RNA–Protein interactions for RNA: ENST00000497149.1

VPS36-206, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 3

Gene VPS36, Length 364 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-206ENST00000497149 KCTD8Q6ZWB6 473 aa4.56□□□□□ -1.68
VPS36-206ENST00000497149 PLPPR4Q7Z2D5 763 aa4.56□□□□□ -1.68
VPS36-206ENST00000497149 PIWIL4Q7Z3Z4 852 aaKnown RBP4.56□□□□□ -1.68
VPS36-206ENST00000497149 PTOV1Q86YD1 416 aa4.56□□□□□ -1.68
VPS36-206ENST00000497149 AFAP1Q8N556 730 aa4.56□□□□□ -1.68
VPS36-206ENST00000497149 CD101Q93033 1021 aa4.56□□□□□ -1.68
VPS36-206ENST00000497149 SPACA9Q96E40 222 aaPredicted RBP4.56□□□□□ -1.68
VPS36-206ENST00000497149 PGAP3Q96FM1 320 aaPredicted RBP4.56□□□□□ -1.68
VPS36-206ENST00000497149 SLX1AQ9BQ83 275 aa4.56□□□□□ -1.68
VPS36-206ENST00000497149 MIOSQ9NXC5 875 aa4.56□□□□□ -1.68
VPS36-206ENST00000497149 NPAP1Q9NZP6 1156 aa4.56□□□□□ -1.68
VPS36-206ENST00000497149 NFKBIL1Q9UBC1 381 aaPredicted RBP4.56□□□□□ -1.68
VPS36-206ENST00000497149 RHCGQ9UBD6 479 aa4.56□□□□□ -1.68
VPS36-206ENST00000497149 TEX13DA0A0J9YY54 714 aaPredicted RBP4.55□□□□□ -1.68
VPS36-206ENST00000497149 PRSS51A0A1B0GVH4 220 aa4.55□□□□□ -1.68
VPS36-206ENST00000497149 IPO8O15397 1037 aaKnown RBP4.55□□□□□ -1.68
VPS36-206ENST00000497149 XRCC3O43542 346 aa4.55□□□□□ -1.68
VPS36-206ENST00000497149 SYNGR3O43761 229 aa4.55□□□□□ -1.68
VPS36-206ENST00000497149 LIPFP07098 398 aa4.55□□□□□ -1.68
VPS36-206ENST00000497149 CSF2RAP15509 400 aa4.55□□□□□ -1.68
VPS36-206ENST00000497149 MCCP23508 829 aa4.55□□□□□ -1.68
VPS36-206ENST00000497149 DNASE1P24855 282 aa4.55□□□□□ -1.68
VPS36-206ENST00000497149 MMP15P51511 669 aa4.55□□□□□ -1.68
VPS36-206ENST00000497149 CCR3P51677 355 aa4.55□□□□□ -1.68
VPS36-206ENST00000497149 PPP5CP53041 499 aa4.55□□□□□ -1.68
VPS36-206ENST00000497149 GAS1P54826 345 aa4.55□□□□□ -1.68
VPS36-206ENST00000497149 ERVFC1-1P60608 527 aa4.55□□□□□ -1.68
VPS36-206ENST00000497149 PITX1P78337 314 aaPredicted RBP4.55□□□□□ -1.68
VPS36-206ENST00000497149 GAGE5Q13069 117 aa4.55□□□□□ -1.68
VPS36-206ENST00000497149 GAGE6Q13070 117 aa4.55□□□□□ -1.68
VPS36-206ENST00000497149 PLA2G7Q13093 441 aa4.55□□□□□ -1.68
VPS36-206ENST00000497149 KYNUQ16719 465 aa4.55□□□□□ -1.68
VPS36-206ENST00000497149 CRY2Q49AN0 593 aa4.55□□□□□ -1.68
VPS36-206ENST00000497149 NDUFAF5Q5TEU4 345 aa4.55□□□□□ -1.68
VPS36-206ENST00000497149 WBP2NLQ6ICG8 309 aa4.55□□□□□ -1.68
VPS36-206ENST00000497149 KLC3Q6P597 504 aa4.55□□□□□ -1.68
VPS36-206ENST00000497149 PACS1Q6VY07 963 aa4.55□□□□□ -1.68
VPS36-206ENST00000497149 ZNF852Q6ZMS4 543 aa4.55□□□□□ -1.68
VPS36-206ENST00000497149 FOXL2NBQ6ZUU3 175 aa4.55□□□□□ -1.68
VPS36-206ENST00000497149 TMEM173Q86WV6 379 aaPredicted RBP4.55□□□□□ -1.68
VPS36-206ENST00000497149 RFLNBQ8N5W9 214 aa4.55□□□□□ -1.68
VPS36-206ENST00000497149 MAB21L3Q8N8X9 362 aa4.55□□□□□ -1.68
VPS36-206ENST00000497149 TDRD5Q8NAT2 981 aaKnown RBP4.55□□□□□ -1.68
VPS36-206ENST00000497149 PAPD5Q8NDF8 572 aaKnown RBP4.55□□□□□ -1.68
VPS36-206ENST00000497149 OR2AJ1Q8NGZ0 328 aa4.55□□□□□ -1.68
VPS36-206ENST00000497149 ZFAND2BQ8WV99 257 aa4.55□□□□□ -1.68
VPS36-206ENST00000497149 ZNF830Q96NB3 372 aaPredicted RBP4.55□□□□□ -1.68
VPS36-206ENST00000497149 OLFM1Q99784 485 aa4.55□□□□□ -1.68
VPS36-206ENST00000497149 GPR88Q9GZN0 384 aa4.55□□□□□ -1.68
VPS36-206ENST00000497149 ZNF556Q9HAH1 456 aa4.55□□□□□ -1.68
VPS36-206ENST00000497149 ABCF3Q9NUQ8 709 aa4.55□□□□□ -1.68
VPS36-206ENST00000497149 OLAHQ9NV23 265 aa4.55□□□□□ -1.68
VPS36-206ENST00000497149 BCCIPQ9P287 314 aaKnown RBP eCLIP4.55□□□□□ -1.68
VPS36-206ENST00000497149 DDX25Q9UHL0 483 aaKnown RBP4.55□□□□□ -1.68
VPS36-206ENST00000497149 ELOVL7A1L3X0 281 aa4.54□□□□□ -1.68
VPS36-206ENST00000497149 KRTAP29-1A8MX34 341 aaPredicted RBP4.54□□□□□ -1.68
VPS36-206ENST00000497149 C16orf97H3BN30 126 aa4.54□□□□□ -1.68
VPS36-206ENST00000497149 TSPAN1O60635 241 aa4.54□□□□□ -1.68
VPS36-206ENST00000497149 MED24O75448 989 aa4.54□□□□□ -1.68
VPS36-206ENST00000497149 PDE9AO76083 593 aa4.54□□□□□ -1.68
VPS36-206ENST00000497149 BAG4O95429 457 aaKnown RBP4.54□□□□□ -1.68
VPS36-206ENST00000497149 PFKFB1P16118 471 aa4.54□□□□□ -1.68
VPS36-206ENST00000497149 FMO5P49326 533 aa4.54□□□□□ -1.68
VPS36-206ENST00000497149 PRKAA1Q13131 559 aa4.54□□□□□ -1.68
VPS36-206ENST00000497149 DUOXA1Q1HG43 343 aa4.54□□□□□ -1.68
VPS36-206ENST00000497149 PDSS1Q5T2R2 415 aa4.54□□□□□ -1.68
VPS36-206ENST00000497149 C9orf139Q6ZV77 190 aa4.54□□□□□ -1.68
VPS36-206ENST00000497149 ZNF771Q7L3S4 317 aaPredicted RBP4.54□□□□□ -1.68
VPS36-206ENST00000497149 CAMKMTQ7Z624 323 aa4.54□□□□□ -1.68
VPS36-206ENST00000497149 LONP2Q86WA8 852 aa4.54□□□□□ -1.68
VPS36-206ENST00000497149 DCP1BQ8IZD4 617 aaKnown RBP4.54□□□□□ -1.68
VPS36-206ENST00000497149 TC2NQ8N9U0 490 aa4.54□□□□□ -1.68
VPS36-206ENST00000497149 KBTBD3Q8NAB2 608 aa4.54□□□□□ -1.68
VPS36-206ENST00000497149 OR13A1Q8NGR1 328 aa4.54□□□□□ -1.68
VPS36-206ENST00000497149 MOSPD2Q8NHP6 518 aa4.54□□□□□ -1.68
VPS36-206ENST00000497149 EXD1Q8NHP7 514 aa4.54□□□□□ -1.68
VPS36-206ENST00000497149 DAZLQ92904 295 aaKnown RBP4.54□□□□□ -1.68
VPS36-206ENST00000497149 MS4A10Q96PG2 267 aa4.54□□□□□ -1.68
VPS36-206ENST00000497149 CTAGE1Q96RT6 745 aa4.54□□□□□ -1.68
VPS36-206ENST00000497149 EQTNQ9NQ60 294 aa4.54□□□□□ -1.68
VPS36-206ENST00000497149 WDR35Q9P2L0 1181 aa4.54□□□□□ -1.68
VPS36-206ENST00000497149 ZNF580Q9UK33 172 aa4.54□□□□□ -1.68
VPS36-206ENST00000497149 IGLV5-45A0A087WSX0 123 aa4.53□□□□□ -1.68
VPS36-206ENST00000497149 A0A0B4J293 547 aa4.53□□□□□ -1.68
VPS36-206ENST00000497149 TRBC2A0A5B9 178 aa4.53□□□□□ -1.68
VPS36-206ENST00000497149 ANKUB1A6NFN9 424 aa4.53□□□□□ -1.68
VPS36-206ENST00000497149 CAPN9O14815 690 aa4.53□□□□□ -1.68
VPS36-206ENST00000497149 BUB3O43684 328 aa4.53□□□□□ -1.68
VPS36-206ENST00000497149 DKC1O60832 514 aaKnown RBP eCLIP4.53□□□□□ -1.68
VPS36-206ENST00000497149 CTSVO60911 334 aa4.53□□□□□ -1.68
VPS36-206ENST00000497149 TBX10O75333 385 aa4.53□□□□□ -1.68
VPS36-206ENST00000497149 TOMM70O94826 608 aa4.53□□□□□ -1.68
VPS36-206ENST00000497149 TRUB2O95900 331 aaKnown RBP4.53□□□□□ -1.68
VPS36-206ENST00000497149 IGHV4-39P01824 125 aa4.53□□□□□ -1.68
VPS36-206ENST00000497149 F7P08709 466 aaPredicted RBP4.53□□□□□ -1.68
VPS36-206ENST00000497149 PSMC4P43686 418 aa4.53□□□□□ -1.68
VPS36-206ENST00000497149 HOXA1P49639 335 aaPredicted RBP4.53□□□□□ -1.68
VPS36-206ENST00000497149 RPL36AP83881 106 aaKnown RBP4.53□□□□□ -1.68
VPS36-206ENST00000497149 PNRC1Q12796 327 aaPredicted RBP4.53□□□□□ -1.68
VPS36-206ENST00000497149 LETM2Q2VYF4 491 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms