RNA–Protein interactions for RNA: ENST00000505804.1

TOPBP1-204, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 472 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-204ENST00000505804 HEPACAM2A8MVW5 462 aa3.82□□□□□ -1.8
TOPBP1-204ENST00000505804 MAGEB17A8MXT2 336 aa3.82□□□□□ -1.8
TOPBP1-204ENST00000505804 FIBPO43427 364 aa3.82□□□□□ -1.8
TOPBP1-204ENST00000505804 SSX4O60224 188 aa3.82□□□□□ -1.8
TOPBP1-204ENST00000505804 GPR137BO60478 399 aa3.82□□□□□ -1.8
TOPBP1-204ENST00000505804 IGHV4-39P01824 125 aa3.82□□□□□ -1.8
TOPBP1-204ENST00000505804 ADRB2P07550 413 aa3.82□□□□□ -1.8
TOPBP1-204ENST00000505804 VPREB1P12018 145 aa3.82□□□□□ -1.8
TOPBP1-204ENST00000505804 GJA1P17302 382 aa3.82□□□□□ -1.8
TOPBP1-204ENST00000505804 CBLP22681 906 aa3.82□□□□□ -1.8
TOPBP1-204ENST00000505804 MCCP23508 829 aa3.82□□□□□ -1.8
TOPBP1-204ENST00000505804 PSMC4P43686 418 aa3.82□□□□□ -1.8
TOPBP1-204ENST00000505804 LMAN1P49257 510 aa3.82□□□□□ -1.8
TOPBP1-204ENST00000505804 HOXA1P49639 335 aaPredicted RBP3.82□□□□□ -1.8
TOPBP1-204ENST00000505804 MMP15P51511 669 aa3.82□□□□□ -1.8
TOPBP1-204ENST00000505804 MBTD1Q05BQ5 628 aa3.82□□□□□ -1.8
TOPBP1-204ENST00000505804 KRTAP1-1Q07627 177 aa3.82□□□□□ -1.8
TOPBP1-204ENST00000505804 GAGE5Q13069 117 aa3.82□□□□□ -1.8
TOPBP1-204ENST00000505804 GAGE6Q13070 117 aa3.82□□□□□ -1.8
TOPBP1-204ENST00000505804 PLA2G7Q13093 441 aa3.82□□□□□ -1.8
TOPBP1-204ENST00000505804 ACCSLQ4AC99 568 aa3.82□□□□□ -1.8
TOPBP1-204ENST00000505804 ADALQ6DHV7 355 aa3.82□□□□□ -1.8
TOPBP1-204ENST00000505804 GPR139Q6DWJ6 353 aa3.82□□□□□ -1.8
TOPBP1-204ENST00000505804 KLC3Q6P597 504 aa3.82□□□□□ -1.8
TOPBP1-204ENST00000505804 TEX38Q6PEX7 206 aa3.82□□□□□ -1.8
TOPBP1-204ENST00000505804 FIGLAQ6QHK4 219 aa3.82□□□□□ -1.8
TOPBP1-204ENST00000505804 PACS1Q6VY07 963 aa3.82□□□□□ -1.8
TOPBP1-204ENST00000505804 BHLHA9Q7RTU4 235 aa3.82□□□□□ -1.8
TOPBP1-204ENST00000505804 ADGRA1Q86SQ6 560 aa3.82□□□□□ -1.8
TOPBP1-204ENST00000505804 NFE4Q86UQ8 179 aa3.82□□□□□ -1.8
TOPBP1-204ENST00000505804 CEP57Q86XR8 500 aa3.82□□□□□ -1.8
TOPBP1-204ENST00000505804 CCDC89Q8N998 374 aa3.82□□□□□ -1.8
TOPBP1-204ENST00000505804 ZNF622Q969S3 477 aaKnown RBP eCLIP3.82□□□□□ -1.8
TOPBP1-204ENST00000505804 ALG14Q96F25 216 aa3.82□□□□□ -1.8
TOPBP1-204ENST00000505804 OR6C1Q96RD1 312 aa3.82□□□□□ -1.8
TOPBP1-204ENST00000505804 NODALQ96S42 347 aa3.82□□□□□ -1.8
TOPBP1-204ENST00000505804 EPYCQ99645 322 aa3.82□□□□□ -1.8
TOPBP1-204ENST00000505804 SLF1Q9BQI6 1058 aa3.82□□□□□ -1.8
TOPBP1-204ENST00000505804 SLC35C2Q9NQQ7 365 aa3.82□□□□□ -1.8
TOPBP1-204ENST00000505804 SLC38A7Q9NVC3 462 aa3.82□□□□□ -1.8
TOPBP1-204ENST00000505804 PPIEQ9UNP9 301 aaKnown RBP3.82□□□□□ -1.8
TOPBP1-204ENST00000505804 FAM169AQ9Y6X4 670 aa3.82□□□□□ -1.8
TOPBP1-204ENST00000505804 ZNF541Q9H0D2 1346 aa3.81□□□□□ -1.8
TOPBP1-204ENST00000505804 P2RY10O00398 339 aa3.81□□□□□ -1.8
TOPBP1-204ENST00000505804 XRCC3O43542 346 aa3.81□□□□□ -1.8
TOPBP1-204ENST00000505804 PRAMEF11O60813 436 aa3.81□□□□□ -1.8
TOPBP1-204ENST00000505804 PDE9AO76083 593 aa3.81□□□□□ -1.8
TOPBP1-204ENST00000505804 LDLRP01130 860 aa3.81□□□□□ -1.8
TOPBP1-204ENST00000505804 DNASE1P24855 282 aa3.81□□□□□ -1.8
TOPBP1-204ENST00000505804 MATR3P43243 847 aaKnown RBP eCLIP3.81□□□□□ -1.8
TOPBP1-204ENST00000505804 LIG4P49917 911 aa3.81□□□□□ -1.8
TOPBP1-204ENST00000505804 CDH13P55290 713 aa3.81□□□□□ -1.8
TOPBP1-204ENST00000505804 ASPRV1Q53RT3 343 aa3.81□□□□□ -1.8
TOPBP1-204ENST00000505804 STPG1Q5TH74 334 aa3.81□□□□□ -1.8
TOPBP1-204ENST00000505804 TMEM211Q6ICI0 200 aa3.81□□□□□ -1.8
TOPBP1-204ENST00000505804 DENND5BQ6ZUT9 1274 aa3.81□□□□□ -1.8
TOPBP1-204ENST00000505804 SLC26A9Q7LBE3 791 aa3.81□□□□□ -1.8
TOPBP1-204ENST00000505804 CRYBG2Q8N1P7 616 aa3.81□□□□□ -1.8
TOPBP1-204ENST00000505804 LPGAT1Q92604 370 aa3.81□□□□□ -1.8
TOPBP1-204ENST00000505804 DAZLQ92904 295 aaKnown RBP3.81□□□□□ -1.8
TOPBP1-204ENST00000505804 ST6GAL2Q96JF0 529 aa3.81□□□□□ -1.8
TOPBP1-204ENST00000505804 C17orf77Q96MU5 243 aa3.81□□□□□ -1.8
TOPBP1-204ENST00000505804 NEK1Q96PY6 1258 aa3.81□□□□□ -1.8
TOPBP1-204ENST00000505804 KRTAP1-5Q9BYS1 174 aa3.81□□□□□ -1.8
TOPBP1-204ENST00000505804 GOLPH3LQ9H4A5 285 aa3.81□□□□□ -1.8
TOPBP1-204ENST00000505804 PELI2Q9HAT8 420 aa3.81□□□□□ -1.8
TOPBP1-204ENST00000505804 UPF2Q9HAU5 1272 aaKnown RBP3.81□□□□□ -1.8
TOPBP1-204ENST00000505804 SDF2L1Q9HCN8 221 aa3.81□□□□□ -1.8
TOPBP1-204ENST00000505804 GDE1Q9NZC3 331 aa3.81□□□□□ -1.8
TOPBP1-204ENST00000505804 RHCGQ9UBD6 479 aa3.81□□□□□ -1.8
TOPBP1-204ENST00000505804 CRNNQ9UBG3 495 aaPredicted RBP3.81□□□□□ -1.8
TOPBP1-204ENST00000505804 WBP11Q9Y2W2 641 aaKnown RBP3.81□□□□□ -1.8
TOPBP1-204ENST00000505804 A0A1W2PPI3 338 aa3.8□□□□□ -1.8
TOPBP1-204ENST00000505804 ELOVL7A1L3X0 281 aa3.8□□□□□ -1.8
TOPBP1-204ENST00000505804 P4HA2O15460 535 aa3.8□□□□□ -1.8
TOPBP1-204ENST00000505804 FGF17O60258 216 aa3.8□□□□□ -1.8
TOPBP1-204ENST00000505804 ACP2P11117 423 aa3.8□□□□□ -1.8
TOPBP1-204ENST00000505804 CKMT2P17540 419 aa3.8□□□□□ -1.8
TOPBP1-204ENST00000505804 CDK3Q00526 305 aa3.8□□□□□ -1.8
TOPBP1-204ENST00000505804 NUCB1Q02818 461 aa3.8□□□□□ -1.8
TOPBP1-204ENST00000505804 KCTD2Q14681 263 aa3.8□□□□□ -1.8
TOPBP1-204ENST00000505804 KIR2DS3Q14952 304 aa3.8□□□□□ -1.8
TOPBP1-204ENST00000505804 C19orf48Q6RUI8 117 aa3.8□□□□□ -1.8
TOPBP1-204ENST00000505804 ANO5Q75V66 913 aa3.8□□□□□ -1.8
TOPBP1-204ENST00000505804 PRPF39Q86UA1 669 aaKnown RBP3.8□□□□□ -1.8
TOPBP1-204ENST00000505804 LMNTD1Q8N9Z9 388 aa3.8□□□□□ -1.8
TOPBP1-204ENST00000505804 L3MBTL4Q8NA19 623 aa3.8□□□□□ -1.8
TOPBP1-204ENST00000505804 OR2AJ1Q8NGZ0 328 aa3.8□□□□□ -1.8
TOPBP1-204ENST00000505804 LRRC8CQ8TDW0 803 aa3.8□□□□□ -1.8
TOPBP1-204ENST00000505804 OLFM1Q99784 485 aa3.8□□□□□ -1.8
TOPBP1-204ENST00000505804 MRPL1Q9BYD6 325 aaKnown RBP3.8□□□□□ -1.8
TOPBP1-204ENST00000505804 TFB2MQ9H5Q4 396 aaKnown RBP3.8□□□□□ -1.8
TOPBP1-204ENST00000505804 APOBEC3GQ9HC16 384 aaKnown RBP3.8□□□□□ -1.8
TOPBP1-204ENST00000505804 NKIRAS2Q9NYR9 191 aa3.8□□□□□ -1.8
TOPBP1-204ENST00000505804 MORF4L1Q9UBU8 362 aa3.8□□□□□ -1.8
TOPBP1-204ENST00000505804 JRKLQ9Y4A0 524 aa3.8□□□□□ -1.8
TOPBP1-204ENST00000505804 TTLL3Q9Y4R7 772 aa3.8□□□□□ -1.8
TOPBP1-204ENST00000505804 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP3.8□□□□□ -1.8
TOPBP1-204ENST00000505804 SPIN1Q9Y657 262 aaPredicted RBP3.8□□□□□ -1.8
TOPBP1-204ENST00000505804 SMCHD1A6NHR9 2005 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms