RNA–Protein interactions for RNA: ENST00000504012.1

LINC01340-201, Transcript of long intergenic non-protein coding RNA 1340, humanhuman

TSL 3 BASIC

Gene LINC01340, Length 724 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01340-201ENST00000504012 C9orf62Q8N4C0 152 aa5.9□□□□□ -1.46
LINC01340-201ENST00000504012 CPA6Q8N4T0 437 aa5.9□□□□□ -1.46
LINC01340-201ENST00000504012 MYCT1Q8N699 235 aa5.9□□□□□ -1.46
LINC01340-201ENST00000504012 PCDH20Q8N6Y1 951 aaKnown RBP5.9□□□□□ -1.46
LINC01340-201ENST00000504012 PLD5Q8N7P1 536 aa5.9□□□□□ -1.46
LINC01340-201ENST00000504012 GLB1L3Q8NCI6 653 aaPredicted RBP5.9□□□□□ -1.46
LINC01340-201ENST00000504012 ZBTB44Q8NCP5 570 aa5.9□□□□□ -1.46
LINC01340-201ENST00000504012 CLRN3Q8NCR9 226 aa5.9□□□□□ -1.46
LINC01340-201ENST00000504012 FAM156AQ8NDB6 213 aa5.9□□□□□ -1.46
LINC01340-201ENST00000504012 FBXL13Q8NEE6 735 aa5.9□□□□□ -1.46
LINC01340-201ENST00000504012 C7orf57Q8NEG2 295 aa5.9□□□□□ -1.46
LINC01340-201ENST00000504012 DUSP18Q8NEJ0 188 aa5.9□□□□□ -1.46
LINC01340-201ENST00000504012 OR52E4Q8NGH9 312 aa5.9□□□□□ -1.46
LINC01340-201ENST00000504012 OR52N1Q8NH53 320 aa5.9□□□□□ -1.46
LINC01340-201ENST00000504012 TRPM4Q8TD43 1214 aa5.9□□□□□ -1.46
LINC01340-201ENST00000504012 ASB15Q8WXK1 588 aa5.9□□□□□ -1.46
LINC01340-201ENST00000504012 POMGNT1Q8WZA1 660 aa5.9□□□□□ -1.46
LINC01340-201ENST00000504012 ATOH1Q92858 354 aaPredicted RBP5.9□□□□□ -1.46
LINC01340-201ENST00000504012 PTERQ96BW5 349 aa5.9□□□□□ -1.46
LINC01340-201ENST00000504012 FAF2Q96CS3 445 aa5.9□□□□□ -1.46
LINC01340-201ENST00000504012 TUBGCP3Q96CW5 907 aa5.9□□□□□ -1.46
LINC01340-201ENST00000504012 MSANTD3Q96H12 275 aa5.9□□□□□ -1.46
LINC01340-201ENST00000504012 ACCSQ96QU6 501 aa5.9□□□□□ -1.46
LINC01340-201ENST00000504012 SIGLEC11Q96RL6 698 aa5.9□□□□□ -1.46
LINC01340-201ENST00000504012 GAD1Q99259 594 aa5.9□□□□□ -1.46
LINC01340-201ENST00000504012 CGRRF1Q99675 332 aa5.9□□□□□ -1.46
LINC01340-201ENST00000504012 CPNE1Q99829 537 aa5.9□□□□□ -1.46
LINC01340-201ENST00000504012 RBM4BQ9BQ04 359 aaKnown RBP5.9□□□□□ -1.46
LINC01340-201ENST00000504012 HTATIP2Q9BUP3 242 aa5.9□□□□□ -1.46
LINC01340-201ENST00000504012 RBM4Q9BWF3 364 aaKnown RBP5.9□□□□□ -1.46
LINC01340-201ENST00000504012 HDHD5Q9BXW7 423 aa5.9□□□□□ -1.46
LINC01340-201ENST00000504012 DGCR6LQ9BY27 220 aa5.9□□□□□ -1.46
LINC01340-201ENST00000504012 TRIM54Q9BYV2 358 aa5.9□□□□□ -1.46
LINC01340-201ENST00000504012 SDCBP2Q9H190 292 aa5.9□□□□□ -1.46
LINC01340-201ENST00000504012 RNPEPQ9H4A4 650 aa5.9□□□□□ -1.46
LINC01340-201ENST00000504012 WDR55Q9H6Y2 383 aaPredicted RBP5.9□□□□□ -1.46
LINC01340-201ENST00000504012 TRIM45Q9H8W5 580 aaPredicted RBP5.9□□□□□ -1.46
LINC01340-201ENST00000504012 RNF121Q9H920 327 aa5.9□□□□□ -1.46
LINC01340-201ENST00000504012 MCCC2Q9HCC0 563 aa5.9□□□□□ -1.46
LINC01340-201ENST00000504012 IL1RAPQ9NPH3 570 aa5.9□□□□□ -1.46
LINC01340-201ENST00000504012 SLC35C2Q9NQQ7 365 aa5.9□□□□□ -1.46
LINC01340-201ENST00000504012 KCNH7Q9NS40 1196 aa5.9□□□□□ -1.46
LINC01340-201ENST00000504012 PIH1D1Q9NWS0 290 aaKnown RBP5.9□□□□□ -1.46
LINC01340-201ENST00000504012 LYARQ9NX58 379 aaKnown RBP5.9□□□□□ -1.46
LINC01340-201ENST00000504012 RBAKQ9NYW8 714 aaPredicted RBP5.9□□□□□ -1.46
LINC01340-201ENST00000504012 ERAP1Q9NZ08 941 aa5.9□□□□□ -1.46
LINC01340-201ENST00000504012 ZNF224Q9NZL3 707 aa5.9□□□□□ -1.46
LINC01340-201ENST00000504012 ARHGAP28Q9P2N2 729 aa5.9□□□□□ -1.46
LINC01340-201ENST00000504012 SLC9A2Q9UBY0 812 aa5.9□□□□□ -1.46
LINC01340-201ENST00000504012 NUFIP1Q9UHK0 495 aaKnown RBP5.9□□□□□ -1.46
LINC01340-201ENST00000504012 ING4Q9UNL4 249 aa5.9□□□□□ -1.46
LINC01340-201ENST00000504012 AURKCQ9UQB9 309 aa5.9□□□□□ -1.46
LINC01340-201ENST00000504012 DERAQ9Y315 318 aa5.9□□□□□ -1.46
LINC01340-201ENST00000504012 MFHAS1Q9Y4C4 1052 aa5.9□□□□□ -1.46
LINC01340-201ENST00000504012 SESN1Q9Y6P5 492 aa5.9□□□□□ -1.46
LINC01340-201ENST00000504012 DDX60LQ5H9U9 1706 aaKnown RBP5.9□□□□□ -1.47
LINC01340-201ENST00000504012 BAZ2BQ9UIF8 2168 aaKnown RBP5.9□□□□□ -1.47
LINC01340-201ENST00000504012 RGPD2P0DJD1 1756 aa5.89□□□□□ -1.47
LINC01340-201ENST00000504012 CYP2D7A0A087X1C5 515 aa5.89□□□□□ -1.47
LINC01340-201ENST00000504012 RPS10-NUDT3A0A1W2PQS6 291 aa5.89□□□□□ -1.47
LINC01340-201ENST00000504012 WDR64B1ANS9 1081 aa5.89□□□□□ -1.47
LINC01340-201ENST00000504012 B4DXG7 233 aa5.89□□□□□ -1.47
LINC01340-201ENST00000504012 UPK1AO00322 258 aa5.89□□□□□ -1.47
LINC01340-201ENST00000504012 TPP1O14773 563 aa5.89□□□□□ -1.47
LINC01340-201ENST00000504012 DSCR3O14972 297 aa5.89□□□□□ -1.47
LINC01340-201ENST00000504012 ZBTB39O15060 712 aa5.89□□□□□ -1.47
LINC01340-201ENST00000504012 ARPC2O15144 300 aa5.89□□□□□ -1.47
LINC01340-201ENST00000504012 UBDO15205 165 aa5.89□□□□□ -1.47
LINC01340-201ENST00000504012 B4GAT1O43505 415 aa5.89□□□□□ -1.47
LINC01340-201ENST00000504012 RGS10O43665 173 aa5.89□□□□□ -1.47
LINC01340-201ENST00000504012 AIREO43918 545 aa5.89□□□□□ -1.47
LINC01340-201ENST00000504012 CST8O60676 142 aa5.89□□□□□ -1.47
LINC01340-201ENST00000504012 VPS26AO75436 327 aa5.89□□□□□ -1.47
LINC01340-201ENST00000504012 SCO1O75880 301 aa5.89□□□□□ -1.47
LINC01340-201ENST00000504012 PIAS1O75925 651 aa5.89□□□□□ -1.47
LINC01340-201ENST00000504012 SOX30O94993 753 aa5.89□□□□□ -1.47
LINC01340-201ENST00000504012 RASGRP1O95267 797 aa5.89□□□□□ -1.47
LINC01340-201ENST00000504012 CYP11A1P05108 521 aa5.89□□□□□ -1.47
LINC01340-201ENST00000504012 C2P06681 752 aa5.89□□□□□ -1.47
LINC01340-201ENST00000504012 CCNYL3P0C7X3 344 aa5.89□□□□□ -1.47
LINC01340-201ENST00000504012 HLA-EP13747 358 aa5.89□□□□□ -1.47
LINC01340-201ENST00000504012 PDGFRAP16234 1089 aa5.89□□□□□ -1.47
LINC01340-201ENST00000504012 CD36P16671 472 aa5.89□□□□□ -1.47
LINC01340-201ENST00000504012 TFE3P19532 575 aaPredicted RBP5.89□□□□□ -1.47
LINC01340-201ENST00000504012 POU3F3P20264 500 aaPredicted RBP5.89□□□□□ -1.47
LINC01340-201ENST00000504012 MSH3P20585 1137 aa5.89□□□□□ -1.47
LINC01340-201ENST00000504012 C4BPBP20851 252 aa5.89□□□□□ -1.47
LINC01340-201ENST00000504012 PTBP1P26599 531 aaKnown RBP eCLIP5.89□□□□□ -1.47
LINC01340-201ENST00000504012 SPAM1P38567 509 aa5.89□□□□□ -1.47
LINC01340-201ENST00000504012 CTSKP43235 329 aa5.89□□□□□ -1.47
LINC01340-201ENST00000504012 PPP3CCP48454 512 aa5.89□□□□□ -1.47
LINC01340-201ENST00000504012 GCLMP48507 274 aa5.89□□□□□ -1.47
LINC01340-201ENST00000504012 GDI2P50395 445 aaKnown RBP5.89□□□□□ -1.47
LINC01340-201ENST00000504012 CSRP3P50461 194 aa5.89□□□□□ -1.47
LINC01340-201ENST00000504012 CLCN5P51795 746 aa5.89□□□□□ -1.47
LINC01340-201ENST00000504012 SLC7A2P52569 658 aa5.89□□□□□ -1.47
LINC01340-201ENST00000504012 GDF10P55107 478 aa5.89□□□□□ -1.47
LINC01340-201ENST00000504012 CDH8P55286 799 aa5.89□□□□□ -1.47
LINC01340-201ENST00000504012 FCGRTP55899 365 aa5.89□□□□□ -1.47
LINC01340-201ENST00000504012 SNAP25P60880 206 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms