RNA–Protein interactions for RNA: ENST00000498495.1

HSPG2-213, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 488 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-213ENST00000498495 LILRA3Q8N6C8 439 aaPredicted RBP12.52□□□□□ -0.41
HSPG2-213ENST00000498495 OTUD6BQ8N6M0 293 aa12.52□□□□□ -0.41
HSPG2-213ENST00000498495 NAT8LQ8N9F0 302 aa12.52□□□□□ -0.41
HSPG2-213ENST00000498495 AGBL5Q8NDL9 886 aa12.52□□□□□ -0.41
HSPG2-213ENST00000498495 ZNF248Q8NDW4 579 aa12.52□□□□□ -0.41
HSPG2-213ENST00000498495 SPDYE1Q8NFV5 336 aaPredicted RBP12.52□□□□□ -0.41
HSPG2-213ENST00000498495 SNIP1Q8TAD8 396 aaKnown RBP12.52□□□□□ -0.41
HSPG2-213ENST00000498495 ZFPM2Q8WW38 1151 aa12.52□□□□□ -0.41
HSPG2-213ENST00000498495 RUNDC3BQ96NL0 473 aa12.52□□□□□ -0.41
HSPG2-213ENST00000498495 ASCL3Q9NQ33 180 aa12.52□□□□□ -0.41
HSPG2-213ENST00000498495 PDP2Q9P2J9 529 aa12.52□□□□□ -0.41
HSPG2-213ENST00000498495 KLHL3Q9UH77 587 aa12.52□□□□□ -0.41
HSPG2-213ENST00000498495 ASIC3Q9UHC3 531 aa12.52□□□□□ -0.41
HSPG2-213ENST00000498495 CDRT15L2A8MXV6 281 aa12.51□□□□□ -0.41
HSPG2-213ENST00000498495 LIN7AO14910 233 aaPredicted RBP12.51□□□□□ -0.41
HSPG2-213ENST00000498495 OR1I1O60431 355 aa12.51□□□□□ -0.41
HSPG2-213ENST00000498495 NDUFS3O75489 264 aa12.51□□□□□ -0.41
HSPG2-213ENST00000498495 TMEM63AO94886 807 aa12.51□□□□□ -0.41
HSPG2-213ENST00000498495 VAPBO95292 243 aa12.51□□□□□ -0.41
HSPG2-213ENST00000498495 ITIH1P19827 911 aa12.51□□□□□ -0.41
HSPG2-213ENST00000498495 PTGIRP43119 386 aa12.51□□□□□ -0.41
HSPG2-213ENST00000498495 CD151P48509 253 aa12.51□□□□□ -0.41
HSPG2-213ENST00000498495 PCBP4P57723 403 aaKnown RBP12.51□□□□□ -0.41
HSPG2-213ENST00000498495 RPA4Q13156 261 aa12.51□□□□□ -0.41
HSPG2-213ENST00000498495 SEMA3AQ14563 771 aa12.51□□□□□ -0.41
HSPG2-213ENST00000498495 PLCL1Q15111 1095 aa12.51□□□□□ -0.41
HSPG2-213ENST00000498495 TMEM164Q5U3C3 297 aa12.51□□□□□ -0.41
HSPG2-213ENST00000498495 KLHL35Q6PF15 583 aa12.51□□□□□ -0.41
HSPG2-213ENST00000498495 C17orf53Q8N3J3 647 aaPredicted RBP12.51□□□□□ -0.41
HSPG2-213ENST00000498495 MPP5Q8N3R9 675 aa12.51□□□□□ -0.41
HSPG2-213ENST00000498495 GPR150Q8NGU9 434 aa12.51□□□□□ -0.41
HSPG2-213ENST00000498495 HNRNPLLQ8WVV9 542 aaKnown RBP12.51□□□□□ -0.41
HSPG2-213ENST00000498495 ELMO1Q92556 727 aa12.51□□□□□ -0.41
HSPG2-213ENST00000498495 SLCO2A1Q92959 643 aa12.51□□□□□ -0.41
HSPG2-213ENST00000498495 SERPINB12Q96P63 405 aa12.51□□□□□ -0.41
HSPG2-213ENST00000498495 FERD3LQ96RJ6 166 aa12.51□□□□□ -0.41
HSPG2-213ENST00000498495 TSSK1BQ9BXA7 367 aa12.51□□□□□ -0.41
HSPG2-213ENST00000498495 HEBP2Q9Y5Z4 205 aa12.51□□□□□ -0.41
HSPG2-213ENST00000498495 TPRP12270 2363 aaKnown RBP12.51□□□□□ -0.41
HSPG2-213ENST00000498495 A0A087WV48 116 aa12.5□□□□□ -0.41
HSPG2-213ENST00000498495 FAM237BA0A1B0GVD1 139 aa12.5□□□□□ -0.41
HSPG2-213ENST00000498495 DNALI1O14645 258 aaPredicted RBP12.5□□□□□ -0.41
HSPG2-213ENST00000498495 PRMT5O14744 637 aaPredicted RBP12.5□□□□□ -0.41
HSPG2-213ENST00000498495 PFDN6O15212 129 aa12.5□□□□□ -0.41
HSPG2-213ENST00000498495 CAPN5O15484 640 aaPredicted RBP12.5□□□□□ -0.41
HSPG2-213ENST00000498495 CCL4P13236 92 aa12.5□□□□□ -0.41
HSPG2-213ENST00000498495 NDUFS1P28331 727 aa12.5□□□□□ -0.41
HSPG2-213ENST00000498495 PDHA2P29803 388 aa12.5□□□□□ -0.41
HSPG2-213ENST00000498495 SLC5A2P31639 672 aa12.5□□□□□ -0.41
HSPG2-213ENST00000498495 ETV5P41161 510 aa12.5□□□□□ -0.41
HSPG2-213ENST00000498495 ETF1P62495 437 aaKnown RBP12.5□□□□□ -0.41
HSPG2-213ENST00000498495 DR1Q01658 176 aa12.5□□□□□ -0.41
HSPG2-213ENST00000498495 PLOD1Q02809 727 aaPredicted RBP12.5□□□□□ -0.41
HSPG2-213ENST00000498495 PTK6Q13882 451 aa12.5□□□□□ -0.41
HSPG2-213ENST00000498495 DHX34Q14147 1143 aaKnown RBP12.5□□□□□ -0.41
HSPG2-213ENST00000498495 BRD3Q15059 726 aa12.5□□□□□ -0.41
HSPG2-213ENST00000498495 RNASEH2BQ5TBB1 312 aaKnown RBP12.5□□□□□ -0.41
HSPG2-213ENST00000498495 MRNIPQ6NTE8 343 aa12.5□□□□□ -0.41
HSPG2-213ENST00000498495 XKR5Q6UX68 686 aa12.5□□□□□ -0.41
HSPG2-213ENST00000498495 SYDE1Q6ZW31 735 aaPredicted RBP12.5□□□□□ -0.41
HSPG2-213ENST00000498495 ARHGAP22Q7Z5H3 698 aa12.5□□□□□ -0.41
HSPG2-213ENST00000498495 CLEC14AQ86T13 490 aa12.5□□□□□ -0.41
HSPG2-213ENST00000498495 JPH3Q8WXH2 748 aaPredicted RBP12.5□□□□□ -0.41
HSPG2-213ENST00000498495 USP7Q93009 1102 aa12.5□□□□□ -0.41
HSPG2-213ENST00000498495 ZDHHC12Q96GR4 267 aa12.5□□□□□ -0.41
HSPG2-213ENST00000498495 NAF1Q96HR8 494 aaKnown RBP12.5□□□□□ -0.41
HSPG2-213ENST00000498495 RMDN2Q96LZ7 410 aa12.5□□□□□ -0.41
HSPG2-213ENST00000498495 TGM7Q96PF1 710 aa12.5□□□□□ -0.41
HSPG2-213ENST00000498495 CARD6Q9BX69 1037 aa12.5□□□□□ -0.41
HSPG2-213ENST00000498495 OR52A5Q9H2C5 316 aa12.5□□□□□ -0.41
HSPG2-213ENST00000498495 OGFRQ9NZT2 677 aa12.5□□□□□ -0.41
HSPG2-213ENST00000498495 MARCH4Q9P2E8 410 aaPredicted RBP12.5□□□□□ -0.41
HSPG2-213ENST00000498495 PCDHGA7Q9Y5G6 932 aa12.5□□□□□ -0.41
HSPG2-213ENST00000498495 MAD1L1Q9Y6D9 718 aa12.5□□□□□ -0.41
HSPG2-213ENST00000498495 RPS6KL1Q9Y6S9 549 aa12.5□□□□□ -0.41
HSPG2-213ENST00000498495 ACACBO00763 2458 aa12.5□□□□□ -0.41
HSPG2-213ENST00000498495 EFCAB7A8K855 629 aa12.49□□□□□ -0.41
HSPG2-213ENST00000498495 GOLGA8KD6RF30 607 aa12.49□□□□□ -0.41
HSPG2-213ENST00000498495 GOLGA8TH3BQL2 631 aa12.49□□□□□ -0.41
HSPG2-213ENST00000498495 NVLO15381 856 aaKnown RBP12.49□□□□□ -0.41
HSPG2-213ENST00000498495 C9P02748 559 aa12.49□□□□□ -0.41
HSPG2-213ENST00000498495 FGF3P11487 239 aaPredicted RBP12.49□□□□□ -0.41
HSPG2-213ENST00000498495 ITGB6P18564 788 aa12.49□□□□□ -0.41
HSPG2-213ENST00000498495 PREPP48147 710 aa12.49□□□□□ -0.41
HSPG2-213ENST00000498495 GFERP55789 205 aa12.49□□□□□ -0.41
HSPG2-213ENST00000498495 BOP1Q14137 746 aaKnown RBP12.49□□□□□ -0.41
HSPG2-213ENST00000498495 ANKRD20A4Q4UJ75 823 aa12.49□□□□□ -0.41
HSPG2-213ENST00000498495 ZNF658BQ4V348 819 aaPredicted RBP12.49□□□□□ -0.41
HSPG2-213ENST00000498495 SYTL3Q4VX76 610 aa12.49□□□□□ -0.41
HSPG2-213ENST00000498495 IZUMO3Q5VZ72 239 aa12.49□□□□□ -0.41
HSPG2-213ENST00000498495 PTRHD1Q6GMV3 140 aaKnown RBP12.49□□□□□ -0.41
HSPG2-213ENST00000498495 KIAA0930Q6ICG6 404 aaPredicted RBP12.49□□□□□ -0.41
HSPG2-213ENST00000498495 IRGCQ6NXR0 463 aa12.49□□□□□ -0.41
HSPG2-213ENST00000498495 DUS1LQ6P1R4 473 aaKnown RBP12.49□□□□□ -0.41
HSPG2-213ENST00000498495 C19orf48Q6RUI8 117 aa12.49□□□□□ -0.41
HSPG2-213ENST00000498495 NAPRTQ6XQN6 538 aa12.49□□□□□ -0.41
HSPG2-213ENST00000498495 SYT10Q6XYQ8 523 aa12.49□□□□□ -0.41
HSPG2-213ENST00000498495 TMEM135Q86UB9 458 aa12.49□□□□□ -0.41
HSPG2-213ENST00000498495 FAM129CQ86XR2 697 aa12.49□□□□□ -0.41
HSPG2-213ENST00000498495 PHC3Q8NDX5 983 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 810.6 ms