59□□□□□ -1.83
UBE2D3-226ENST00000508635 ACOX2Q99424 681 aa3.59□□□□□ -1.83
UBE2D3-226ENST00000508635 GABRG3Q99928 467 aa3.59□□□□□ -1.83
UBE2D3-226ENST00000508635 TUBGCP2Q9BSJ2 902 aa3.59□□□□□ -1.83
UBE2D3-226ENST00000508635 SELENOOQ9BVL4 669 aa3.59□□□□□ -1.83
UBE2D3-226ENST00000508635 BBS2Q9BXC9 721 aa3.59□□□□□ -1.83
UBE2D3-226ENST00000508635 ULBP1Q9BZM6 244 aa3.59□□□□□ -1.83
UBE2D3-226ENST00000508635 NAT10Q9H0A0 1025 aaKnown RBP3.59□□□□□ -1.83
UBE2D3-226ENST00000508635 NDST4Q9H3R1 872 aa3.59□□□□□ -1.83
UBE2D3-226ENST00000508635 USP29Q9HBJ7 922 aa3.59□□□□□ -1.83
UBE2D3-226ENST00000508635 ZBTB26Q9HCK0 441 aa3.59□□□□□ -1.83
UBE2D3-226ENST00000508635 SIX2Q9NPC8 291 aa3.59□□□□□ -1.83
UBE2D3-226ENST00000508635 ZDHHC4Q9NPG8 344 aa3.59□□□□□ -1.83
UBE2D3-226ENST00000508635 NLRC4Q9NPP4 1024 aa3.59□□□□□ -1.83
UBE2D3-226ENST00000508635 CNGB3Q9NQW8 809 aa3.59□□□□□ -1.83
UBE2D3-226ENST00000508635 VPS45Q9NRW7 570 aa3.59□□□□□ -1.83
UBE2D3-226ENST00000508635 RXFP3Q9NSD7 469 aa3.59□□□□□ -1.83
UBE2D3-226ENST00000508635 SAMSN1Q9NSI8 373 aaKnown RBP3.59□□□□□ -1.83
UBE2D3-226ENST00000508635 DNAJC17Q9NVM6 304 aaKnown RBP3.59□□□□□ -1.83
UBE2D3-226ENST00000508635 PLK2Q9NYY3 685 aa3.59□□□□□ -1.83
UBE2D3-226ENST00000508635 LIMA1Q9UHB6 759 aaKnown RBP3.59□□□□□ -1.83
UBE2D3-226ENST00000508635 STEAP1Q9UHE8 339 aa3.59□□□□□ -1.83
UBE2D3-226ENST00000508635 RASAL2Q9UJF2 1139 aa3.59□□□□□ -1.83
UBE2D3-226ENST00000508635 CDC23Q9UJX2 597 aa3.59□□□□□ -1.83
UBE2D3-226ENST00000508635 LSM7Q9UK45 103 aaKnown RBP3.59□□□□□ -1.83
UBE2D3-226ENST00000508635 TSPAN16Q9UKR8 245 aa3.59□□□□□ -1.83
UBE2D3-226ENST00000508635 AGO1Q9UL18 857 aaKnown RBP3.59□□□□□ -1.83
UBE2D3-226ENST00000508635 ZNF510Q9Y2H8 683 aa3.59□□□□□ -1.83
UBE2D3-226ENST00000508635 NFE2L3Q9Y4A8 694 aa3.59□□□□□ -1.83
UBE2D3-226ENST00000508635 HELZP42694 1942 aaKnown RBP3.59□□□□□ -1.83
UBE2D3-226ENST00000508635 DNAH14Q0VDD8 3507 aa3.58□□□□□ -1.84
UBE2D3-226ENST00000508635 KIAA1549LQ6ZVL6 1849 aa3.58□□□□□ -1.84
UBE2D3-226ENST00000508635 ATG2BQ96BY7 2078 aa3.58□□□□□ -1.84
UBE2D3-226ENST00000508635 BCLAF3A2AJT9 711 aaKnown RBP3.58□□□□□ -1.84
UBE2D3-226ENST00000508635 YJEFN3A6XGL0 299 aa3.58□□□□□ -1.84
UBE2D3-226ENST00000508635 SMTNL1A8MU46 457 aa3.58□□□□□ -1.84
UBE2D3-226ENST00000508635 KCNJ18B7U540 433 aa3.58□□□□□ -1.84
UBE2D3-226ENST00000508635 WASH3PC4AMC7 463 aa3.58□□□□□ -1.84
UBE2D3-226ENST00000508635 E7ENQ6 273 aa3.58□□□□□ -1.84
UBE2D3-226ENST00000508635 M0QYV0 167 aa3.58□□□□□ -1.84
UBE2D3-226ENST00000508635 ZSCAN9O15535 394 aaPredicted RBP3.58□□□□□ -1.84
UBE2D3-226ENST00000508635 RBMXL2O75526 392 aaKnown RBP3.58□□□□□ -1.84
UBE2D3-226ENST00000508635 CALCAP01258 141 aa3.58□□□□□ -1.84
UBE2D3-226ENST00000508635 FYNP06241 537 aa3.58□□□□□ -1.84
UBE2D3-226ENST00000508635 SETSIPP0DME0 302 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms