RNA–Protein interactions for RNA: ENST00000507533.1

DDR1-260, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 2

Gene DDR1, Length 545 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-260ENST00000507533 OR6C74A6NCV1 312 aa13.51□□□□□ -0.25
DDR1-260ENST00000507533 TMEM191CA6NGB0 347 aa13.51□□□□□ -0.25
DDR1-260ENST00000507533 SLC9B1P1A6NJY1 282 aa13.51□□□□□ -0.25
DDR1-260ENST00000507533 TMEM150CB9EJG8 249 aa13.51□□□□□ -0.25
DDR1-260ENST00000507533 ATMINO43313 823 aaPredicted RBP13.51□□□□□ -0.25
DDR1-260ENST00000507533 ARCN1P48444 511 aaKnown RBP13.51□□□□□ -0.25
DDR1-260ENST00000507533 DCDC1P59894 354 aa13.51□□□□□ -0.25
DDR1-260ENST00000507533 NIPAL4Q0D2K0 466 aa13.51□□□□□ -0.25
DDR1-260ENST00000507533 CDC16Q13042 620 aa13.51□□□□□ -0.25
DDR1-260ENST00000507533 DPYSL2Q16555 572 aa13.51□□□□□ -0.25
DDR1-260ENST00000507533 ZNF630Q2M218 657 aaPredicted RBP13.51□□□□□ -0.25
DDR1-260ENST00000507533 SMTNL2Q2TAL5 461 aa13.51□□□□□ -0.25
DDR1-260ENST00000507533 ZNF789Q5FWF6 425 aa13.51□□□□□ -0.25
DDR1-260ENST00000507533 VWA2Q5GFL6 755 aa13.51□□□□□ -0.25
DDR1-260ENST00000507533 MLIPQ5VWP3 458 aa13.51□□□□□ -0.25
DDR1-260ENST00000507533 PLEKHA7Q6IQ23 1121 aa13.51□□□□□ -0.25
DDR1-260ENST00000507533 BNC2Q6ZN30 1099 aaPredicted RBP13.51□□□□□ -0.25
DDR1-260ENST00000507533 GAS2L3Q86XJ1 694 aa13.51□□□□□ -0.25
DDR1-260ENST00000507533 LRRC49Q8IUZ0 686 aa13.51□□□□□ -0.25
DDR1-260ENST00000507533 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.51□□□□□ -0.25
DDR1-260ENST00000507533 PPP4R1Q8TF05 950 aa13.51□□□□□ -0.25
DDR1-260ENST00000507533 HSPH1Q92598 858 aa13.51□□□□□ -0.25
DDR1-260ENST00000507533 IQCDQ96DY2 449 aa13.51□□□□□ -0.25
DDR1-260ENST00000507533 TRIM7Q9C029 511 aa13.51□□□□□ -0.25
DDR1-260ENST00000507533 ZFYVE1Q9HBF4 777 aa13.51□□□□□ -0.25
DDR1-260ENST00000507533 ATP13A2Q9NQ11 1180 aa13.51□□□□□ -0.25
DDR1-260ENST00000507533 RAD18Q9NS91 495 aa13.51□□□□□ -0.25
DDR1-260ENST00000507533 PTRH2Q9Y3E5 179 aaKnown RBP13.51□□□□□ -0.25
DDR1-260ENST00000507533 MED13LQ71F56 2210 aa13.51□□□□□ -0.25
DDR1-260ENST00000507533 TMCO5BA8MYB1 307 aa13.5□□□□□ -0.25
DDR1-260ENST00000507533 KCNJ13O60928 360 aa13.5□□□□□ -0.25
DDR1-260ENST00000507533 CCDC172P0C7W6 258 aa13.5□□□□□ -0.25
DDR1-260ENST00000507533 FERP16591 822 aa13.5□□□□□ -0.25
DDR1-260ENST00000507533 IL1R2P27930 398 aa13.5□□□□□ -0.25
DDR1-260ENST00000507533 FOLR3P41439 243 aa13.5□□□□□ -0.25
DDR1-260ENST00000507533 PREPP48147 710 aa13.5□□□□□ -0.25
DDR1-260ENST00000507533 TMEM115Q12893 351 aaPredicted RBP13.5□□□□□ -0.25
DDR1-260ENST00000507533 GTF2H3Q13889 308 aa13.5□□□□□ -0.25
DDR1-260ENST00000507533 MRGPRGQ86SM5 289 aa13.5□□□□□ -0.25
DDR1-260ENST00000507533 AMZ2Q86W34 360 aa13.5□□□□□ -0.25
DDR1-260ENST00000507533 ZNF295-AS1Q8N0V1 137 aa13.5□□□□□ -0.25
DDR1-260ENST00000507533 COG1Q8WTW3 980 aa13.5□□□□□ -0.25
DDR1-260ENST00000507533 MAML1Q92585 1016 aa13.5□□□□□ -0.25
DDR1-260ENST00000507533 GBP5Q96PP8 586 aa13.5□□□□□ -0.25
DDR1-260ENST00000507533 SLX1AQ9BQ83 275 aa13.5□□□□□ -0.25
DDR1-260ENST00000507533 SYTL2Q9HCH5 934 aa13.5□□□□□ -0.25
DDR1-260ENST00000507533 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.5□□□□□ -0.25
DDR1-260ENST00000507533 IMP3Q9NV31 184 aaKnown RBP13.5□□□□□ -0.25
DDR1-260ENST00000507533 HAUS2Q9NVX0 235 aa13.5□□□□□ -0.25
DDR1-260ENST00000507533 TAS2R14Q9NYV8 317 aa13.5□□□□□ -0.25
DDR1-260ENST00000507533 SUCOQ9UBS9 1254 aaKnown RBP13.5□□□□□ -0.25
DDR1-260ENST00000507533 GPN3Q9UHW5 284 aaPredicted RBP13.5□□□□□ -0.25
DDR1-260ENST00000507533 SERTAD3Q9UJW9 196 aa13.5□□□□□ -0.25
DDR1-260ENST00000507533 SHOC2Q9UQ13 582 aa13.5□□□□□ -0.25
DDR1-260ENST00000507533 LRRC53A6NM62 1247 aa13.49□□□□□ -0.25
DDR1-260ENST00000507533 E7EQ34 232 aa13.49□□□□□ -0.25
DDR1-260ENST00000507533 MATN3O15232 486 aa13.49□□□□□ -0.25
DDR1-260ENST00000507533 ZNF749O43361 778 aa13.49□□□□□ -0.25
DDR1-260ENST00000507533 JRKO75564 520 aa13.49□□□□□ -0.25
DDR1-260ENST00000507533 SLC4A1P02730 911 aa13.49□□□□□ -0.25
DDR1-260ENST00000507533 HBQ1P09105 142 aa13.49□□□□□ -0.25
DDR1-260ENST00000507533 CDH3P22223 829 aa13.49□□□□□ -0.25
DDR1-260ENST00000507533 XRCC4Q13426 336 aa13.49□□□□□ -0.25
DDR1-260ENST00000507533 ZNF169Q14929 603 aaPredicted RBP13.49□□□□□ -0.25
DDR1-260ENST00000507533 CYP2A13Q16696 494 aa13.49□□□□□ -0.25
DDR1-260ENST00000507533 BOLA3Q53S33 107 aa13.49□□□□□ -0.25
DDR1-260ENST00000507533 ZNF385CQ66K41 422 aaPredicted RBP13.49□□□□□ -0.25
DDR1-260ENST00000507533 B3GNTL1Q67FW5 361 aaPredicted RBP13.49□□□□□ -0.25
DDR1-260ENST00000507533 SARM1Q6SZW1 724 aa13.49□□□□□ -0.25
DDR1-260ENST00000507533 FAM180AQ6UWF9 173 aa13.49□□□□□ -0.25
DDR1-260ENST00000507533 FAM83HQ6ZRV2 1179 aaPredicted RBP13.49□□□□□ -0.25
DDR1-260ENST00000507533 B4GALNT4Q76KP1 1039 aa13.49□□□□□ -0.25
DDR1-260ENST00000507533 GDAP1Q8TB36 358 aa13.49□□□□□ -0.25
DDR1-260ENST00000507533 CNDP1Q96KN2 507 aa13.49□□□□□ -0.25
DDR1-260ENST00000507533 AGAP3Q96P47 875 aa13.49□□□□□ -0.25
DDR1-260ENST00000507533 C17orf62Q9BQA9 187 aa13.49□□□□□ -0.25
DDR1-260ENST00000507533 ADGRE3Q9BY15 652 aa13.49□□□□□ -0.25
DDR1-260ENST00000507533 OLAHQ9NV23 265 aa13.49□□□□□ -0.25
DDR1-260ENST00000507533 NFKBIL1Q9UBC1 381 aaPredicted RBP13.49□□□□□ -0.25
DDR1-260ENST00000507533 AMACRQ9UHK6 382 aa13.49□□□□□ -0.25
DDR1-260ENST00000507533 TMPRSS11EQ9UL52 423 aa13.49□□□□□ -0.25
DDR1-260ENST00000507533 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.49□□□□□ -0.25
DDR1-260ENST00000507533 CFAP20Q9Y6A4 193 aaKnown RBP13.49□□□□□ -0.25
DDR1-260ENST00000507533 PIKFYVEQ9Y2I7 2098 aa13.49□□□□□ -0.25
DDR1-260ENST00000507533 PRICKLE3O43900 615 aaPredicted RBP13.48□□□□□ -0.25
DDR1-260ENST00000507533 POP7O75817 140 aaKnown RBP13.48□□□□□ -0.25
DDR1-260ENST00000507533 HLA-DQB2P05538 268 aa13.48□□□□□ -0.25
DDR1-260ENST00000507533 PIRTP0C851 137 aa13.48□□□□□ -0.25
DDR1-260ENST00000507533 ATXN8OSP0DMR3 200 aa13.48□□□□□ -0.25
DDR1-260ENST00000507533 CBSLP0DN79 551 aa13.48□□□□□ -0.25
DDR1-260ENST00000507533 MTHFD1P11586 935 aaKnown RBP13.48□□□□□ -0.25
DDR1-260ENST00000507533 POLR2CP19387 275 aaPredicted RBP13.48□□□□□ -0.25
DDR1-260ENST00000507533 SSTR2P30874 369 aa13.48□□□□□ -0.25
DDR1-260ENST00000507533 CBSP35520 551 aa13.48□□□□□ -0.25
DDR1-260ENST00000507533 PCK1P35558 622 aa13.48□□□□□ -0.25
DDR1-260ENST00000507533 CD86P42081 329 aa13.48□□□□□ -0.25
DDR1-260ENST00000507533 KCNK10P57789 538 aa13.48□□□□□ -0.25
DDR1-260ENST00000507533 KRTAP10-9P60411 292 aa13.48□□□□□ -0.25
DDR1-260ENST00000507533 OTUD4Q01804 1114 aaKnown RBP13.48□□□□□ -0.25
DDR1-260ENST00000507533 DMPKQ09013 629 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms