RNA–Protein interactions for RNA: ENST00000498280.1

RBM39-242, Transcript of RNA binding motif protein 39, humanhuman

TSL 3

Gene RBM39, Length 444 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-242ENST00000498280 MAGEC3Q8TD91 643 aa2.3□□□□□ -2.04
RBM39-242ENST00000498280 TMCO6Q96DC7 493 aa2.3□□□□□ -2.04
RBM39-242ENST00000498280 ERP27Q96DN0 273 aa2.3□□□□□ -2.04
RBM39-242ENST00000498280 CCDC34Q96HJ3 373 aa2.3□□□□□ -2.04
RBM39-242ENST00000498280 SERINC2Q96SA4 455 aa2.3□□□□□ -2.04
RBM39-242ENST00000498280 CDRT15Q96T59 188 aa2.3□□□□□ -2.04
RBM39-242ENST00000498280 APOL6Q9BWW8 343 aa2.3□□□□□ -2.04
RBM39-242ENST00000498280 RTN4RQ9BZR6 473 aa2.3□□□□□ -2.04
RBM39-242ENST00000498280 SEMA6AQ9H2E6 1030 aa2.3□□□□□ -2.04
RBM39-242ENST00000498280 PPIL3Q9H2H8 161 aaKnown RBP2.3□□□□□ -2.04
RBM39-242ENST00000498280 OSGEPL1Q9H4B0 414 aa2.3□□□□□ -2.04
RBM39-242ENST00000498280 TMEM30AQ9NV96 361 aa2.3□□□□□ -2.04
RBM39-242ENST00000498280 TRMT1Q9NXH9 659 aaKnown RBP2.3□□□□□ -2.04
RBM39-242ENST00000498280 TAAR2Q9P1P5 351 aa2.3□□□□□ -2.04
RBM39-242ENST00000498280 CPSF2Q9P2I0 782 aaKnown RBP2.3□□□□□ -2.04
RBM39-242ENST00000498280 POLG2Q9UHN1 485 aa2.3□□□□□ -2.04
RBM39-242ENST00000498280 HACL1Q9UJ83 578 aa2.3□□□□□ -2.04
RBM39-242ENST00000498280 RALYQ9UKM9 306 aaKnown RBP2.3□□□□□ -2.04
RBM39-242ENST00000498280 ZNF148Q9UQR1 794 aa2.3□□□□□ -2.04
RBM39-242ENST00000498280 TTLL3Q9Y4R7 772 aa2.3□□□□□ -2.04
RBM39-242ENST00000498280 TMEM184BQ9Y519 407 aaPredicted RBP2.3□□□□□ -2.04
RBM39-242ENST00000498280 FAM169AQ9Y6X4 670 aa2.3□□□□□ -2.04
RBM39-242ENST00000498280 PASKQ96RG2 1323 aa2.3□□□□□ -2.04
RBM39-242ENST00000498280 PRAG1Q86YV5 1406 aa2.29□□□□□ -2.04
RBM39-242ENST00000498280 GPR75-ASB3A0A0A6YYF3 556 aa2.29□□□□□ -2.04
RBM39-242ENST00000498280 LILRA5A6NI73 299 aa2.29□□□□□ -2.04
RBM39-242ENST00000498280 ZBTB43O43298 467 aa2.29□□□□□ -2.04
RBM39-242ENST00000498280 ZNF500O60304 480 aaPredicted RBP2.29□□□□□ -2.04
RBM39-242ENST00000498280 CREG1O75629 220 aa2.29□□□□□ -2.04
RBM39-242ENST00000498280 WISP2O76076 250 aa2.29□□□□□ -2.04
RBM39-242ENST00000498280 DNTTP04053 509 aa2.29□□□□□ -2.04
RBM39-242ENST00000498280 CDH1P12830 882 aa2.29□□□□□ -2.04
RBM39-242ENST00000498280 GNL1P36915 607 aaPredicted RBP2.29□□□□□ -2.04
RBM39-242ENST00000498280 AMPHP49418 695 aa2.29□□□□□ -2.04
RBM39-242ENST00000498280 KRT33BQ14525 404 aa2.29□□□□□ -2.04
RBM39-242ENST00000498280 RAB6CQ53S08 254 aa2.29□□□□□ -2.04
RBM39-242ENST00000498280 STXBP5Q5T5C0 1151 aa2.29□□□□□ -2.04
RBM39-242ENST00000498280 ZDHHC20Q5W0Z9 365 aa2.29□□□□□ -2.04
RBM39-242ENST00000498280 ALS2CLQ60I27 953 aa2.29□□□□□ -2.04
RBM39-242ENST00000498280 GPR139Q6DWJ6 353 aa2.29□□□□□ -2.04
RBM39-242ENST00000498280 NAA16Q6N069 864 aaPredicted RBP2.29□□□□□ -2.04
RBM39-242ENST00000498280 ARHGAP11AQ6P4F7 1023 aa2.29□□□□□ -2.04
RBM39-242ENST00000498280 TEX38Q6PEX7 206 aa2.29□□□□□ -2.04
RBM39-242ENST00000498280 DENND5BQ6ZUT9 1274 aa2.29□□□□□ -2.04
RBM39-242ENST00000498280 ASB18Q6ZVZ8 466 aa2.29□□□□□ -2.04
RBM39-242ENST00000498280 Q75L30 129 aa2.29□□□□□ -2.04
RBM39-242ENST00000498280 INTS8Q75QN2 995 aaKnown RBP2.29□□□□□ -2.04
RBM39-242ENST00000498280 ZNF534Q76KX8 674 aa2.29□□□□□ -2.04
RBM39-242ENST00000498280 HAUS6Q7Z4H7 955 aa2.29□□□□□ -2.04
RBM39-242ENST00000498280 LDB1Q86U70 411 aaPredicted RBP2.29□□□□□ -2.04
RBM39-242ENST00000498280 PRPF39Q86UA1 669 aaKnown RBP2.29□□□□□ -2.04
RBM39-242ENST00000498280 SPAG16Q8N0X2 631 aa2.29□□□□□ -2.04
RBM39-242ENST00000498280 MINDY1Q8N5J2 469 aa2.29□□□□□ -2.04
RBM39-242ENST00000498280 SLC5A8Q8N695 610 aa2.29□□□□□ -2.04
RBM39-242ENST00000498280 GCSAMQ8N6F7 178 aa2.29□□□□□ -2.04
RBM39-242ENST00000498280 KCTD6Q8NC69 237 aa2.29□□□□□ -2.04
RBM39-242ENST00000498280 MAPK1IP1LQ8NDC0 245 aa2.29□□□□□ -2.04
RBM39-242ENST00000498280 OR52I2Q8NH67 350 aa2.29□□□□□ -2.04
RBM39-242ENST00000498280 TBC1D16Q8TBP0 767 aa2.29□□□□□ -2.04
RBM39-242ENST00000498280 PTPMT1Q8WUK0 201 aaPredicted RBP2.29□□□□□ -2.04
RBM39-242ENST00000498280 ZFAND2BQ8WV99 257 aa2.29□□□□□ -2.04
RBM39-242ENST00000498280 DNAAF4Q8WXU2 420 aa2.29□□□□□ -2.04
RBM39-242ENST00000498280 ZNF622Q969S3 477 aaKnown RBP eCLIP2.29□□□□□ -2.04
RBM39-242ENST00000498280 DACH2Q96NX9 599 aa2.29□□□□□ -2.04
RBM39-242ENST00000498280 PYGO2Q9BRQ0 406 aa2.29□□□□□ -2.04
RBM39-242ENST00000498280 SYT17Q9BSW7 474 aa2.29□□□□□ -2.04
RBM39-242ENST00000498280 DCTN5Q9BTE1 182 aa2.29□□□□□ -2.04
RBM39-242ENST00000498280 RAB6CQ9H0N0 254 aa2.29□□□□□ -2.04
RBM39-242ENST00000498280 LRMDAQ9H2I8 198 aa2.29□□□□□ -2.04
RBM39-242ENST00000498280 CHMP1AQ9HD42 196 aaPredicted RBP2.29□□□□□ -2.04
RBM39-242ENST00000498280 MBNL1Q9NR56 388 aaKnown RBP2.29□□□□□ -2.04
RBM39-242ENST00000498280 PSD3Q9NYI0 1048 aa2.29□□□□□ -2.04
RBM39-242ENST00000498280 RCC2Q9P258 522 aaKnown RBP2.29□□□□□ -2.04
RBM39-242ENST00000498280 LARSQ9P2J5 1176 aaKnown RBP2.29□□□□□ -2.04
RBM39-242ENST00000498280 VDAC3Q9Y277 283 aa2.29□□□□□ -2.04
RBM39-242ENST00000498280 CACNA1FO60840 1977 aa2.29□□□□□ -2.04
RBM39-242ENST00000498280 TAF1P21675 1872 aa2.28□□□□□ -2.04
RBM39-242ENST00000498280 ZNF644Q9H582 1327 aaPredicted RBP2.28□□□□□ -2.04
RBM39-242ENST00000498280 hCG_1809904A0A1W2PP81 198 aa2.28□□□□□ -2.04
RBM39-242ENST00000498280 A0A1W2PPE2 198 aa2.28□□□□□ -2.04
RBM39-242ENST00000498280 A0A1W2PR64 198 aa2.28□□□□□ -2.04
RBM39-242ENST00000498280 OR2M5A3KFT3 312 aa2.28□□□□□ -2.04
RBM39-242ENST00000498280 OR5K3A6NET4 321 aa2.28□□□□□ -2.04
RBM39-242ENST00000498280 A6NL46 340 aa2.28□□□□□ -2.04
RBM39-242ENST00000498280 MAGEB17A8MXT2 336 aa2.28□□□□□ -2.04
RBM39-242ENST00000498280 EIF3DO15371 548 aaKnown RBP eCLIP2.28□□□□□ -2.04
RBM39-242ENST00000498280 NDUFS4O43181 175 aa2.28□□□□□ -2.04
RBM39-242ENST00000498280 PLOD3O60568 738 aa2.28□□□□□ -2.04
RBM39-242ENST00000498280 WDR1O75083 606 aa2.28□□□□□ -2.04
RBM39-242ENST00000498280 PSMD10O75832 226 aa2.28□□□□□ -2.04
RBM39-242ENST00000498280 HSP90AA1P07900 732 aaKnown RBP2.28□□□□□ -2.04
RBM39-242ENST00000498280 POLR2CP19387 275 aaPredicted RBP2.28□□□□□ -2.04
RBM39-242ENST00000498280 DNASE1P24855 282 aa2.28□□□□□ -2.04
RBM39-242ENST00000498280 USP8P40818 1118 aa2.28□□□□□ -2.04
RBM39-242ENST00000498280 PPP5CP53041 499 aa2.28□□□□□ -2.04
RBM39-242ENST00000498280 CTSCP53634 463 aa2.28□□□□□ -2.04
RBM39-242ENST00000498280 UBXN2AP68543 259 aa2.28□□□□□ -2.04
RBM39-242ENST00000498280 PLIN5Q00G26 463 aa2.28□□□□□ -2.04
RBM39-242ENST00000498280 GTF2H2Q13888 395 aa2.28□□□□□ -2.04
RBM39-242ENST00000498280 BAATQ14032 418 aaPredicted RBP2.28□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms