RNA–Protein interactions for RNA: ENST00000502848.5

NR1I3-216, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 914 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-216ENST00000502848 CYHR1Q6ZMK1 362 aa8.91□□□□□ -0.98
NR1I3-216ENST00000502848 RNF165Q6ZSG1 346 aa8.91□□□□□ -0.98
NR1I3-216ENST00000502848 LRRTM4Q86VH4 590 aa8.91□□□□□ -0.98
NR1I3-216ENST00000502848 HEATR4Q86WZ0 1026 aa8.91□□□□□ -0.98
NR1I3-216ENST00000502848 KLHDC8AQ8IYD2 350 aa8.91□□□□□ -0.98
NR1I3-216ENST00000502848 PNPLA1Q8N8W4 532 aa8.91□□□□□ -0.98
NR1I3-216ENST00000502848 OR2L2Q8NH16 312 aa8.91□□□□□ -0.98
NR1I3-216ENST00000502848 LKAAEAR1Q8TD35 194 aa8.91□□□□□ -0.98
NR1I3-216ENST00000502848 C10orf82Q8WW14 230 aa8.91□□□□□ -0.98
NR1I3-216ENST00000502848 ATL1Q8WXF7 558 aa8.91□□□□□ -0.98
NR1I3-216ENST00000502848 PPM1EQ8WY54 764 aa8.91□□□□□ -0.98
NR1I3-216ENST00000502848 ELMO1Q92556 727 aa8.91□□□□□ -0.98
NR1I3-216ENST00000502848 SCARF2Q96GP6 870 aaPredicted RBP8.91□□□□□ -0.98
NR1I3-216ENST00000502848 FOPNLQ96NB1 174 aa8.91□□□□□ -0.98
NR1I3-216ENST00000502848 TMEM237Q96Q45 408 aa8.91□□□□□ -0.98
NR1I3-216ENST00000502848 TIMM29Q9BSF4 260 aa8.91□□□□□ -0.98
NR1I3-216ENST00000502848 PARVBQ9HBI1 364 aa8.91□□□□□ -0.98
NR1I3-216ENST00000502848 SARS2Q9NP81 518 aaKnown RBP8.91□□□□□ -0.98
NR1I3-216ENST00000502848 PFDN4Q9NQP4 134 aa8.91□□□□□ -0.98
NR1I3-216ENST00000502848 DNAJC28Q9NX36 388 aa8.91□□□□□ -0.98
NR1I3-216ENST00000502848 GALPQ9UBC7 116 aa8.91□□□□□ -0.98
NR1I3-216ENST00000502848 FBXL21Q9UKT6 434 aa8.91□□□□□ -0.98
NR1I3-216ENST00000502848 NDRG2Q9UN36 371 aaKnown RBP8.91□□□□□ -0.98
NR1I3-216ENST00000502848 APOBEC2Q9Y235 224 aaKnown RBP8.91□□□□□ -0.98
NR1I3-216ENST00000502848 COQ6Q9Y2Z9 468 aa8.91□□□□□ -0.98
NR1I3-216ENST00000502848 SZT2Q5T011 3432 aa8.91□□□□□ -0.98
NR1I3-216ENST00000502848 NPEPPSL1A6NEC2 478 aa8.9□□□□□ -0.98
NR1I3-216ENST00000502848 TRPC5OSA6NMA1 111 aa8.9□□□□□ -0.98
NR1I3-216ENST00000502848 IQCF5A8MTL0 148 aa8.9□□□□□ -0.98
NR1I3-216ENST00000502848 SUPT3HB4E1H0 165 aa8.9□□□□□ -0.98
NR1I3-216ENST00000502848 CACNB4O00305 520 aaPredicted RBP8.9□□□□□ -0.98
NR1I3-216ENST00000502848 CDC7O00311 574 aa8.9□□□□□ -0.98
NR1I3-216ENST00000502848 MATN2O00339 956 aa8.9□□□□□ -0.98
NR1I3-216ENST00000502848 PLK4O00444 970 aa8.9□□□□□ -0.98
NR1I3-216ENST00000502848 TNFRSF10CO14798 259 aa8.9□□□□□ -0.98
NR1I3-216ENST00000502848 HDAC3O15379 428 aa8.9□□□□□ -0.98
NR1I3-216ENST00000502848 FFAR2O15552 330 aa8.9□□□□□ -0.98
NR1I3-216ENST00000502848 PSIP1O75475 530 aaKnown RBP8.9□□□□□ -0.98
NR1I3-216ENST00000502848 SUPT3HO75486 399 aa8.9□□□□□ -0.98
NR1I3-216ENST00000502848 CATP04040 527 aaKnown RBP8.9□□□□□ -0.98
NR1I3-216ENST00000502848 RPN2P04844 631 aa8.9□□□□□ -0.98
NR1I3-216ENST00000502848 ANXA5P08758 320 aa8.9□□□□□ -0.98
NR1I3-216ENST00000502848 PCSK2P16519 638 aa8.9□□□□□ -0.98
NR1I3-216ENST00000502848 HNRNPA2B1P22626 353 aaKnown RBP8.9□□□□□ -0.98
NR1I3-216ENST00000502848 HOXA6P31267 233 aa8.9□□□□□ -0.98
NR1I3-216ENST00000502848 RPL14P50914 215 aaKnown RBP8.9□□□□□ -0.98
NR1I3-216ENST00000502848 CLCNKAP51800 687 aa8.9□□□□□ -0.98
NR1I3-216ENST00000502848 PKNOX1P55347 436 aa8.9□□□□□ -0.98
NR1I3-216ENST00000502848 PCDH1Q08174 1060 aa8.9□□□□□ -0.98
NR1I3-216ENST00000502848 LCP2Q13094 533 aa8.9□□□□□ -0.98
NR1I3-216ENST00000502848 FZD5Q13467 585 aa8.9□□□□□ -0.98
NR1I3-216ENST00000502848 IRF4Q15306 451 aa8.9□□□□□ -0.98
NR1I3-216ENST00000502848 TBCCQ15814 346 aa8.9□□□□□ -0.98
NR1I3-216ENST00000502848 KHDC1Q4VXA5 237 aaKnown RBP8.9□□□□□ -0.98
NR1I3-216ENST00000502848 ARL13AQ5H913 290 aaPredicted RBP8.9□□□□□ -0.98
NR1I3-216ENST00000502848 SH2D4BQ5SQS7 431 aa8.9□□□□□ -0.98
NR1I3-216ENST00000502848 METTL21CQ5VZV1 264 aa8.9□□□□□ -0.98
NR1I3-216ENST00000502848 CES4AQ5XG92 561 aa8.9□□□□□ -0.98
NR1I3-216ENST00000502848 SEL1L3Q68CR1 1132 aa8.9□□□□□ -0.98
NR1I3-216ENST00000502848 ANKS6Q68DC2 871 aa8.9□□□□□ -0.98
NR1I3-216ENST00000502848 TMEM220Q6QAJ8 160 aa8.9□□□□□ -0.98
NR1I3-216ENST00000502848 UNC5DQ6UXZ4 953 aa8.9□□□□□ -0.98
NR1I3-216ENST00000502848 NAPRTQ6XQN6 538 aa8.9□□□□□ -0.98
NR1I3-216ENST00000502848 ZCCHC23Q6ZST2 131 aa8.9□□□□□ -0.98
NR1I3-216ENST00000502848 SPATA6LQ8N4H0 392 aa8.9□□□□□ -0.98
NR1I3-216ENST00000502848 PTGR2Q8N8N7 351 aaPredicted RBP8.9□□□□□ -0.98
NR1I3-216ENST00000502848 TSTD1Q8NFU3 115 aa8.9□□□□□ -0.98
NR1I3-216ENST00000502848 MAGEC3Q8TD91 643 aa8.9□□□□□ -0.98
NR1I3-216ENST00000502848 MCOLN3Q8TDD5 553 aa8.9□□□□□ -0.98
NR1I3-216ENST00000502848 ZNF483Q8TF39 744 aaPredicted RBP8.9□□□□□ -0.98
NR1I3-216ENST00000502848 SGF29Q96ES7 293 aa8.9□□□□□ -0.98
NR1I3-216ENST00000502848 CCDC97Q96F63 343 aaPredicted RBP8.9□□□□□ -0.98
NR1I3-216ENST00000502848 NUSAP1Q9BXS6 441 aaKnown RBP8.9□□□□□ -0.98
NR1I3-216ENST00000502848 GSTO2Q9H4Y5 243 aa8.9□□□□□ -0.98
NR1I3-216ENST00000502848 LMAN1LQ9HAT1 526 aa8.9□□□□□ -0.98
NR1I3-216ENST00000502848 ATXN10Q9UBB4 475 aa8.9□□□□□ -0.98
NR1I3-216ENST00000502848 EBF1Q9UH73 591 aa8.9□□□□□ -0.98
NR1I3-216ENST00000502848 PTBP2Q9UKA9 531 aaKnown RBP8.9□□□□□ -0.98
NR1I3-216ENST00000502848 SLC17A4Q9Y2C5 497 aa8.9□□□□□ -0.98
NR1I3-216ENST00000502848 HS3ST3A1Q9Y663 406 aa8.9□□□□□ -0.98
NR1I3-216ENST00000502848 F5P12259 2224 aa8.89□□□□□ -0.99
NR1I3-216ENST00000502848 TBC1D3DA0A087WVF3 549 aa8.89□□□□□ -0.99
NR1I3-216ENST00000502848 TBC1D3IA0A087WXS9 549 aa8.89□□□□□ -0.99
NR1I3-216ENST00000502848 TBC1D3EA0A087X179 549 aa8.89□□□□□ -0.99
NR1I3-216ENST00000502848 TBC1D3KA0A087X1G2 549 aa8.89□□□□□ -0.99
NR1I3-216ENST00000502848 CCDC163A0A0D9SF12 145 aa8.89□□□□□ -0.99
NR1I3-216ENST00000502848 KRBA1A5PL33 1030 aa8.89□□□□□ -0.99
NR1I3-216ENST00000502848 TBC1D3FA6NER0 549 aaPredicted RBP8.89□□□□□ -0.99
NR1I3-216ENST00000502848 ANTXRLA6NF34 631 aa8.89□□□□□ -0.99
NR1I3-216ENST00000502848 TBC1D3LB9A6J9 549 aa8.89□□□□□ -0.99
NR1I3-216ENST00000502848 PRAMEF26H0Y7S4 382 aa8.89□□□□□ -0.99
NR1I3-216ENST00000502848 K7ESM1 405 aa8.89□□□□□ -0.99
NR1I3-216ENST00000502848 UBXN8O00124 270 aa8.89□□□□□ -0.99
NR1I3-216ENST00000502848 FPGTO14772 594 aa8.89□□□□□ -0.99
NR1I3-216ENST00000502848 SLC22A2O15244 555 aa8.89□□□□□ -0.99
NR1I3-216ENST00000502848 INPP4BO15327 924 aa8.89□□□□□ -0.99
NR1I3-216ENST00000502848 HNRNPCL1O60812 293 aaKnown RBP8.89□□□□□ -0.99
NR1I3-216ENST00000502848 KATNA1O75449 491 aa8.89□□□□□ -0.99
NR1I3-216ENST00000502848 APBB3O95704 486 aa8.89□□□□□ -0.99
NR1I3-216ENST00000502848 SEMA4FO95754 770 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms