RNA–Protein interactions for RNA: ENST00000503291.5

CDC42SE2-206, Transcript of CDC42 small effector 2, humanhuman

TSL 1 (best) BASIC

Gene CDC42SE2, Length 2,025 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-206ENST00000503291 CAMSAP3Q9P1Y5 1249 aaPredicted RBP20.02■□□□□ 0.79
CDC42SE2-206ENST00000503291 FRYLO94915 3013 aa20.01■□□□□ 0.79
CDC42SE2-206ENST00000503291 LIN7AO14910 233 aaPredicted RBP20.01■□□□□ 0.79
CDC42SE2-206ENST00000503291 KCNJ13O60928 360 aa20.01■□□□□ 0.79
CDC42SE2-206ENST00000503291 SLCO2B1O94956 709 aa20.01■□□□□ 0.79
CDC42SE2-206ENST00000503291 CCDC166P0CW27 439 aa20.01■□□□□ 0.79
CDC42SE2-206ENST00000503291 NME1P15531 152 aaKnown RBP20.01■□□□□ 0.79
CDC42SE2-206ENST00000503291 DGKAP23743 735 aa20.01■□□□□ 0.79
CDC42SE2-206ENST00000503291 CTSKP43235 329 aa20.01■□□□□ 0.79
CDC42SE2-206ENST00000503291 IL2P60568 153 aa20.01■□□□□ 0.79
CDC42SE2-206ENST00000503291 IRF9Q00978 393 aa20.01■□□□□ 0.79
CDC42SE2-206ENST00000503291 CTBSQ01459 385 aa20.01■□□□□ 0.79
CDC42SE2-206ENST00000503291 LRP8Q14114 963 aa20.01■□□□□ 0.79
CDC42SE2-206ENST00000503291 SYTL3Q4VX76 610 aa20.01■□□□□ 0.79
CDC42SE2-206ENST00000503291 METRNLQ641Q3 311 aa20.01■□□□□ 0.79
CDC42SE2-206ENST00000503291 RABEPKQ7Z6M1 372 aa20.01■□□□□ 0.79
CDC42SE2-206ENST00000503291 VRK3Q8IV63 474 aa20.01■□□□□ 0.79
CDC42SE2-206ENST00000503291 SPATA6LQ8N4H0 392 aa20.01■□□□□ 0.79
CDC42SE2-206ENST00000503291 CABS1Q96KC9 395 aa20.01■□□□□ 0.79
CDC42SE2-206ENST00000503291 UBXN10Q96LJ8 280 aa20.01■□□□□ 0.79
CDC42SE2-206ENST00000503291 ARRDC1-AS1Q9H2J1 176 aa20.01■□□□□ 0.79
CDC42SE2-206ENST00000503291 ERVMER34-1Q9H9K5 563 aa20.01■□□□□ 0.79
CDC42SE2-206ENST00000503291 SENP1Q9P0U3 644 aa20.01■□□□□ 0.79
CDC42SE2-206ENST00000503291 APOBEC3BQ9UH17 382 aaKnown RBP20.01■□□□□ 0.79
CDC42SE2-206ENST00000503291 SMG5Q9UPR3 1016 aaKnown RBP20.01■□□□□ 0.79
CDC42SE2-206ENST00000503291 CACNA1EQ15878 2313 aa20.01■□□□□ 0.79
CDC42SE2-206ENST00000503291 DNAH14Q0VDD8 3507 aa20■□□□□ 0.79
CDC42SE2-206ENST00000503291 A0A087X1B8 175 aa20■□□□□ 0.79
CDC42SE2-206ENST00000503291 PATE3B3GLJ2 98 aa20■□□□□ 0.79
CDC42SE2-206ENST00000503291 EPN2O95208 641 aa20■□□□□ 0.79
CDC42SE2-206ENST00000503291 CTSEP14091 401 aa20■□□□□ 0.79
CDC42SE2-206ENST00000503291 CREB1P16220 341 aa20■□□□□ 0.79
CDC42SE2-206ENST00000503291 PDHA2P29803 388 aa20■□□□□ 0.79
CDC42SE2-206ENST00000503291 PREPP48147 710 aa20■□□□□ 0.79
CDC42SE2-206ENST00000503291 DMPKQ09013 629 aa20■□□□□ 0.79
CDC42SE2-206ENST00000503291 GBX1Q14549 363 aa20■□□□□ 0.79
CDC42SE2-206ENST00000503291 TTMPQ5BVD1 217 aa20■□□□□ 0.79
CDC42SE2-206ENST00000503291 CCDC91Q7Z6B0 441 aa20■□□□□ 0.79
CDC42SE2-206ENST00000503291 TBC1D1Q86TI0 1168 aaPredicted RBP20■□□□□ 0.79
CDC42SE2-206ENST00000503291 NKAPQ8N5F7 415 aaKnown RBP20■□□□□ 0.79
CDC42SE2-206ENST00000503291 TLCD1Q96CP7 247 aa20■□□□□ 0.79
CDC42SE2-206ENST00000503291 ATP6V1G3Q96LB4 118 aa20■□□□□ 0.79
CDC42SE2-206ENST00000503291 OSGEPL1Q9H4B0 414 aa20■□□□□ 0.79
CDC42SE2-206ENST00000503291 PCDHGA5Q9Y5G8 931 aa20■□□□□ 0.79
CDC42SE2-206ENST00000503291 TDRD6O60522 2096 aaKnown RBP20■□□□□ 0.79
CDC42SE2-206ENST00000503291 TSPAN12O95859 305 aa20■□□□□ 0.79
CDC42SE2-206ENST00000503291 AK4P27144 223 aaPredicted RBP20■□□□□ 0.79
CDC42SE2-206ENST00000503291 MAGOHP61326 146 aaKnown RBP20■□□□□ 0.79
CDC42SE2-206ENST00000503291 SLC18A2Q05940 514 aa20■□□□□ 0.79
CDC42SE2-206ENST00000503291 TRIM61Q5EBN2 209 aa20■□□□□ 0.79
CDC42SE2-206ENST00000503291 CENPLQ8N0S6 344 aaPredicted RBP20■□□□□ 0.79
CDC42SE2-206ENST00000503291 PLD6Q8N2A8 252 aaKnown RBP20■□□□□ 0.79
CDC42SE2-206ENST00000503291 SMC6Q96SB8 1091 aa20■□□□□ 0.79
CDC42SE2-206ENST00000503291 CAPN10Q9HC96 672 aa20■□□□□ 0.79
CDC42SE2-206ENST00000503291 FSCN3Q9NQT6 498 aa20■□□□□ 0.79
CDC42SE2-206ENST00000503291 TSR3Q9UJK0 312 aaKnown RBP20■□□□□ 0.79
CDC42SE2-206ENST00000503291 PRR19A6NJB7 356 aa19.99■□□□□ 0.79
CDC42SE2-206ENST00000503291 TOP3BO95985 862 aaKnown RBP19.99■□□□□ 0.79
CDC42SE2-206ENST00000503291 CBSLP0DN79 551 aa19.99■□□□□ 0.79
CDC42SE2-206ENST00000503291 CBSP35520 551 aa19.99■□□□□ 0.79
CDC42SE2-206ENST00000503291 MPLP40238 635 aa19.99■□□□□ 0.79
CDC42SE2-206ENST00000503291 SLC26A3P40879 764 aa19.99■□□□□ 0.79
CDC42SE2-206ENST00000503291 RGS4P49798 205 aa19.99■□□□□ 0.79
CDC42SE2-206ENST00000503291 PLOD1Q02809 727 aaPredicted RBP19.99■□□□□ 0.79
CDC42SE2-206ENST00000503291 DLG1Q12959 904 aa19.99■□□□□ 0.79
CDC42SE2-206ENST00000503291 CSHL1Q14406 222 aa19.99■□□□□ 0.79
CDC42SE2-206ENST00000503291 PRRT3Q5FWE3 981 aa19.99■□□□□ 0.79
CDC42SE2-206ENST00000503291 SLC23A3Q6PIS1 610 aa19.99■□□□□ 0.79
CDC42SE2-206ENST00000503291 GPBAR1Q8TDU6 330 aa19.99■□□□□ 0.79
CDC42SE2-206ENST00000503291 KCTD4Q8WVF5 259 aa19.99■□□□□ 0.79
CDC42SE2-206ENST00000503291 LINGO1Q96FE5 620 aa19.99■□□□□ 0.79
CDC42SE2-206ENST00000503291 UNKQ9C0B0 810 aaKnown RBP19.99■□□□□ 0.79
CDC42SE2-206ENST00000503291 SLC6A14Q9UN76 642 aa19.99■□□□□ 0.79
CDC42SE2-206ENST00000503291 RPL10P27635 214 aaKnown RBP19.98■□□□□ 0.79
CDC42SE2-206ENST00000503291 CCNFP41002 786 aa19.98■□□□□ 0.79
CDC42SE2-206ENST00000503291 HNRNPKP61978 463 aaKnown RBP eCLIP19.98■□□□□ 0.79
CDC42SE2-206ENST00000503291 ILF3Q12906 894 aaKnown RBP eCLIP19.98■□□□□ 0.799e-7■■■■■ 35.7
CDC42SE2-206ENST00000503291 GRIK2Q13002 908 aa19.98■□□□□ 0.79
CDC42SE2-206ENST00000503291 RPA4Q13156 261 aa19.98■□□□□ 0.79
CDC42SE2-206ENST00000503291 C1orf61Q13536 156 aa19.98■□□□□ 0.79
CDC42SE2-206ENST00000503291 CCDC6Q16204 474 aa19.98■□□□□ 0.79
CDC42SE2-206ENST00000503291 LAIR1Q6GTX8 287 aa19.98■□□□□ 0.79
CDC42SE2-206ENST00000503291 NRROSQ86YC3 692 aa19.98■□□□□ 0.79
CDC42SE2-206ENST00000503291 ATOH1Q92858 354 aaPredicted RBP19.98■□□□□ 0.79
CDC42SE2-206ENST00000503291 GLMNQ92990 594 aa19.98■□□□□ 0.79
CDC42SE2-206ENST00000503291 NXNL1Q96CM4 212 aa19.98■□□□□ 0.79
CDC42SE2-206ENST00000503291 PDLIM5Q96HC4 596 aaKnown RBP19.98■□□□□ 0.79
CDC42SE2-206ENST00000503291 LRRC61Q9BV99 259 aa19.98■□□□□ 0.79
CDC42SE2-206ENST00000503291 RUVBL2Q9Y230 463 aaKnown RBP19.98■□□□□ 0.79
CDC42SE2-206ENST00000503291 ACTL7BQ9Y614 415 aa19.98■□□□□ 0.79
CDC42SE2-206ENST00000503291 KLHL2O95198 593 aa19.98■□□□□ 0.79
CDC42SE2-206ENST00000503291 CELA2BP08218 269 aaPredicted RBP19.98■□□□□ 0.79
CDC42SE2-206ENST00000503291 COL6A2P12110 1019 aa19.98■□□□□ 0.79
CDC42SE2-206ENST00000503291 ENO3P13929 434 aaPredicted RBP19.98■□□□□ 0.79
CDC42SE2-206ENST00000503291 ACTR1BP42025 376 aa19.98■□□□□ 0.79
CDC42SE2-206ENST00000503291 ACTR1AP61163 376 aa19.98■□□□□ 0.79
CDC42SE2-206ENST00000503291 SLC30A9Q6PML9 568 aa19.98■□□□□ 0.79
CDC42SE2-206ENST00000503291 CYHR1Q6ZMK1 362 aa19.98■□□□□ 0.79
CDC42SE2-206ENST00000503291 PIWIL4Q7Z3Z4 852 aaKnown RBP19.98■□□□□ 0.79
CDC42SE2-206ENST00000503291 CLEC14AQ86T13 490 aa19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms