RNA–Protein interactions for RNA: ENST00000508304.5

TRAPPC13-209, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 729 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-209ENST00000508304 RAD23AP54725 363 aa4.03□□□□□ -1.76
TRAPPC13-209ENST00000508304 CSNK2A1P68400 391 aaPredicted RBP4.03□□□□□ -1.76
TRAPPC13-209ENST00000508304 TFCP2Q12800 502 aa4.03□□□□□ -1.76
TRAPPC13-209ENST00000508304 PCLAFQ15004 111 aa4.03□□□□□ -1.76
TRAPPC13-209ENST00000508304 LETM2Q2VYF4 491 aa4.03□□□□□ -1.76
TRAPPC13-209ENST00000508304 USP41Q3LFD5 358 aa4.03□□□□□ -1.76
TRAPPC13-209ENST00000508304 CCDC92Q53HC0 331 aaPredicted RBP4.03□□□□□ -1.76
TRAPPC13-209ENST00000508304 ACSM2BQ68CK6 577 aa4.03□□□□□ -1.76
TRAPPC13-209ENST00000508304 GFRALQ6UXV0 394 aa4.03□□□□□ -1.76
TRAPPC13-209ENST00000508304 MFSD6Q6ZSS7 791 aa4.03□□□□□ -1.76
TRAPPC13-209ENST00000508304 FOXRED2Q8IWF2 684 aa4.03□□□□□ -1.76
TRAPPC13-209ENST00000508304 CCDC13Q8IYE1 715 aa4.03□□□□□ -1.76
TRAPPC13-209ENST00000508304 ARL10Q8N8L6 244 aa4.03□□□□□ -1.76
TRAPPC13-209ENST00000508304 CSNK2A3Q8NEV1 391 aa4.03□□□□□ -1.76
TRAPPC13-209ENST00000508304 SLC24A4Q8NFF2 622 aa4.03□□□□□ -1.76
TRAPPC13-209ENST00000508304 SETD6Q8TBK2 473 aa4.03□□□□□ -1.76
TRAPPC13-209ENST00000508304 SLC20A1Q8WUM9 679 aa4.03□□□□□ -1.76
TRAPPC13-209ENST00000508304 ABTB1Q969K4 478 aaPredicted RBP4.03□□□□□ -1.76
TRAPPC13-209ENST00000508304 ARHGEF26Q96DR7 871 aa4.03□□□□□ -1.76
TRAPPC13-209ENST00000508304 PABPC5Q96DU9 382 aaKnown RBP4.03□□□□□ -1.76
TRAPPC13-209ENST00000508304 SLC41A2Q96JW4 573 aa4.03□□□□□ -1.76
TRAPPC13-209ENST00000508304 QRFPRQ96P65 431 aa4.03□□□□□ -1.76
TRAPPC13-209ENST00000508304 PAFAH2Q99487 392 aa4.03□□□□□ -1.76
TRAPPC13-209ENST00000508304 CMKLR1Q99788 373 aa4.03□□□□□ -1.76
TRAPPC13-209ENST00000508304 C1QTNF1Q9BXJ1 281 aa4.03□□□□□ -1.76
TRAPPC13-209ENST00000508304 MRPL1Q9BYD6 325 aaKnown RBP4.03□□□□□ -1.76
TRAPPC13-209ENST00000508304 PLEKHA4Q9H4M7 779 aa4.03□□□□□ -1.76
TRAPPC13-209ENST00000508304 LTB4R2Q9NPC1 389 aa4.03□□□□□ -1.76
TRAPPC13-209ENST00000508304 TMEM30AQ9NV96 361 aa4.03□□□□□ -1.76
TRAPPC13-209ENST00000508304 PSD3Q9NYI0 1048 aa4.03□□□□□ -1.76
TRAPPC13-209ENST00000508304 AMACRQ9UHK6 382 aa4.03□□□□□ -1.76
TRAPPC13-209ENST00000508304 MAU2Q9Y6X3 613 aa4.03□□□□□ -1.76
TRAPPC13-209ENST00000508304 GREB1LQ9C091 1923 aaPredicted RBP4.03□□□□□ -1.76
TRAPPC13-209ENST00000508304 A0A1W2PQF6 199 aa4.02□□□□□ -1.77
TRAPPC13-209ENST00000508304 BICDL2A1A5D9 508 aa4.02□□□□□ -1.77
TRAPPC13-209ENST00000508304 OR2A25A4D2G3 310 aa4.02□□□□□ -1.77
TRAPPC13-209ENST00000508304 TRIM64A6NGJ6 449 aa4.02□□□□□ -1.77
TRAPPC13-209ENST00000508304 TRIM64BA6NI03 449 aa4.02□□□□□ -1.77
TRAPPC13-209ENST00000508304 SPINT2O43291 252 aa4.02□□□□□ -1.77
TRAPPC13-209ENST00000508304 ATP5BP06576 529 aaKnown RBP4.02□□□□□ -1.77
TRAPPC13-209ENST00000508304 TUBBP07437 444 aa4.02□□□□□ -1.77
TRAPPC13-209ENST00000508304 FDPSP14324 419 aaKnown RBP4.02□□□□□ -1.77
TRAPPC13-209ENST00000508304 ERCC2P18074 760 aa4.02□□□□□ -1.77
TRAPPC13-209ENST00000508304 CPT2P23786 658 aa4.02□□□□□ -1.77
TRAPPC13-209ENST00000508304 ATP5DP30049 168 aa4.02□□□□□ -1.77
TRAPPC13-209ENST00000508304 HOXA1P49639 335 aaPredicted RBP4.02□□□□□ -1.77
TRAPPC13-209ENST00000508304 PPP5CP53041 499 aa4.02□□□□□ -1.77
TRAPPC13-209ENST00000508304 TUBB4BP68371 445 aa4.02□□□□□ -1.77
TRAPPC13-209ENST00000508304 MRPS5P82675 430 aaKnown RBP4.02□□□□□ -1.77
TRAPPC13-209ENST00000508304 RBP5P82980 135 aa4.02□□□□□ -1.77
TRAPPC13-209ENST00000508304 BFSP1Q12934 665 aa4.02□□□□□ -1.77
TRAPPC13-209ENST00000508304 TNIP1Q15025 636 aa4.02□□□□□ -1.77
TRAPPC13-209ENST00000508304 KRTAP13-3Q3SY46 172 aa4.02□□□□□ -1.77
TRAPPC13-209ENST00000508304 ZNF876PQ49A33 203 aa4.02□□□□□ -1.77
TRAPPC13-209ENST00000508304 TMEM35AQ53FP2 167 aa4.02□□□□□ -1.77
TRAPPC13-209ENST00000508304 C6orf141Q5SZD1 244 aa4.02□□□□□ -1.77
TRAPPC13-209ENST00000508304 JADE1Q6IE81 842 aa4.02□□□□□ -1.77
TRAPPC13-209ENST00000508304 DUS1LQ6P1R4 473 aaKnown RBP4.02□□□□□ -1.77
TRAPPC13-209ENST00000508304 CACNA2D4Q7Z3S7 1137 aa4.02□□□□□ -1.77
TRAPPC13-209ENST00000508304 GTSCR1Q86UQ5 136 aa4.02□□□□□ -1.77
TRAPPC13-209ENST00000508304 TMEM219Q86XT9 240 aa4.02□□□□□ -1.77
TRAPPC13-209ENST00000508304 ZNF34Q8IZ26 560 aa4.02□□□□□ -1.77
TRAPPC13-209ENST00000508304 ZNF713Q8N859 430 aaPredicted RBP4.02□□□□□ -1.77
TRAPPC13-209ENST00000508304 TDRD5Q8NAT2 981 aaKnown RBP4.02□□□□□ -1.77
TRAPPC13-209ENST00000508304 ADAD2Q8NCV1 583 aaKnown RBP4.02□□□□□ -1.77
TRAPPC13-209ENST00000508304 DUSP19Q8WTR2 217 aa4.02□□□□□ -1.77
TRAPPC13-209ENST00000508304 ZNF583Q96ND8 569 aa4.02□□□□□ -1.77
TRAPPC13-209ENST00000508304 NUDCD1Q96RS6 583 aa4.02□□□□□ -1.77
TRAPPC13-209ENST00000508304 GAD1Q99259 594 aa4.02□□□□□ -1.77
TRAPPC13-209ENST00000508304 THUMPD3Q9BV44 507 aaKnown RBP4.02□□□□□ -1.77
TRAPPC13-209ENST00000508304 CSTL1Q9H114 145 aa4.02□□□□□ -1.77
TRAPPC13-209ENST00000508304 OPA3Q9H6K4 179 aa4.02□□□□□ -1.77
TRAPPC13-209ENST00000508304 SLC28A3Q9HAS3 691 aa4.02□□□□□ -1.77
TRAPPC13-209ENST00000508304 XAB2Q9HCS7 855 aaKnown RBP4.02□□□□□ -1.77
TRAPPC13-209ENST00000508304 CCL27Q9Y4X3 112 aa4.02□□□□□ -1.77
TRAPPC13-209ENST00000508304 CEPT1Q9Y6K0 416 aa4.02□□□□□ -1.77
TRAPPC13-209ENST00000508304 NOTCH2Q04721 2471 aa4.01□□□□□ -1.77
TRAPPC13-209ENST00000508304 A8MXE2 369 aa4.01□□□□□ -1.77
TRAPPC13-209ENST00000508304 CDRT15L2A8MXV6 281 aa4.01□□□□□ -1.77
TRAPPC13-209ENST00000508304 HCRTR2O43614 444 aa4.01□□□□□ -1.77
TRAPPC13-209ENST00000508304 WDR1O75083 606 aa4.01□□□□□ -1.77
TRAPPC13-209ENST00000508304 BAG2O95816 211 aa4.01□□□□□ -1.77
TRAPPC13-209ENST00000508304 EGFP01133 1207 aa4.01□□□□□ -1.77
TRAPPC13-209ENST00000508304 ACTN1P12814 892 aa4.01□□□□□ -1.77
TRAPPC13-209ENST00000508304 ATP6V1B1P15313 513 aa4.01□□□□□ -1.77
TRAPPC13-209ENST00000508304 GJA1P17302 382 aa4.01□□□□□ -1.77
TRAPPC13-209ENST00000508304 PON1P27169 355 aa4.01□□□□□ -1.77
TRAPPC13-209ENST00000508304 AMPHP49418 695 aa4.01□□□□□ -1.77
TRAPPC13-209ENST00000508304 ZNF41P51814 821 aaPredicted RBP4.01□□□□□ -1.77
TRAPPC13-209ENST00000508304 SNTB1Q13884 538 aaKnown RBP4.01□□□□□ -1.77
TRAPPC13-209ENST00000508304 GTF2H2Q13888 395 aa4.01□□□□□ -1.77
TRAPPC13-209ENST00000508304 KCNC3Q14003 757 aa4.01□□□□□ -1.77
TRAPPC13-209ENST00000508304 KRT33BQ14525 404 aa4.01□□□□□ -1.77
TRAPPC13-209ENST00000508304 ASTE1Q2TB18 679 aaPredicted RBP4.01□□□□□ -1.77
TRAPPC13-209ENST00000508304 KRBOX4Q5JUW0 171 aa4.01□□□□□ -1.77
TRAPPC13-209ENST00000508304 GTF2H2CQ6P1K8 395 aa4.01□□□□□ -1.77
TRAPPC13-209ENST00000508304 SUSD1Q6UWL2 747 aa4.01□□□□□ -1.77
TRAPPC13-209ENST00000508304 KCTD8Q6ZWB6 473 aa4.01□□□□□ -1.77
TRAPPC13-209ENST00000508304 HAPLN4Q86UW8 402 aa4.01□□□□□ -1.77
TRAPPC13-209ENST00000508304 GPR180Q86V85 440 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms