RNA–Protein interactions for RNA: ENST00000496024.1

CALD1-223, Transcript of caldesmon 1, humanhuman

TSL 4

Gene CALD1, Length 557 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-223ENST00000496024 KIF2AO00139 706 aaPredicted RBP9.61□□□□□ -0.87
CALD1-223ENST00000496024 PRMT5O14744 637 aaPredicted RBP9.61□□□□□ -0.87
CALD1-223ENST00000496024 CPNE6O95741 557 aa9.61□□□□□ -0.87
CALD1-223ENST00000496024 MPOP05164 745 aa9.61□□□□□ -0.87
CALD1-223ENST00000496024 HOXB3P14651 431 aaPredicted RBP9.61□□□□□ -0.87
CALD1-223ENST00000496024 AMD1P17707 334 aa9.61□□□□□ -0.87
CALD1-223ENST00000496024 PGAM1P18669 254 aa9.61□□□□□ -0.87
CALD1-223ENST00000496024 FMO4P31512 558 aa9.61□□□□□ -0.87
CALD1-223ENST00000496024 CSF2RBP32927 897 aa9.61□□□□□ -0.87
CALD1-223ENST00000496024 ELK3P41970 407 aa9.61□□□□□ -0.87
CALD1-223ENST00000496024 ARCN1P48444 511 aaKnown RBP9.61□□□□□ -0.87
CALD1-223ENST00000496024 INHBCP55103 352 aa9.61□□□□□ -0.87
CALD1-223ENST00000496024 ARL4CP56559 192 aa9.61□□□□□ -0.87
CALD1-223ENST00000496024 SLC7A5Q01650 507 aa9.61□□□□□ -0.87
CALD1-223ENST00000496024 CYP4F3Q08477 520 aa9.61□□□□□ -0.87
CALD1-223ENST00000496024 CALCOCO2Q13137 446 aa9.61□□□□□ -0.87
CALD1-223ENST00000496024 CAMK2BQ13554 666 aa9.61□□□□□ -0.87
CALD1-223ENST00000496024 GPR18Q14330 331 aa9.61□□□□□ -0.87
CALD1-223ENST00000496024 HIF1AQ16665 826 aa9.61□□□□□ -0.87
CALD1-223ENST00000496024 LONRF1Q17RB8 773 aa9.61□□□□□ -0.87
CALD1-223ENST00000496024 WHAMMP3Q1A5X7 153 aa9.61□□□□□ -0.87
CALD1-223ENST00000496024 ZNF789Q5FWF6 425 aa9.61□□□□□ -0.87
CALD1-223ENST00000496024 C3orf38Q5JPI3 329 aa9.61□□□□□ -0.87
CALD1-223ENST00000496024 ZNF470Q6ECI4 717 aa9.61□□□□□ -0.87
CALD1-223ENST00000496024 XKR5Q6UX68 686 aa9.61□□□□□ -0.87
CALD1-223ENST00000496024 TMEM26Q6ZUK4 368 aa9.61□□□□□ -0.87
CALD1-223ENST00000496024 TMEM135Q86UB9 458 aa9.61□□□□□ -0.87
CALD1-223ENST00000496024 AVL9Q8NBF6 648 aa9.61□□□□□ -0.87
CALD1-223ENST00000496024 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.61□□□□□ -0.87
CALD1-223ENST00000496024 RCBTB1Q8NDN9 531 aa9.61□□□□□ -0.87
CALD1-223ENST00000496024 PHC3Q8NDX5 983 aa9.61□□□□□ -0.87
CALD1-223ENST00000496024 KIF18AQ8NI77 898 aa9.61□□□□□ -0.87
CALD1-223ENST00000496024 MDM1Q8TC05 714 aa9.61□□□□□ -0.87
CALD1-223ENST00000496024 LKAAEAR1Q8TD35 194 aa9.61□□□□□ -0.87
CALD1-223ENST00000496024 FAM136AQ96C01 138 aa9.61□□□□□ -0.87
CALD1-223ENST00000496024 SGSM3Q96HU1 749 aa9.61□□□□□ -0.87
CALD1-223ENST00000496024 EBNA1BP2Q99848 306 aaKnown RBP9.61□□□□□ -0.87
CALD1-223ENST00000496024 LDHAL6BQ9BYZ2 381 aaPredicted RBP9.61□□□□□ -0.87
CALD1-223ENST00000496024 SLC40A1Q9NP59 571 aa9.61□□□□□ -0.87
CALD1-223ENST00000496024 FBXO6Q9NRD1 293 aaPredicted RBP9.61□□□□□ -0.87
CALD1-223ENST00000496024 IARS2Q9NSE4 1012 aaKnown RBP9.61□□□□□ -0.87
CALD1-223ENST00000496024 POT1Q9NUX5 634 aa9.61□□□□□ -0.87
CALD1-223ENST00000496024 TMEM9Q9P0T7 183 aa9.61□□□□□ -0.87
CALD1-223ENST00000496024 KLHL3Q9UH77 587 aa9.61□□□□□ -0.87
CALD1-223ENST00000496024 TSR3Q9UJK0 312 aaKnown RBP9.61□□□□□ -0.87
CALD1-223ENST00000496024 UTP11Q9Y3A2 253 aaKnown RBP9.61□□□□□ -0.87
CALD1-223ENST00000496024 URB1O60287 2271 aaKnown RBP9.61□□□□□ -0.87
CALD1-223ENST00000496024 ANKRD11Q6UB99 2663 aaPredicted RBP9.6□□□□□ -0.87
CALD1-223ENST00000496024 ASPMQ8IZT6 3477 aa9.6□□□□□ -0.87
CALD1-223ENST00000496024 C17orf113A0A1B0GUU1 675 aa9.6□□□□□ -0.87
CALD1-223ENST00000496024 PMS2P1A4D2B8 440 aa9.6□□□□□ -0.87
CALD1-223ENST00000496024 KLHL33A6NCF5 533 aa9.6□□□□□ -0.87
CALD1-223ENST00000496024 A8MU76 341 aa9.6□□□□□ -0.87
CALD1-223ENST00000496024 SMAPO00193 183 aa9.6□□□□□ -0.87
CALD1-223ENST00000496024 QSOX1O00391 747 aa9.6□□□□□ -0.87
CALD1-223ENST00000496024 IFRD1O00458 451 aaPredicted RBP9.6□□□□□ -0.87
CALD1-223ENST00000496024 PFDN6O15212 129 aa9.6□□□□□ -0.87
CALD1-223ENST00000496024 TP73O15350 636 aa9.6□□□□□ -0.87
CALD1-223ENST00000496024 DUX1O43812 170 aa9.6□□□□□ -0.87
CALD1-223ENST00000496024 USP1O94782 785 aa9.6□□□□□ -0.87
CALD1-223ENST00000496024 UBXN7O94888 489 aa9.6□□□□□ -0.87
CALD1-223ENST00000496024 PROS1P07225 676 aa9.6□□□□□ -0.87
CALD1-223ENST00000496024 ERVK-10P10266 1014 aa9.6□□□□□ -0.87
CALD1-223ENST00000496024 MTHFD1P11586 935 aaKnown RBP9.6□□□□□ -0.87
CALD1-223ENST00000496024 PDX1P52945 283 aa9.6□□□□□ -0.87
CALD1-223ENST00000496024 GABREP78334 506 aa9.6□□□□□ -0.87
CALD1-223ENST00000496024 GPLD1P80108 840 aa9.6□□□□□ -0.87
CALD1-223ENST00000496024 CFHR1Q03591 330 aa9.6□□□□□ -0.87
CALD1-223ENST00000496024 HSPA14Q0VDF9 509 aa9.6□□□□□ -0.87
CALD1-223ENST00000496024 PDIA2Q13087 525 aaKnown RBP9.6□□□□□ -0.87
CALD1-223ENST00000496024 CTBP1Q13363 440 aa9.6□□□□□ -0.87
CALD1-223ENST00000496024 CRYMQ14894 314 aa9.6□□□□□ -0.87
CALD1-223ENST00000496024 NR1D2Q14995 579 aa9.6□□□□□ -0.87
CALD1-223ENST00000496024 PLCL1Q15111 1095 aa9.6□□□□□ -0.87
CALD1-223ENST00000496024 ZNF658BQ4V348 819 aaPredicted RBP9.6□□□□□ -0.87
CALD1-223ENST00000496024 HSP90AA5PQ58FG0 334 aa9.6□□□□□ -0.87
CALD1-223ENST00000496024 ARMC3Q5W041 872 aa9.6□□□□□ -0.87
CALD1-223ENST00000496024 DUPD1Q68J44 220 aa9.6□□□□□ -0.87
CALD1-223ENST00000496024 C8orf74Q6P047 294 aa9.6□□□□□ -0.87
CALD1-223ENST00000496024 ZNF574Q6ZN55 896 aaPredicted RBP9.6□□□□□ -0.87
CALD1-223ENST00000496024 CAPN12Q6ZSI9 719 aa9.6□□□□□ -0.87
CALD1-223ENST00000496024 ZNF572Q7Z3I7 529 aaPredicted RBP9.6□□□□□ -0.87
CALD1-223ENST00000496024 KCNMB4Q86W47 210 aa9.6□□□□□ -0.87
CALD1-223ENST00000496024 CILP2Q8IUL8 1156 aa9.6□□□□□ -0.87
CALD1-223ENST00000496024 DENND6AQ8IWF6 608 aa9.6□□□□□ -0.87
CALD1-223ENST00000496024 CACTIN-AS1Q8N1I8 211 aa9.6□□□□□ -0.87
CALD1-223ENST00000496024 BBOF1Q8ND07 529 aa9.6□□□□□ -0.87
CALD1-223ENST00000496024 LPGAT1Q92604 370 aa9.6□□□□□ -0.87
CALD1-223ENST00000496024 TMEM159Q96B96 161 aa9.6□□□□□ -0.87
CALD1-223ENST00000496024 NXPE2Q96DL1 559 aa9.6□□□□□ -0.87
CALD1-223ENST00000496024 CCDC74BQ96LY2 380 aa9.6□□□□□ -0.87
CALD1-223ENST00000496024 TMEM74Q96NL1 305 aa9.6□□□□□ -0.87
CALD1-223ENST00000496024 FERD3LQ96RJ6 166 aa9.6□□□□□ -0.87
CALD1-223ENST00000496024 LRRC1Q9BTT6 524 aa9.6□□□□□ -0.87
CALD1-223ENST00000496024 TSSK1BQ9BXA7 367 aa9.6□□□□□ -0.87
CALD1-223ENST00000496024 TMEM121BQ9BXQ6 578 aaPredicted RBP9.6□□□□□ -0.87
CALD1-223ENST00000496024 STRADBQ9C0K7 418 aa9.6□□□□□ -0.87
CALD1-223ENST00000496024 RAB17Q9H0T7 212 aa9.6□□□□□ -0.87
CALD1-223ENST00000496024 P2RY12Q9H244 342 aa9.6□□□□□ -0.87
CALD1-223ENST00000496024 CCDC86Q9H6F5 360 aaKnown RBP9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms