RNA–Protein interactions for RNA: ENST00000497580.5

GAPVD1-220, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 3,720 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-220ENST00000497580 DNMT3LQ9UJW3 386 aa12.89□□□□□ -0.35
GAPVD1-220ENST00000497580 OSGIN1Q9UJX0 560 aa12.89□□□□□ -0.35
GAPVD1-220ENST00000497580 STAP1Q9ULZ2 295 aa12.89□□□□□ -0.35
GAPVD1-220ENST00000497580 MAFBQ9Y5Q3 323 aaPredicted RBP12.89□□□□□ -0.35
GAPVD1-220ENST00000497580 DOCK5Q9H7D0 1870 aa12.89□□□□□ -0.35
GAPVD1-220ENST00000497580 THSD7AQ9UPZ6 1657 aa12.89□□□□□ -0.35
GAPVD1-220ENST00000497580 CTDSP2O14595 271 aa12.89□□□□□ -0.35
GAPVD1-220ENST00000497580 TULP3O75386 442 aa12.89□□□□□ -0.35
GAPVD1-220ENST00000497580 MYL3P08590 195 aa12.89□□□□□ -0.35
GAPVD1-220ENST00000497580 ATF4P18848 351 aaPredicted RBP12.89□□□□□ -0.35
GAPVD1-220ENST00000497580 PRDX3P30048 256 aaKnown RBP12.89□□□□□ -0.35
GAPVD1-220ENST00000497580 KRR1Q13601 381 aaKnown RBP12.89□□□□□ -0.35
GAPVD1-220ENST00000497580 KCTD11Q693B1 232 aa12.89□□□□□ -0.35
GAPVD1-220ENST00000497580 PNCKQ6P2M8 343 aa12.89□□□□□ -0.35
GAPVD1-220ENST00000497580 PTRH1Q86Y79 214 aaKnown RBP12.89□□□□□ -0.35
GAPVD1-220ENST00000497580 GTF2H4Q92759 462 aa12.89□□□□□ -0.35
GAPVD1-220ENST00000497580 NARFLQ9H6Q4 476 aa12.89□□□□□ -0.35
GAPVD1-220ENST00000497580 A0A0X1KG70 313 aa12.89□□□□□ -0.35
GAPVD1-220ENST00000497580 HTR1EP28566 365 aa12.89□□□□□ -0.35
GAPVD1-220ENST00000497580 RRM2P31350 389 aa12.89□□□□□ -0.35
GAPVD1-220ENST00000497580 MATKP42679 507 aa12.89□□□□□ -0.35
GAPVD1-220ENST00000497580 POU6F2P78424 691 aaPredicted RBP12.89□□□□□ -0.35
GAPVD1-220ENST00000497580 PRSS36Q5K4E3 855 aa12.89□□□□□ -0.35
GAPVD1-220ENST00000497580 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.89□□□□□ -0.35
GAPVD1-220ENST00000497580 UBQLNLQ8IYU4 475 aa12.89□□□□□ -0.35
GAPVD1-220ENST00000497580 FAM109AQ8N4B1 249 aa12.89□□□□□ -0.35
GAPVD1-220ENST00000497580 TMEM199Q8N511 208 aa12.89□□□□□ -0.35
GAPVD1-220ENST00000497580 COPS5Q92905 334 aa12.89□□□□□ -0.35
GAPVD1-220ENST00000497580 CDCA5Q96FF9 252 aa12.89□□□□□ -0.35
GAPVD1-220ENST00000497580 BARD1Q99728 777 aaKnown RBP12.89□□□□□ -0.35
GAPVD1-220ENST00000497580 DHRS9Q9BPW9 319 aa12.89□□□□□ -0.35
GAPVD1-220ENST00000497580 MCMBPQ9BTE3 642 aa12.89□□□□□ -0.35
GAPVD1-220ENST00000497580 DEFB129Q9H1M3 183 aa12.89□□□□□ -0.35
GAPVD1-220ENST00000497580 MUC13Q9H3R2 512 aa12.89□□□□□ -0.35
GAPVD1-220ENST00000497580 KIF17Q9P2E2 1029 aa12.89□□□□□ -0.35
GAPVD1-220ENST00000497580 DNMT3AQ9Y6K1 912 aaPredicted RBP12.89□□□□□ -0.35
GAPVD1-220ENST00000497580 A0A096LPI6 279 aa12.88□□□□□ -0.35
GAPVD1-220ENST00000497580 PABPN1LA6NDY0 278 aaKnown RBP12.88□□□□□ -0.35
GAPVD1-220ENST00000497580 ACKR2O00590 384 aa12.88□□□□□ -0.35
GAPVD1-220ENST00000497580 GAS2O43903 313 aaKnown RBP12.88□□□□□ -0.35
GAPVD1-220ENST00000497580 SEMA3DO95025 777 aa12.88□□□□□ -0.35
GAPVD1-220ENST00000497580 YES1P07947 543 aa12.88□□□□□ -0.35
GAPVD1-220ENST00000497580 C21orf33P30042 268 aaPredicted RBP12.88□□□□□ -0.35
GAPVD1-220ENST00000497580 DCTP40126 519 aa12.88□□□□□ -0.35
GAPVD1-220ENST00000497580 TMEM132BQ14DG7 1078 aa12.88□□□□□ -0.35
GAPVD1-220ENST00000497580 CDONQ4KMG0 1287 aa12.88□□□□□ -0.35
GAPVD1-220ENST00000497580 HFE2Q6ZVN8 426 aa12.88□□□□□ -0.35
GAPVD1-220ENST00000497580 RASSF5Q8WWW0 418 aa12.88□□□□□ -0.35
GAPVD1-220ENST00000497580 RMDN1Q96DB5 314 aa12.88□□□□□ -0.35
GAPVD1-220ENST00000497580 SLC7A5P2Q9GIP4 190 aa12.88□□□□□ -0.35
GAPVD1-220ENST00000497580 OR51E2Q9H255 320 aa12.88□□□□□ -0.35
GAPVD1-220ENST00000497580 RNF6Q9Y252 685 aa12.88□□□□□ -0.35
GAPVD1-220ENST00000497580 E5RI56 91 aa12.88□□□□□ -0.35
GAPVD1-220ENST00000497580 ARHGEF9O43307 516 aa12.88□□□□□ -0.35
GAPVD1-220ENST00000497580 DFNA5O60443 496 aa12.88□□□□□ -0.35
GAPVD1-220ENST00000497580 ZNF682O95780 498 aa12.88□□□□□ -0.35
GAPVD1-220ENST00000497580 EPHA2P29317 976 aa12.88□□□□□ -0.35
GAPVD1-220ENST00000497580 IL12RB1P42701 662 aa12.88□□□□□ -0.35
GAPVD1-220ENST00000497580 NUDT6P53370 316 aa12.88□□□□□ -0.35
GAPVD1-220ENST00000497580 CDKN2DP55273 166 aa12.88□□□□□ -0.35
GAPVD1-220ENST00000497580 HERVK_113P63132 956 aa12.88□□□□□ -0.35
GAPVD1-220ENST00000497580 CRY1Q16526 586 aa12.88□□□□□ -0.35
GAPVD1-220ENST00000497580 GCNT7Q6ZNI0 430 aa12.88□□□□□ -0.35
GAPVD1-220ENST00000497580 GET4Q7L5D6 327 aaPredicted RBP12.88□□□□□ -0.35
GAPVD1-220ENST00000497580 MILR1Q7Z6M3 343 aa12.88□□□□□ -0.35
GAPVD1-220ENST00000497580 NOXA1Q86UR1 476 aa12.88□□□□□ -0.35
GAPVD1-220ENST00000497580 P3H2Q8IVL5 708 aa12.88□□□□□ -0.35
GAPVD1-220ENST00000497580 SIMC1Q8NDZ2 872 aa12.88□□□□□ -0.35
GAPVD1-220ENST00000497580 ERVK-6Q9BXR3 956 aa12.88□□□□□ -0.35
GAPVD1-220ENST00000497580 SIPA1L1O43166 1804 aa12.88□□□□□ -0.35
GAPVD1-220ENST00000497580 A0A0G2JMP0 313 aa12.88□□□□□ -0.35
GAPVD1-220ENST00000497580 SNTNA6NMZ2 147 aa12.88□□□□□ -0.35
GAPVD1-220ENST00000497580 ARVCFO00192 962 aa12.88□□□□□ -0.35
GAPVD1-220ENST00000497580 CLDN5O00501 218 aa12.88□□□□□ -0.35
GAPVD1-220ENST00000497580 CYP2A7P20853 494 aa12.88□□□□□ -0.35
GAPVD1-220ENST00000497580 FOXM1Q08050 763 aa12.88□□□□□ -0.35
GAPVD1-220ENST00000497580 SLC10A6Q3KNW5 377 aa12.88□□□□□ -0.35
GAPVD1-220ENST00000497580 PLEKHG6Q3KR16 790 aa12.88□□□□□ -0.35
GAPVD1-220ENST00000497580 IER5Q5VY09 327 aa12.88□□□□□ -0.35
GAPVD1-220ENST00000497580 ADHFE1Q8IWW8 467 aa12.88□□□□□ -0.35
GAPVD1-220ENST00000497580 TRMOQ9BU70 441 aa12.88□□□□□ -0.35
GAPVD1-220ENST00000497580 TIGARQ9NQ88 270 aa12.88□□□□□ -0.35
GAPVD1-220ENST00000497580 FNDC3AQ9Y2H6 1198 aaKnown RBP12.88□□□□□ -0.35
GAPVD1-220ENST00000497580 GPR45Q9Y5Y3 372 aa12.88□□□□□ -0.35
GAPVD1-220ENST00000497580 CNTNAP1P78357 1384 aa12.87□□□□□ -0.35
GAPVD1-220ENST00000497580 A8MX80 341 aa12.87□□□□□ -0.35
GAPVD1-220ENST00000497580 PLA2G6O60733 806 aa12.87□□□□□ -0.35
GAPVD1-220ENST00000497580 DNAJB5O75953 348 aa12.87□□□□□ -0.35
GAPVD1-220ENST00000497580 VTNP04004 478 aa12.87□□□□□ -0.35
GAPVD1-220ENST00000497580 CTSKP43235 329 aa12.87□□□□□ -0.35
GAPVD1-220ENST00000497580 TIGD6Q17RP2 521 aa12.87□□□□□ -0.35
GAPVD1-220ENST00000497580 TMEM207Q6UWW9 146 aa12.87□□□□□ -0.35
GAPVD1-220ENST00000497580 PHACTR4Q8IZ21 702 aa12.87□□□□□ -0.35
GAPVD1-220ENST00000497580 CDYL2Q8N8U2 506 aa12.87□□□□□ -0.35
GAPVD1-220ENST00000497580 TEKT5Q96M29 485 aa12.87□□□□□ -0.35
GAPVD1-220ENST00000497580 CDK15Q96Q40 435 aa12.87□□□□□ -0.35
GAPVD1-220ENST00000497580 CXCL16Q9H2A7 254 aa12.87□□□□□ -0.35
GAPVD1-220ENST00000497580 RGS18Q9NS28 235 aa12.87□□□□□ -0.35
GAPVD1-220ENST00000497580 ZNF487B1APH4 448 aa12.87□□□□□ -0.35
GAPVD1-220ENST00000497580 DCLK1O15075 740 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms