RNA–Protein interactions for RNA: ENST00000495630.1

TMEM53-209, Transcript of transmembrane protein 53, humanhuman

TSL 2

Gene TMEM53, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-209ENST00000495630 FAM153AQ9UHL3 310 aa17.1■□□□□ 0.33
TMEM53-209ENST00000495630 CFAP20Q9Y6A4 193 aaKnown RBP17.1■□□□□ 0.33
TMEM53-209ENST00000495630 COLEC10Q9Y6Z7 277 aa17.1■□□□□ 0.33
TMEM53-209ENST00000495630 GLYATL1P3A0A0U1RQE8 302 aa17.09■□□□□ 0.33
TMEM53-209ENST00000495630 MGAT4DA6NG13 374 aa17.09■□□□□ 0.33
TMEM53-209ENST00000495630 C3orf70A6NLC5 250 aaPredicted RBP17.09■□□□□ 0.33
TMEM53-209ENST00000495630 OR2AG2A6NM03 316 aa17.09■□□□□ 0.33
TMEM53-209ENST00000495630 CLDN1O95832 211 aa17.09■□□□□ 0.33
TMEM53-209ENST00000495630 LDLRP01130 860 aa17.09■□□□□ 0.33
TMEM53-209ENST00000495630 CAPN1P07384 714 aa17.09■□□□□ 0.33
TMEM53-209ENST00000495630 MSL3P1P0C860 447 aa17.09■□□□□ 0.33
TMEM53-209ENST00000495630 COL8A1P27658 744 aa17.09■□□□□ 0.33
TMEM53-209ENST00000495630 DCTP40126 519 aa17.09■□□□□ 0.33
TMEM53-209ENST00000495630 ADCY2Q08462 1091 aa17.09■□□□□ 0.33
TMEM53-209ENST00000495630 ITGA9Q13797 1035 aa17.09■□□□□ 0.33
TMEM53-209ENST00000495630 PLEKHN1Q494U1 663 aaPredicted RBP17.09■□□□□ 0.33
TMEM53-209ENST00000495630 GPRC6AQ5T6X5 926 aa17.09■□□□□ 0.33
TMEM53-209ENST00000495630 PRAMEF17Q5VTA0 474 aa17.09■□□□□ 0.33
TMEM53-209ENST00000495630 SNRNP40Q96DI7 357 aaKnown RBP17.09■□□□□ 0.33
TMEM53-209ENST00000495630 IQCDQ96DY2 449 aa17.09■□□□□ 0.33
TMEM53-209ENST00000495630 C12orf66Q96MD2 445 aa17.09■□□□□ 0.33
TMEM53-209ENST00000495630 WWP1Q9H0M0 922 aa17.09■□□□□ 0.33
TMEM53-209ENST00000495630 UBP1Q9NZI7 540 aa17.09■□□□□ 0.33
TMEM53-209ENST00000495630 ERRFI1Q9UJM3 462 aaPredicted RBP17.09■□□□□ 0.33
TMEM53-209ENST00000495630 SERTAD3Q9UJW9 196 aa17.09■□□□□ 0.33
TMEM53-209ENST00000495630 NENFQ9UMX5 172 aa17.09■□□□□ 0.33
TMEM53-209ENST00000495630 SLC9B1P1A6NJY1 282 aa17.08■□□□□ 0.32
TMEM53-209ENST00000495630 PYGMP11217 842 aa17.08■□□□□ 0.32
TMEM53-209ENST00000495630 NDUFS1P28331 727 aa17.08■□□□□ 0.32
TMEM53-209ENST00000495630 TNNT3P45378 269 aaPredicted RBP17.08■□□□□ 0.32
TMEM53-209ENST00000495630 WNT3AP56704 352 aa17.08■□□□□ 0.32
TMEM53-209ENST00000495630 PRKAA1Q13131 559 aa17.08■□□□□ 0.32
TMEM53-209ENST00000495630 SIRPB2Q5JXA9 342 aa17.08■□□□□ 0.32
TMEM53-209ENST00000495630 FNBP1LQ5T0N5 605 aa17.08■□□□□ 0.32
TMEM53-209ENST00000495630 NPNTQ6UXI9 565 aa17.08■□□□□ 0.32
TMEM53-209ENST00000495630 FAM151BQ6UXP7 276 aa17.08■□□□□ 0.32
TMEM53-209ENST00000495630 IQCKQ8N0W5 287 aa17.08■□□□□ 0.32
TMEM53-209ENST00000495630 OR2L2Q8NH16 312 aa17.08■□□□□ 0.32
TMEM53-209ENST00000495630 CPLX3Q8WVH0 158 aa17.08■□□□□ 0.32
TMEM53-209ENST00000495630 CTNNBL1Q8WYA6 563 aaPredicted RBP17.08■□□□□ 0.32
TMEM53-209ENST00000495630 C19orf60Q96EN9 201 aa17.08■□□□□ 0.32
TMEM53-209ENST00000495630 TCTN2Q96GX1 697 aa17.08■□□□□ 0.32
TMEM53-209ENST00000495630 SGSM3Q96HU1 749 aa17.08■□□□□ 0.32
TMEM53-209ENST00000495630 DPH2Q9BQC3 489 aaPredicted RBP17.08■□□□□ 0.32
TMEM53-209ENST00000495630 PCMTD2Q9NV79 361 aa17.08■□□□□ 0.32
TMEM53-209ENST00000495630 SMOXQ9NWM0 555 aa17.08■□□□□ 0.32
TMEM53-209ENST00000495630 SLC5A6Q9Y289 635 aa17.08■□□□□ 0.32
TMEM53-209ENST00000495630 LUC7L2Q9Y383 392 aaKnown RBP17.08■□□□□ 0.32
TMEM53-209ENST00000495630 PKP3Q9Y446 797 aa17.08■□□□□ 0.32
TMEM53-209ENST00000495630 HIVEP3Q5T1R4 2406 aa17.08■□□□□ 0.32
TMEM53-209ENST00000495630 CENPEQ02224 2701 aa17.07■□□□□ 0.32
TMEM53-209ENST00000495630 GOLGA6L22H0YM25 854 aa17.07■□□□□ 0.32
TMEM53-209ENST00000495630 MATN2O00339 956 aa17.07■□□□□ 0.32
TMEM53-209ENST00000495630 MAP3K7O43318 606 aa17.07■□□□□ 0.32
TMEM53-209ENST00000495630 KRT86O43790 486 aa17.07■□□□□ 0.32
TMEM53-209ENST00000495630 KLHL41O60662 606 aa17.07■□□□□ 0.32
TMEM53-209ENST00000495630 MBD3O95983 291 aa17.07■□□□□ 0.32
TMEM53-209ENST00000495630 POLR2CP19387 275 aaPredicted RBP17.07■□□□□ 0.32
TMEM53-209ENST00000495630 MSH3P20585 1137 aa17.07■□□□□ 0.32
TMEM53-209ENST00000495630 CDH3P22223 829 aa17.07■□□□□ 0.32
TMEM53-209ENST00000495630 PTPN3P26045 913 aa17.07■□□□□ 0.32
TMEM53-209ENST00000495630 PBLDP30039 288 aaPredicted RBP17.07■□□□□ 0.32
TMEM53-209ENST00000495630 CA5AP35218 305 aa17.07■□□□□ 0.32
TMEM53-209ENST00000495630 PBX1P40424 430 aa17.07■□□□□ 0.32
TMEM53-209ENST00000495630 ABRQ12979 859 aa17.07■□□□□ 0.32
TMEM53-209ENST00000495630 KRT33BQ14525 404 aa17.07■□□□□ 0.32
TMEM53-209ENST00000495630 MESDQ14696 234 aa17.07■□□□□ 0.32
TMEM53-209ENST00000495630 NR6A1Q15406 480 aa17.07■□□□□ 0.32
TMEM53-209ENST00000495630 VWA5B1Q5TIE3 1220 aa17.07■□□□□ 0.32
TMEM53-209ENST00000495630 FBXO38Q6PIJ6 1188 aa17.07■□□□□ 0.32
TMEM53-209ENST00000495630 KDELC1Q6UW63 502 aa17.07■□□□□ 0.32
TMEM53-209ENST00000495630 BZW1Q7L1Q6 419 aaKnown RBP17.07■□□□□ 0.32
TMEM53-209ENST00000495630 RAB43Q86YS6 212 aa17.07■□□□□ 0.32
TMEM53-209ENST00000495630 SYTL1Q8IYJ3 562 aa17.07■□□□□ 0.32
TMEM53-209ENST00000495630 SPDYE1Q8NFV5 336 aaPredicted RBP17.07■□□□□ 0.32
TMEM53-209ENST00000495630 OR4E2Q8NGC2 313 aa17.07■□□□□ 0.32
TMEM53-209ENST00000495630 ZNF398Q8TD17 642 aa17.07■□□□□ 0.32
TMEM53-209ENST00000495630 PPM1MQ96MI6 270 aa17.07■□□□□ 0.32
TMEM53-209ENST00000495630 IP6K3Q96PC2 410 aa17.07■□□□□ 0.32
TMEM53-209ENST00000495630 TLR10Q9BXR5 811 aa17.07■□□□□ 0.32
TMEM53-209ENST00000495630 ACTR5Q9H9F9 607 aaPredicted RBP17.07■□□□□ 0.32
TMEM53-209ENST00000495630 POMT2Q9UKY4 750 aa17.07■□□□□ 0.32
TMEM53-209ENST00000495630 B3GNT3Q9Y2A9 372 aa17.07■□□□□ 0.32
TMEM53-209ENST00000495630 HEBP2Q9Y5Z4 205 aa17.07■□□□□ 0.32
TMEM53-209ENST00000495630 DOPEY1Q5JWR5 2465 aa17.07■□□□□ 0.32
TMEM53-209ENST00000495630 GAPDHSO14556 408 aaPredicted RBP17.06■□□□□ 0.32
TMEM53-209ENST00000495630 LCA5LO95447 670 aa17.06■□□□□ 0.32
TMEM53-209ENST00000495630 HBQ1P09105 142 aa17.06■□□□□ 0.32
TMEM53-209ENST00000495630 SLC35G4P0C7Q5 338 aa17.06■□□□□ 0.32
TMEM53-209ENST00000495630 HLA-DPA1P20036 260 aa17.06■□□□□ 0.32
TMEM53-209ENST00000495630 CYP2A7P20853 494 aa17.06■□□□□ 0.32
TMEM53-209ENST00000495630 CD68P34810 354 aaPredicted RBP17.06■□□□□ 0.32
TMEM53-209ENST00000495630 HADHAP40939 763 aa17.06■□□□□ 0.32
TMEM53-209ENST00000495630 PREPP48147 710 aa17.06■□□□□ 0.32
TMEM53-209ENST00000495630 ARCN1P48444 511 aaKnown RBP17.06■□□□□ 0.32
TMEM53-209ENST00000495630 NR2C2P49116 596 aa17.06■□□□□ 0.32
TMEM53-209ENST00000495630 GSE1Q14687 1217 aa17.06■□□□□ 0.32
TMEM53-209ENST00000495630 NCF4Q15080 339 aa17.06■□□□□ 0.32
TMEM53-209ENST00000495630 ZRANB3Q5FWF4 1079 aa17.06■□□□□ 0.32
TMEM53-209ENST00000495630 ZNF789Q5FWF6 425 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms